| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is ycbX [H]
Identifier: 262192863
GI number: 262192863
Start: 1450322
End: 1451101
Strand: Direct
Name: ycbX [H]
Synonym: BMA10247_A1499
Alternate gene names: 262192863
Gene position: 1450322-1451101 (Clockwise)
Preceding gene: 126446062
Following gene: 126447368
Centisome position: 61.65
GC content: 71.54
Gene sequence:
>780_bases TTGCTAGAAGCCCATTGGCCCTATCGAAGGGGGCAGGTCACGATGCTCACGCAGCGCACGCACCCGCGACTCGCGCTCGT GCGCACGGCGATCGGCGAGCGCGAGCTCGTCGTCACCGCGGCAGGCATGCCCGAGTTGCGCACGCCGCTCGCGGCGTCGG CGCTCGCGGGGGCCGAGCGGCTCGCCGCAACCGTCTGGCGCGACACCGTGAGCGCGCTCGACACCGGCGCGCATGCGGCG CGCTGGTTCAGCGAGTTCCTCGGCGCGCCCGCGCGGCTCGCGCGCTTCGCGCCCGACGCGCGGCGCGTGGTGGGCGCGAA GTGGACGGGCCCGTTCACGTCGTACGCGCAATTCGCGGACGGCTTTCCGCTCCTCGTCGTCGGCCAGTCGTCGCTCGACG ACCTGAACGTGCGGCTGCGCCGCAAGGGCGCGAGCGCGGTACCGATGAACCGCTTCCGCCCGAACGTCGTGCTGGTGGGC CTCGACGCATACGAGGAAGACTACGTCGACTACCTCGACGTGCAGACGGGCGGCGGCGGCGTGCGCCTGAGCCTCGTCAA GCTGTGCACGCGCTGCCCGGTGCCGACGATCGACCAGCGCACGGGCGCGCCGGACCCGGCGTGGCCGAACGAGCCGACCG ACACGATGAGCCTCTATCGCGGCAGCAAGCAGTTCGGCGGCGCGCTGACGTTCGGCAAGAATGCGATCGTCTTGAACGGC GACGGCGCGTTCCTGGAAGTCGGGCAATCGGTCGATGCGGAGATCGCGTTCGGCGAGTGA
Upstream 100 bases:
>100_bases CACAGCGCACTGAACTACCTTGCGCCGTCAGAGTTTGCGGCGAAACATCGGGCAACCGCGGACGCTCCTGCCGCTTTCCA GGAGTTGGTTTAAAGGGACT
Downstream 100 bases:
>100_bases CTCGCGCCAATCGCGCGTGACGCGCGCGTATGTCCGACACACCGCTTGCGCCGCCACTCGCACCGCGCGACGCTGCCGTC ATTGACACCCCGCCGCCGGC
Product: MOSC domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 259; Mature: 259
Protein sequence:
>259_residues MLEAHWPYRRGQVTMLTQRTHPRLALVRTAIGERELVVTAAGMPELRTPLAASALAGAERLAATVWRDTVSALDTGAHAA RWFSEFLGAPARLARFAPDARRVVGAKWTGPFTSYAQFADGFPLLVVGQSSLDDLNVRLRRKGASAVPMNRFRPNVVLVG LDAYEEDYVDYLDVQTGGGGVRLSLVKLCTRCPVPTIDQRTGAPDPAWPNEPTDTMSLYRGSKQFGGALTFGKNAIVLNG DGAFLEVGQSVDAEIAFGE
Sequences:
>Translated_259_residues MLEAHWPYRRGQVTMLTQRTHPRLALVRTAIGERELVVTAAGMPELRTPLAASALAGAERLAATVWRDTVSALDTGAHAA RWFSEFLGAPARLARFAPDARRVVGAKWTGPFTSYAQFADGFPLLVVGQSSLDDLNVRLRRKGASAVPMNRFRPNVVLVG LDAYEEDYVDYLDVQTGGGGVRLSLVKLCTRCPVPTIDQRTGAPDPAWPNEPTDTMSLYRGSKQFGGALTFGKNAIVLNG DGAFLEVGQSVDAEIAFGE >Mature_259_residues MLEAHWPYRRGQVTMLTQRTHPRLALVRTAIGERELVVTAAGMPELRTPLAASALAGAERLAATVWRDTVSALDTGAHAA RWFSEFLGAPARLARFAPDARRVVGAKWTGPFTSYAQFADGFPLLVVGQSSLDDLNVRLRRKGASAVPMNRFRPNVVLVG LDAYEEDYVDYLDVQTGGGGVRLSLVKLCTRCPVPTIDQRTGAPDPAWPNEPTDTMSLYRGSKQFGGALTFGKNAIVLNG DGAFLEVGQSVDAEIAFGE
Specific function: Unknown
COG id: COG3217
COG function: function code R; Uncharacterized Fe-S protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 MOSC domain [H]
Homologues:
Organism=Homo sapiens, GI31542713, Length=210, Percent_Identity=33.3333333333333, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI224600454, Length=258, Percent_Identity=30.2325581395349, Blast_Score=96, Evalue=3e-20, Organism=Escherichia coli, GI1787179, Length=172, Percent_Identity=33.1395348837209, Blast_Score=81, Evalue=7e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006058 - InterPro: IPR012675 - InterPro: IPR001041 - InterPro: IPR005302 - InterPro: IPR005303 - InterPro: IPR011037 [H]
Pfam domain/function: PF00111 Fer2; PF03473 MOSC; PF03476 MOSC_N [H]
EC number: NA
Molecular weight: Translated: 28002; Mature: 28002
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEAHWPYRRGQVTMLTQRTHPRLALVRTAIGERELVVTAAGMPELRTPLAASALAGAER CCCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCCCHHHCHHHHHHHHHHHH LAATVWRDTVSALDTGAHAARWFSEFLGAPARLARFAPDARRVVGAKWTGPFTSYAQFAD HHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHC GFPLLVVGQSSLDDLNVRLRRKGASAVPMNRFRPNVVLVGLDAYEEDYVDYLDVQTGGGG CCCEEEECCCCCCCHHEEEEECCCCCCCHHHCCCCEEEEECCCCCCCCCEEEEEEECCCC VRLSLVKLCTRCPVPTIDQRTGAPDPAWPNEPTDTMSLYRGSKQFGGALTFGKNAIVLNG EEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHCCEEEECCCEEEECC DGAFLEVGQSVDAEIAFGE CCCEEEECCCCCCEEECCC >Mature Secondary Structure MLEAHWPYRRGQVTMLTQRTHPRLALVRTAIGERELVVTAAGMPELRTPLAASALAGAER CCCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCCCHHHCHHHHHHHHHHHH LAATVWRDTVSALDTGAHAARWFSEFLGAPARLARFAPDARRVVGAKWTGPFTSYAQFAD HHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHC GFPLLVVGQSSLDDLNVRLRRKGASAVPMNRFRPNVVLVGLDAYEEDYVDYLDVQTGGGG CCCEEEECCCCCCCHHEEEEECCCCCCCHHHCCCCEEEEECCCCCCCCCEEEEEEECCCC VRLSLVKLCTRCPVPTIDQRTGAPDPAWPNEPTDTMSLYRGSKQFGGALTFGKNAIVLNG EEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHCCEEEECCCEEEECC DGAFLEVGQSVDAEIAFGE CCCEEEECCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503 [H]