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The map label for this gene is insK [C]

Identifier: 262192848

GI number: 262192848

Start: 1818769

End: 1819476

Strand: Reverse

Name: insK [C]

Synonym: BMA10247_A1888

Alternate gene names: 262192848

Gene position: 1819476-1818769 (Counterclockwise)

Preceding gene: 262192895

Following gene: 126446220

Centisome position: 77.34

GC content: 61.44

Gene sequence:

>708_bases
TTGCGGTTATACAGATCGATGTATTCGCCGATGGAACGCCGGGCGCTGATTGAGGAGTCGCCGTCGTTCGGGTATCGGAC
GCTCGCGCATTTGCTTGGGTTCAACAAGAACACGGTGCAGCGAATCTTCCGATTGATGGGCTGGCAGGTTCGGATGCGGC
CGATTGGCTTTCGGCCTCGCGTACAAGCCATGCCGTCGGTGGCCACAGCGCCGAACGAACGCGGGTCGACCGATATGTGC
CGCGTTTGGGCTGGGCGTGATGGGTGGGTGACGCTGGCGCGGGTGATCGATTGCCATACGCGGGAGTTGCTAGGCTGGCA
TTTGTCACGTAGCGGTAGGGCCAGCACAGCCTCGAGCGCGTTGGAGCATGCGCGGATCGCTCGGTTCGGCACACTCGGGC
GTGTGCCTAAGCCGTTCCTGCTGAGAGGCGACAACGGGCTAGTCTTTACCAGCCGCGACTACACGGCTCTGGTACGCAGT
TACGGTCTGCGGCAGGCGTTCATCACGCCGCACTGTCCGCAACAGAACGGAATGGTCGAGCGCGTGATCCGCACGCTCAA
GGAGCAATGCGTACACCGACACCGCTTCGAGACGCTGCAGCATGCCAGCCGCGCCATTGCCGACTGGATCCAGTTTTACA
ACCATCGACGGCCTCATCAGGCGCTGAAGATGAAAACGCCGGCTGAGGCATTCGCGTTAGCCGCTTAA

Upstream 100 bases:

>100_bases
GAAGTGCCGCGCTACAAACCGCGTGAACCGCGACCAACCAGGCTCGGAGCGTTCGAGGCGTACATCCGGCGTCTGATCCG
CGAGACTCGAATGGGGCCGT

Downstream 100 bases:

>100_bases
CCTGAGCAGGTTCCGTTGGATCATTACACCTCTACCTAGCCGGCGCGACGAAATTGAGCAGTACCGCAGCGGTCGTAAGC
GGTTCGCCCATGAAGTAGAT

Product: integrase core subunit

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MRLYRSMYSPMERRALIEESPSFGYRTLAHLLGFNKNTVQRIFRLMGWQVRMRPIGFRPRVQAMPSVATAPNERGSTDMC
RVWAGRDGWVTLARVIDCHTRELLGWHLSRSGRASTASSALEHARIARFGTLGRVPKPFLLRGDNGLVFTSRDYTALVRS
YGLRQAFITPHCPQQNGMVERVIRTLKEQCVHRHRFETLQHASRAIADWIQFYNHRRPHQALKMKTPAEAFALAA

Sequences:

>Translated_235_residues
MRLYRSMYSPMERRALIEESPSFGYRTLAHLLGFNKNTVQRIFRLMGWQVRMRPIGFRPRVQAMPSVATAPNERGSTDMC
RVWAGRDGWVTLARVIDCHTRELLGWHLSRSGRASTASSALEHARIARFGTLGRVPKPFLLRGDNGLVFTSRDYTALVRS
YGLRQAFITPHCPQQNGMVERVIRTLKEQCVHRHRFETLQHASRAIADWIQFYNHRRPHQALKMKTPAEAFALAA
>Mature_235_residues
MRLYRSMYSPMERRALIEESPSFGYRTLAHLLGFNKNTVQRIFRLMGWQVRMRPIGFRPRVQAMPSVATAPNERGSTDMC
RVWAGRDGWVTLARVIDCHTRELLGWHLSRSGRASTASSALEHARIARFGTLGRVPKPFLLRGDNGLVFTSRDYTALVRS
YGLRQAFITPHCPQQNGMVERVIRTLKEQCVHRHRFETLQHASRAIADWIQFYNHRRPHQALKMKTPAEAFALAA

Specific function: Involved in the transposition of the insertion sequence is150 [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1789981, Length=222, Percent_Identity=27.027027027027, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1788405, Length=163, Percent_Identity=27.6073619631902, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1787263, Length=163, Percent_Identity=27.6073619631902, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1786753, Length=163, Percent_Identity=27.6073619631902, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1786570, Length=163, Percent_Identity=27.6073619631902, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1786490, Length=163, Percent_Identity=27.6073619631902, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 27073; Mature: 27073

Theoretical pI: Translated: 11.82; Mature: 11.82

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLYRSMYSPMERRALIEESPSFGYRTLAHLLGFNKNTVQRIFRLMGWQVRMRPIGFRPR
CCHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCEEEECCCCCCCH
VQAMPSVATAPNERGSTDMCRVWAGRDGWVTLARVIDCHTRELLGWHLSRSGRASTASSA
HHHCCCHHCCCCCCCCCHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
LEHARIARFGTLGRVPKPFLLRGDNGLVFTSRDYTALVRSYGLRQAFITPHCPQQNGMVE
HHHHHHHHHHHCCCCCCCEEEECCCCEEEECCHHHHHHHHHCCHHHCCCCCCCCCCCHHH
RVIRTLKEQCVHRHRFETLQHASRAIADWIQFYNHRRPHQALKMKTPAEAFALAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHCCC
>Mature Secondary Structure
MRLYRSMYSPMERRALIEESPSFGYRTLAHLLGFNKNTVQRIFRLMGWQVRMRPIGFRPR
CCHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCEEEECCCCCCCH
VQAMPSVATAPNERGSTDMCRVWAGRDGWVTLARVIDCHTRELLGWHLSRSGRASTASSA
HHHCCCHHCCCCCCCCCHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
LEHARIARFGTLGRVPKPFLLRGDNGLVFTSRDYTALVRSYGLRQAFITPHCPQQNGMVE
HHHHHHHHHHHCCCCCCCEEEECCCCEEEECCHHHHHHHHHCCHHHCCCCCCCCCCCHHH
RVIRTLKEQCVHRHRFETLQHASRAIADWIQFYNHRRPHQALKMKTPAEAFALAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1718819 [H]