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The map label for this gene is gdhII [H]

Identifier: 126447934

GI number: 126447934

Start: 1647255

End: 1648031

Strand: Reverse

Name: gdhII [H]

Synonym: BMA10247_A1712

Alternate gene names: 126447934

Gene position: 1648031-1647255 (Counterclockwise)

Preceding gene: 126447652

Following gene: 126445619

Centisome position: 70.05

GC content: 74.0

Gene sequence:

>777_bases
ATGACGATCGATACGGTGTCATCCCGTTCCATTCCGCTCGCGTGGATCGCGGGCGTCGGCGCAAGCGCCGGGCTCGGCGC
GGCGCTTGGCCGGCGCTTCGCGCGCGGCGGCTACGCCGTCGTGCTGAGCGGGCGCACGCACGAGCGCGTCGCCGCGGTCG
CCGACGAAATCCGCGCGCAAGGCGGCGTCGCGCACGTCGCGAGCGGCGACATCGCGAGCGAAGCCGATGTCGAGCGGCTC
GCGATCGAGGTGCGCACGCTCGGCGCGCTGCGGGCCGCCGTGTTCAACGCGGGCAACGCGGTTCGCGCGCCGACGCTCGA
GCTGAGCGTCGCGCAATTCGAGCACGCGTGGCGCACGAACGTGATCGGCGGCTTCCTGTTCGCGAAGGCGGCGCTTGCGC
AACTGCTCGACGCAGACGGCGGCGCGCCGGGCGACGACACGCCGCGCAGCCTGCTGTTCACGGGCGCGACCGCATCGCTG
CGCGGCCGCCCGCCGTTCGCCGCGTTCGCGTCGGCGAAGGCGGGGCTGCGCTCGCTCGCCCAGACGCTTGCGCGCGAGTT
CGGCCCGCGCGGCGTTCACGTCGCGCATGCGGTGATCGACGGCGGCATCGACGGCGAGCGGCTGCGCGGCGCGGCGCCCG
AGCGCGTCGCGCAAGCGGGCGCCGACGGGCTGCTGTCGCCCGACGCGATCGCCGACAGCTACTGGCAACTGCACGTGCAG
CACCGCAGCGCGTGGACGCAGGAACTCGATTTGCGCCCGTACAACGAAGCGTTCTGA

Upstream 100 bases:

>100_bases
GCTCAACGCTCCATCCACGAGCGCGTTCGCAGCCGTCCCGATAAACATAGCTTGTTTTCTTCGTTTCGCGCGCGCGACAG
ACGATATAGGGTTCGCCGAT

Downstream 100 bases:

>100_bases
CGAGGAGTAATCGCAATGAGCACGGTCATCGAAGCACGGCCGCCGGTGCGGGAGGGCGGCGAGATCGAAGCGCAGGTCAA
TTACCTGGCGAAAGGCGTCG

Product: short chain dehydrogenase/reductase family oxidoreductase

Products: NA

Alternate protein names: GLCDH-II [H]

Number of amino acids: Translated: 258; Mature: 257

Protein sequence:

>258_residues
MTIDTVSSRSIPLAWIAGVGASAGLGAALGRRFARGGYAVVLSGRTHERVAAVADEIRAQGGVAHVASGDIASEADVERL
AIEVRTLGALRAAVFNAGNAVRAPTLELSVAQFEHAWRTNVIGGFLFAKAALAQLLDADGGAPGDDTPRSLLFTGATASL
RGRPPFAAFASAKAGLRSLAQTLAREFGPRGVHVAHAVIDGGIDGERLRGAAPERVAQAGADGLLSPDAIADSYWQLHVQ
HRSAWTQELDLRPYNEAF

Sequences:

>Translated_258_residues
MTIDTVSSRSIPLAWIAGVGASAGLGAALGRRFARGGYAVVLSGRTHERVAAVADEIRAQGGVAHVASGDIASEADVERL
AIEVRTLGALRAAVFNAGNAVRAPTLELSVAQFEHAWRTNVIGGFLFAKAALAQLLDADGGAPGDDTPRSLLFTGATASL
RGRPPFAAFASAKAGLRSLAQTLAREFGPRGVHVAHAVIDGGIDGERLRGAAPERVAQAGADGLLSPDAIADSYWQLHVQ
HRSAWTQELDLRPYNEAF
>Mature_257_residues
TIDTVSSRSIPLAWIAGVGASAGLGAALGRRFARGGYAVVLSGRTHERVAAVADEIRAQGGVAHVASGDIASEADVERLA
IEVRTLGALRAAVFNAGNAVRAPTLELSVAQFEHAWRTNVIGGFLFAKAALAQLLDADGGAPGDDTPRSLLFTGATASLR
GRPPFAAFASAKAGLRSLAQTLAREFGPRGVHVAHAVIDGGIDGERLRGAAPERVAQAGADGLLSPDAIADSYWQLHVQH
RSAWTQELDLRPYNEAF

Specific function: Unknown

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

None

Paralogues:

None

Copy number: 1300 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.47 [H]

Molecular weight: Translated: 26819; Mature: 26688

Theoretical pI: Translated: 7.26; Mature: 7.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIDTVSSRSIPLAWIAGVGASAGLGAALGRRFARGGYAVVLSGRTHERVAAVADEIRAQ
CCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHC
GGVAHVASGDIASEADVERLAIEVRTLGALRAAVFNAGNAVRAPTLELSVAQFEHAWRTN
CCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHH
VIGGFLFAKAALAQLLDADGGAPGDDTPRSLLFTGATASLRGRPPFAAFASAKAGLRSLA
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHH
QTLAREFGPRGVHVAHAVIDGGIDGERLRGAAPERVAQAGADGLLSPDAIADSYWQLHVQ
HHHHHHCCCCCEEEEHHHHCCCCCHHHHCCCCHHHHHHCCCCCCCCCHHHHHHHHHEEEH
HRSAWTQELDLRPYNEAF
HHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
TIDTVSSRSIPLAWIAGVGASAGLGAALGRRFARGGYAVVLSGRTHERVAAVADEIRAQ
CCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHC
GGVAHVASGDIASEADVERLAIEVRTLGALRAAVFNAGNAVRAPTLELSVAQFEHAWRTN
CCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHH
VIGGFLFAKAALAQLLDADGGAPGDDTPRSLLFTGATASLRGRPPFAAFASAKAGLRSLA
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHH
QTLAREFGPRGVHVAHAVIDGGIDGERLRGAAPERVAQAGADGLLSPDAIADSYWQLHVQ
HHHHHHCCCCCEEEEHHHHCCCCCHHHHCCCCHHHHHHCCCCCCCCCHHHHHHHHHEEEH
HRSAWTQELDLRPYNEAF
HHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA