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The map label for this gene is 126447828

Identifier: 126447828

GI number: 126447828

Start: 1859879

End: 1860856

Strand: Reverse

Name: 126447828

Synonym: BMA10247_A1931

Alternate gene names: NA

Gene position: 1860856-1859879 (Counterclockwise)

Preceding gene: 126446224

Following gene: 126446684

Centisome position: 79.09

GC content: 72.49

Gene sequence:

>978_bases
ATGAATCAACTGATCGACACCCTCGGACGGCGCGCGGTGCTCATCGGCGTCGCGCTCGGCCTGGCCGCCTGCGCGGGCGG
CGGCCCGCCGGGCGAGGCGCCGGCGACGCTGCCGCGCATCGTCGCGCATCGCGGCGGCGCGGCCGATGCGCCGGAGAACA
CACTCGATGCGATCCGGGTGGCGGTCGCGAATCGGGCGGACGCGATTTGGCTGACCGTCCAACTGAGCCGCGACGGCGTG
CCGGTGCTGTATCGGCCCGCCGATCTATCGGCGCTCACGCGCTCGAGCGGCCCGGTCGCCGGCCACACGGCCGCGCAGCT
CGCGCAGATGAACGCCGGCTGGCAATTCCGCGATGCGGGCGGGCGGTATCCGTATCGCGCGCGCCCGGTCGGCATTCCGA
CGTTGCGCGACGCGCTGCGCGCGATTCCGCCCGCGATGCCGATCGTGCTCGACATGAAGGCGGTGCCCGCCGCGCCGCAG
GCGAAGGCCGTCGCGGACGTGCTGACGAGCGAGGCCGCGTGGCCGCGCGTGACGATCTATTCGACCGATGCCGCTTATCA
GACCGCGTTCGCCTCGTATCCGCAGGCACGGCTCTTCGAATCGCGCGATGCGACGCGCGGGCGGCTCGTCGACGTGCTGC
TCGGCGGCGCGTGCGAACGCGCGCCCGAGGCGCCTGCGACGGCGCCCATATGGACCGGCTTCGAAATGCATCGAAACATG
ACGGTGAGCGAGCGCTTGACGCTCGGCGAAGGCGTATCGCCCGTGAAGGCGACGTTGTGGACGCCCGCGACCGTCGCGTG
CTTCAGGCGGCGCGCGGACGTGCGGATTCTCGCGATCGCGGTGAACGACGCCGACGATTACCGCACGGCCGCGTGCCTCG
GGCTCGATGCGGTGCTCGCGGATTCGCCGCGCGAGATGGCGGAAATCCGGTCGGCGCTGCGGGCGCGGCCGTTGCGGTGC
GAGACGGGGGCGCGATAG

Upstream 100 bases:

>100_bases
GCCCGACGGCATCTTAACCGCGGCGAAGCGCTGAAGAAACTCCGTCGCGTATCGTCGACCCAAAGGGAGGGAATGCATTT
TCAACGAAGGAACGAAATCC

Downstream 100 bases:

>100_bases
GCAGGCGACGGGGCGAAACGGGTTGGCCGCCCGGCGATCGCGCGGTTCGTCTTCACGCGGCTCCCCTCACCGGATAGCGG
GCGTGCGCGCGGTTTCATAG

Product: glycerophosphoryl diester phosphodiesterase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MNQLIDTLGRRAVLIGVALGLAACAGGGPPGEAPATLPRIVAHRGGAADAPENTLDAIRVAVANRADAIWLTVQLSRDGV
PVLYRPADLSALTRSSGPVAGHTAAQLAQMNAGWQFRDAGGRYPYRARPVGIPTLRDALRAIPPAMPIVLDMKAVPAAPQ
AKAVADVLTSEAAWPRVTIYSTDAAYQTAFASYPQARLFESRDATRGRLVDVLLGGACERAPEAPATAPIWTGFEMHRNM
TVSERLTLGEGVSPVKATLWTPATVACFRRRADVRILAIAVNDADDYRTAACLGLDAVLADSPREMAEIRSALRARPLRC
ETGAR

Sequences:

>Translated_325_residues
MNQLIDTLGRRAVLIGVALGLAACAGGGPPGEAPATLPRIVAHRGGAADAPENTLDAIRVAVANRADAIWLTVQLSRDGV
PVLYRPADLSALTRSSGPVAGHTAAQLAQMNAGWQFRDAGGRYPYRARPVGIPTLRDALRAIPPAMPIVLDMKAVPAAPQ
AKAVADVLTSEAAWPRVTIYSTDAAYQTAFASYPQARLFESRDATRGRLVDVLLGGACERAPEAPATAPIWTGFEMHRNM
TVSERLTLGEGVSPVKATLWTPATVACFRRRADVRILAIAVNDADDYRTAACLGLDAVLADSPREMAEIRSALRARPLRC
ETGAR
>Mature_325_residues
MNQLIDTLGRRAVLIGVALGLAACAGGGPPGEAPATLPRIVAHRGGAADAPENTLDAIRVAVANRADAIWLTVQLSRDGV
PVLYRPADLSALTRSSGPVAGHTAAQLAQMNAGWQFRDAGGRYPYRARPVGIPTLRDALRAIPPAMPIVLDMKAVPAAPQ
AKAVADVLTSEAAWPRVTIYSTDAAYQTAFASYPQARLFESRDATRGRLVDVLLGGACERAPEAPATAPIWTGFEMHRNM
TVSERLTLGEGVSPVKATLWTPATVACFRRRADVRILAIAVNDADDYRTAACLGLDAVLADSPREMAEIRSALRARPLRC
ETGAR

Specific function: Unknown

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GDPD domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004129
- InterPro:   IPR017946 [H]

Pfam domain/function: PF03009 GDPD [H]

EC number: NA

Molecular weight: Translated: 34431; Mature: 34431

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQLIDTLGRRAVLIGVALGLAACAGGGPPGEAPATLPRIVAHRGGAADAPENTLDAIRV
CCHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHH
AVANRADAIWLTVQLSRDGVPVLYRPADLSALTRSSGPVAGHTAAQLAQMNAGWQFRDAG
HHHCCCCEEEEEEEECCCCCCEEECCCCHHHHHCCCCCCCCHHHHHHHHHCCCEEEECCC
GRYPYRARPVGIPTLRDALRAIPPAMPIVLDMKAVPAAPQAKAVADVLTSEAAWPRVTIY
CCCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCEEEEE
STDAAYQTAFASYPQARLFESRDATRGRLVDVLLGGACERAPEAPATAPIWTGFEMHRNM
ECCHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHCCCHHCCCCCCCCCCEECCHHHHCCC
TVSERLTLGEGVSPVKATLWTPATVACFRRRADVRILAIAVNDADDYRTAACLGLDAVLA
CHHHHHHCCCCCCCHHHHHCCCHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHC
DSPREMAEIRSALRARPLRCETGAR
CCHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MNQLIDTLGRRAVLIGVALGLAACAGGGPPGEAPATLPRIVAHRGGAADAPENTLDAIRV
CCHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHH
AVANRADAIWLTVQLSRDGVPVLYRPADLSALTRSSGPVAGHTAAQLAQMNAGWQFRDAG
HHHCCCCEEEEEEEECCCCCCEEECCCCHHHHHCCCCCCCCHHHHHHHHHCCCEEEECCC
GRYPYRARPVGIPTLRDALRAIPPAMPIVLDMKAVPAAPQAKAVADVLTSEAAWPRVTIY
CCCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCEEEEE
STDAAYQTAFASYPQARLFESRDATRGRLVDVLLGGACERAPEAPATAPIWTGFEMHRNM
ECCHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHCCCHHCCCCCCCCCCEECCHHHHCCC
TVSERLTLGEGVSPVKATLWTPATVACFRRRADVRILAIAVNDADDYRTAACLGLDAVLA
CHHHHHHCCCCCCCHHHHHCCCHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHC
DSPREMAEIRSALRARPLRCETGAR
CCHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]