| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is 262192856
Identifier: 262192856
GI number: 262192856
Start: 2288185
End: 2289549
Strand: Reverse
Name: 262192856
Synonym: BMA10247_A2359
Alternate gene names: NA
Gene position: 2289549-2288185 (Counterclockwise)
Preceding gene: 126446936
Following gene: 126445958
Centisome position: 97.32
GC content: 72.31
Gene sequence:
>1365_bases ATGATGACCGATTTCGCGAAACCGGGGCGCGCGGCCCCGATCGACTGGCACGCGCATTTCGCGCGGCTCGCCGACGAGGC CGAGCAACTGAGGCGGCCGGGCGAGACGGTGCTGCTGTGGTTCGCCGGCGAGACGTCCGATTTCATCCGCTTCAACGCGG GCAAGGTACGCCAGACGGGGCGCGTCGTGCAGGGCAAGCTCGCCGTGCGGCTCGCGAGCGGCGGGCGGCAGGCGTCGTTT GCGCAGACGGTGAGCGGCGATTGGGCGACGGACGCGCCCGAGCTCGCCGCGGCGCTCGCGACGCTGCGCGAGAGCCTGCG TGACGCGTCCGACGATCCGCATCTGCTGTTCGACACGTCGTCGTGGCGGCAGTCGAGCCGCCGCGACGGCAGCCTGCCGG ACCCGGACGCGCTCGCGCACGTCGTGGCGGATGCCGCGCGCGGGCTCGACTTCGTCGGCTTCTACGCGGGCGGCTCGCTT GCGCGTGGCTTCGCGTCGTCGACGGGCAGCCGCGGCTGGTACGAGGTCGAGAATTTCGATTTCCGCTGGTCGCTGTACGA CGCGAGCGGCCGCGCGATCAAGACCGTCTATGCGGGCGAGAGCTGGAGCGACGCGGCGTTCGCGCGCAAGGTCGACGAGG CCGCCGCGCGCCTGCCGGCGCTCGGCCGCGCGCCGAAGGCGCTCGCGCCGGGCCGCTATCGCGCGTATCTCGCGCCGGCC GCGGTCGCGGAGATCGTCGGGCTGCTCGGCTGGGACGGCTTTTCCGCGCGCGCGAACGCGAGCGCGCGCAGCAGCCTGCA CCGGCTGCATGCGGGCGAGGCGGCGTTCGATCCGCGCGTGACGATCGCCGAGGATTTCTCGCTGGGCGTGGCGCCCGCGT TCAACGCGGACGGCTATCGGCGCGACAGCGTGCCGCTCGTCGCCGAAGGGCGCAGCGTCGGGCGGCTCGTCAGCGCGCGC ACCGCGCGCGAGCACGGCCTGAGCCCGAACGGCGCGGCCGCGGACGAAACGCCGGAGACTCTCTCGATCGCGGGCGGCGC GCTCGCCGACGCCGATGTGCTCGCGGCGCTCGATACGGGGCTCTATATCGGCAACCTCTGGTATCTGAATTTCTCGGACA AGATGAATGGGCGGATCACCGGAATGACGCGCTTCGCGACATTCTGGGTGGAGCGCGGCAGGATCGTCGCGCCGGTCGAC GCGATGCGCTTCGACGACAGCGTGTACCGCTTGCTCGGCGCCGAGCTCGAGCAGCTCGGCGCGGCCCCCGAACTGCTGCT CAACGATCAGTCCTGGAGCGAGCGCCCGACGGGCGGCGCGAAGCTGCCCGGCCTGCTCGCGCGCTCGTTCGAGCTGACGC TGTAA
Upstream 100 bases:
>100_bases GCACGCCATATTGCGGCAAGGGCGAGCCGGCGCAGATCGTCCGTGTCGGCCATGCGTCGCCCGCGTGCGTGTTCGCCGAC GTCGACGTGTTCGGAGGCGC
Downstream 100 bases:
>100_bases CGCGATGGAACGCGCCGCGACTTCGCCGCCGCCGCCCGACGTGGCGATCCGCGCGCTGCGCGCGGCGGATGCCGACGCGC TGCACGCGCTCGCGCGGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 454; Mature: 454
Protein sequence:
>454_residues MMTDFAKPGRAAPIDWHAHFARLADEAEQLRRPGETVLLWFAGETSDFIRFNAGKVRQTGRVVQGKLAVRLASGGRQASF AQTVSGDWATDAPELAAALATLRESLRDASDDPHLLFDTSSWRQSSRRDGSLPDPDALAHVVADAARGLDFVGFYAGGSL ARGFASSTGSRGWYEVENFDFRWSLYDASGRAIKTVYAGESWSDAAFARKVDEAAARLPALGRAPKALAPGRYRAYLAPA AVAEIVGLLGWDGFSARANASARSSLHRLHAGEAAFDPRVTIAEDFSLGVAPAFNADGYRRDSVPLVAEGRSVGRLVSAR TAREHGLSPNGAAADETPETLSIAGGALADADVLAALDTGLYIGNLWYLNFSDKMNGRITGMTRFATFWVERGRIVAPVD AMRFDDSVYRLLGAELEQLGAAPELLLNDQSWSERPTGGAKLPGLLARSFELTL
Sequences:
>Translated_454_residues MMTDFAKPGRAAPIDWHAHFARLADEAEQLRRPGETVLLWFAGETSDFIRFNAGKVRQTGRVVQGKLAVRLASGGRQASF AQTVSGDWATDAPELAAALATLRESLRDASDDPHLLFDTSSWRQSSRRDGSLPDPDALAHVVADAARGLDFVGFYAGGSL ARGFASSTGSRGWYEVENFDFRWSLYDASGRAIKTVYAGESWSDAAFARKVDEAAARLPALGRAPKALAPGRYRAYLAPA AVAEIVGLLGWDGFSARANASARSSLHRLHAGEAAFDPRVTIAEDFSLGVAPAFNADGYRRDSVPLVAEGRSVGRLVSAR TAREHGLSPNGAAADETPETLSIAGGALADADVLAALDTGLYIGNLWYLNFSDKMNGRITGMTRFATFWVERGRIVAPVD AMRFDDSVYRLLGAELEQLGAAPELLLNDQSWSERPTGGAKLPGLLARSFELTL >Mature_454_residues MMTDFAKPGRAAPIDWHAHFARLADEAEQLRRPGETVLLWFAGETSDFIRFNAGKVRQTGRVVQGKLAVRLASGGRQASF AQTVSGDWATDAPELAAALATLRESLRDASDDPHLLFDTSSWRQSSRRDGSLPDPDALAHVVADAARGLDFVGFYAGGSL ARGFASSTGSRGWYEVENFDFRWSLYDASGRAIKTVYAGESWSDAAFARKVDEAAARLPALGRAPKALAPGRYRAYLAPA AVAEIVGLLGWDGFSARANASARSSLHRLHAGEAAFDPRVTIAEDFSLGVAPAFNADGYRRDSVPLVAEGRSVGRLVSAR TAREHGLSPNGAAADETPETLSIAGGALADADVLAALDTGLYIGNLWYLNFSDKMNGRITGMTRFATFWVERGRIVAPVD AMRFDDSVYRLLGAELEQLGAAPELLLNDQSWSERPTGGAKLPGLLARSFELTL
Specific function: Unknown
COG id: COG0312
COG function: function code R; Predicted Zn-dependent proteases and their inactivated homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48737; Mature: 48737
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMTDFAKPGRAAPIDWHAHFARLADEAEQLRRPGETVLLWFAGETSDFIRFNAGKVRQTG CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEECCCCHHHCC RVVQGKLAVRLASGGRQASFAQTVSGDWATDAPELAAALATLRESLRDASDDPHLLFDTS CEEECEEEEEEECCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECH SWRQSSRRDGSLPDPDALAHVVADAARGLDFVGFYAGGSLARGFASSTGSRGWYEVENFD HHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHCCCCCCCEEEECCCE FRWSLYDASGRAIKTVYAGESWSDAAFARKVDEAAARLPALGRAPKALAPGRYRAYLAPA EEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECHH AVAEIVGLLGWDGFSARANASARSSLHRLHAGEAAFDPRVTIAEDFSLGVAPAFNADGYR HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCC RDSVPLVAEGRSVGRLVSARTAREHGLSPNGAAADETPETLSIAGGALADADVLAALDTG CCCCCEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHCC LYIGNLWYLNFSDKMNGRITGMTRFATFWVERGRIVAPVDAMRFDDSVYRLLGAELEQLG EEEEEEEEEEECCCCCCEEEHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHHHHHC AAPELLLNDQSWSERPTGGAKLPGLLARSFELTL CCCCEEECCCCCCCCCCCCCCCCHHHHHCEEECC >Mature Secondary Structure MMTDFAKPGRAAPIDWHAHFARLADEAEQLRRPGETVLLWFAGETSDFIRFNAGKVRQTG CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEECCCCHHHCC RVVQGKLAVRLASGGRQASFAQTVSGDWATDAPELAAALATLRESLRDASDDPHLLFDTS CEEECEEEEEEECCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECH SWRQSSRRDGSLPDPDALAHVVADAARGLDFVGFYAGGSLARGFASSTGSRGWYEVENFD HHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHCCCCCCCEEEECCCE FRWSLYDASGRAIKTVYAGESWSDAAFARKVDEAAARLPALGRAPKALAPGRYRAYLAPA EEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECHH AVAEIVGLLGWDGFSARANASARSSLHRLHAGEAAFDPRVTIAEDFSLGVAPAFNADGYR HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCC RDSVPLVAEGRSVGRLVSARTAREHGLSPNGAAADETPETLSIAGGALADADVLAALDTG CCCCCEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHCC LYIGNLWYLNFSDKMNGRITGMTRFATFWVERGRIVAPVDAMRFDDSVYRLLGAELEQLG EEEEEEEEEEECCCCCCEEEHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHHHHHC AAPELLLNDQSWSERPTGGAKLPGLLARSFELTL CCCCEEECCCCCCCCCCCCCCCCHHHHHCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA