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The map label for this gene is betI

Identifier: 126447868

GI number: 126447868

Start: 1387874

End: 1388461

Strand: Direct

Name: betI

Synonym: BMA10247_A1426

Alternate gene names: 126447868

Gene position: 1387874-1388461 (Clockwise)

Preceding gene: 262192891

Following gene: 126447112

Centisome position: 58.99

GC content: 70.24

Gene sequence:

>588_bases
ATGCCCAAACTCGGAATGCGCGAAATCCGCCGCGCCCAATTGATCGACGCGACGCTGCGCTCCATCGACGAGGCAGGCCT
GCCCGGCACGACGCTCGCGTCCGTCGCGCAGCGCGCGAACATCTCGACCGGCATCGTCAGCCACTACTTCGGCGACAAGG
ACGGCCTGCTCGAAGCAACGATGCGCCACGTGCTGCGCGACCTGTGGGCCGCGACGACGCGCCGCCGCGCGGCCGCGTCC
GATGCGCCGCGCGCGCGCCTGCGCGCCGTCGTCGCCGCCAATTTCGACGACACGCAGATCAGCGCGCCCGTGATGAAGAC
GTGGCTCGCGTTCTGGTCGCAGAGCATGCACGAGCCGACGCTAAGACGCCTGCAGCGCGTCAACACGCGGCGGCTCCATT
CGAATCTGTGCGCGGAGTTCGCCAAGACGCTGCCCCGCGCGCGCGCCCGCGAAGCCGCAAGCGGCCTCGCCGCGTTGATC
GACGGCCTGTGGCTGCGCGGCGCGCTGGCGGGCGAACCGCTCGACACGAAGGCGGCCCTGAAGCTCGCCAACGATTACAT
CGACCAGTTGCTCGCGCCGCGCGTGTAA

Upstream 100 bases:

>100_bases
CCCGATGCGATCGCCTCCTACTTTTTATTGATTGAACGATCAATAAAAAACCGCTATCCTTCGGACTTCGCCACCCGCCG
TGCTCAATGAAGGCTCCCCG

Downstream 100 bases:

>100_bases
CGCGCCGCGCGCCCACTCCCTCGCCGACACAAGGAGATCCCCATGTCCGTATACGGTCTGCAGCGCCTTTACATCGCCGG
CGCCCACGCCGACGCCACGA

Product: transcriptional regulator BetI

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MPKLGMREIRRAQLIDATLRSIDEAGLPGTTLASVAQRANISTGIVSHYFGDKDGLLEATMRHVLRDLWAATTRRRAAAS
DAPRARLRAVVAANFDDTQISAPVMKTWLAFWSQSMHEPTLRRLQRVNTRRLHSNLCAEFAKTLPRARAREAASGLAALI
DGLWLRGALAGEPLDTKAALKLANDYIDQLLAPRV

Sequences:

>Translated_195_residues
MPKLGMREIRRAQLIDATLRSIDEAGLPGTTLASVAQRANISTGIVSHYFGDKDGLLEATMRHVLRDLWAATTRRRAAAS
DAPRARLRAVVAANFDDTQISAPVMKTWLAFWSQSMHEPTLRRLQRVNTRRLHSNLCAEFAKTLPRARAREAASGLAALI
DGLWLRGALAGEPLDTKAALKLANDYIDQLLAPRV
>Mature_194_residues
PKLGMREIRRAQLIDATLRSIDEAGLPGTTLASVAQRANISTGIVSHYFGDKDGLLEATMRHVLRDLWAATTRRRAAASD
APRARLRAVVAANFDDTQISAPVMKTWLAFWSQSMHEPTLRRLQRVNTRRLHSNLCAEFAKTLPRARAREAASGLAALID
GLWLRGALAGEPLDTKAALKLANDYIDQLLAPRV

Specific function: Repressor involved in choline regulation of the bet genes

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain

Homologues:

Organism=Escherichia coli, GI1786505, Length=194, Percent_Identity=57.2164948453608, Blast_Score=218, Evalue=2e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): BETI_BURM7 (A3MEC5)

Other databases:

- EMBL:   CP000547
- RefSeq:   YP_001078611.1
- ProteinModelPortal:   A3MEC5
- GeneID:   4890681
- GenomeReviews:   CP000547_GR
- KEGG:   bmn:BMA10247_A1426
- TIGR:   BMA10247_A1426
- HOGENOM:   HBG684746
- OMA:   INHYFGG
- ProtClustDB:   PRK00767
- BioCyc:   BMAL320389:BMA10247_A1426-MONOMER
- HAMAP:   MF_00768
- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR017757
- InterPro:   IPR001647
- Gene3D:   G3DSA:1.10.357.10
- TIGRFAMs:   TIGR03384

Pfam domain/function: PF00440 TetR_N; SSF46689 Homeodomain_like; SSF48498 TetR_like_C

EC number: NA

Molecular weight: Translated: 21490; Mature: 21359

Theoretical pI: Translated: 11.33; Mature: 11.33

Prosite motif: PS01081 HTH_TETR_1; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKLGMREIRRAQLIDATLRSIDEAGLPGTTLASVAQRANISTGIVSHYFGDKDGLLEAT
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHH
MRHVLRDLWAATTRRRAAASDAPRARLRAVVAANFDDTQISAPVMKTWLAFWSQSMHEPT
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHH
LRRLQRVNTRRLHSNLCAEFAKTLPRARAREAASGLAALIDGLWLRGALAGEPLDTKAAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
KLANDYIDQLLAPRV
HHHHHHHHHHHCCCC
>Mature Secondary Structure 
PKLGMREIRRAQLIDATLRSIDEAGLPGTTLASVAQRANISTGIVSHYFGDKDGLLEAT
CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHH
MRHVLRDLWAATTRRRAAASDAPRARLRAVVAANFDDTQISAPVMKTWLAFWSQSMHEPT
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHH
LRRLQRVNTRRLHSNLCAEFAKTLPRARAREAASGLAALIDGLWLRGALAGEPLDTKAAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
KLANDYIDQLLAPRV
HHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA