| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
Click here to switch to the map view.
The map label for this gene is 126447789
Identifier: 126447789
GI number: 126447789
Start: 24872
End: 25723
Strand: Direct
Name: 126447789
Synonym: BMA10247_A0031
Alternate gene names: NA
Gene position: 24872-25723 (Clockwise)
Preceding gene: 126447278
Following gene: 126445725
Centisome position: 1.06
GC content: 64.55
Gene sequence:
>852_bases ATGAAAGCGTTCGATCGCGATGCCGGGGCGCCCCGGATCGGCCTTGCGTACGGGCCCGGCATGGCGGAATTCGCCGCACG GCATGCGCATCTCGTCGATTACATCGAAGTGCCGTTCGAGCTCTTGCGATTCTCGCCGACGATTGCCGAGCTTCAGCAAA CCATTCCGTTCGTTCTGCACTGCGCCAGCTTGTCCGTTGCGGGATTCGTGCCGCCCGACGATTCGACCGTCGACGCAATC GAGCGCACGGCCGTGCGCACCGGCACGCCGTGGATCGGCGAACATCTCGCGTACATCTCGGCCGATCCCATCGGCGAGGC GCTGGGTGGGACCCATGAGCCCACGTCGCTGTCTTACACGCTGTGCCCTCAGTTGAGCGACGAGACGGTGCGGCGCGTCG CCGATAATCTCGCCGTGCTCGCTCCGCGCTTTCCGGTTCCGCTGATCGTGGAAAATTCGCCCCAATACTTTTCGATTCCC GGCAGCACGATGGGCATGACCGACTTCATTCGCGCGATCGCGGACCGGTGCGATGTCGGCTTGCTCCTGGATCTGAGCCA TTTTCTGATCACGGCGTACAACACGGGCGCCGACGTGCACCGGGAATTCGCCCGGCTGCCGCTCGAGCGCGTGGTCGAAG TTCACCTGTCCGGCATGAGCATCCAGTCCGGCGCGGCCTGGGACGATCATTCGCTGCCGGCGTCGCCGATCCTCTTCGAA CTGCTCGAGCGCCTGCTCGCCGTCGCGCGGCCTCGCGCGCTGACCTTCGAATACAACTGGTCGCCATACTTCCCGTTGTC GGTCCTCACGAGCCACATCGAACGCGCGCGCGCGCTGATGGGGCTTGCATGA
Upstream 100 bases:
>100_bases AGCCGCGCCGCCGAACGCGAGGCGTTCGGCGTGCGCTCGCGCAATGGCGGGCGATAAATCTGGACTGCTGCGGTTCGGCG CCTGAAGGCGCGGGAAGCCT
Downstream 100 bases:
>100_bases ACGCAAGGACGATACACGCGCTGATCGCGGCCAGCACCAAGGATCCGCAGCTCATCGAGCGTTGGCGGCGGCATCCGGAC CTGCTGCGCGGCGCGGGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 283; Mature: 283
Protein sequence:
>283_residues MKAFDRDAGAPRIGLAYGPGMAEFAARHAHLVDYIEVPFELLRFSPTIAELQQTIPFVLHCASLSVAGFVPPDDSTVDAI ERTAVRTGTPWIGEHLAYISADPIGEALGGTHEPTSLSYTLCPQLSDETVRRVADNLAVLAPRFPVPLIVENSPQYFSIP GSTMGMTDFIRAIADRCDVGLLLDLSHFLITAYNTGADVHREFARLPLERVVEVHLSGMSIQSGAAWDDHSLPASPILFE LLERLLAVARPRALTFEYNWSPYFPLSVLTSHIERARALMGLA
Sequences:
>Translated_283_residues MKAFDRDAGAPRIGLAYGPGMAEFAARHAHLVDYIEVPFELLRFSPTIAELQQTIPFVLHCASLSVAGFVPPDDSTVDAI ERTAVRTGTPWIGEHLAYISADPIGEALGGTHEPTSLSYTLCPQLSDETVRRVADNLAVLAPRFPVPLIVENSPQYFSIP GSTMGMTDFIRAIADRCDVGLLLDLSHFLITAYNTGADVHREFARLPLERVVEVHLSGMSIQSGAAWDDHSLPASPILFE LLERLLAVARPRALTFEYNWSPYFPLSVLTSHIERARALMGLA >Mature_283_residues MKAFDRDAGAPRIGLAYGPGMAEFAARHAHLVDYIEVPFELLRFSPTIAELQQTIPFVLHCASLSVAGFVPPDDSTVDAI ERTAVRTGTPWIGEHLAYISADPIGEALGGTHEPTSLSYTLCPQLSDETVRRVADNLAVLAPRFPVPLIVENSPQYFSIP GSTMGMTDFIRAIADRCDVGLLLDLSHFLITAYNTGADVHREFARLPLERVVEVHLSGMSIQSGAAWDDHSLPASPILFE LLERLLAVARPRALTFEYNWSPYFPLSVLTSHIERARALMGLA
Specific function: Unknown
COG id: COG3220
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0276 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007801 - InterPro: IPR013022 [H]
Pfam domain/function: PF05114 DUF692 [H]
EC number: NA
Molecular weight: Translated: 30993; Mature: 30993
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAFDRDAGAPRIGLAYGPGMAEFAARHAHLVDYIEVPFELLRFSPTIAELQQTIPFVLH CCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH CASLSVAGFVPPDDSTVDAIERTAVRTGTPWIGEHLAYISADPIGEALGGTHEPTSLSYT HHHHCEEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHCCCCCCCCEEEE LCPQLSDETVRRVADNLAVLAPRFPVPLIVENSPQYFSIPGSTMGMTDFIRAIADRCDVG ECCCCCHHHHHHHHHHHHEECCCCCCCEEECCCCCEEECCCCCCCHHHHHHHHHHHCCCC LLLDLSHFLITAYNTGADVHREFARLPLERVVEVHLSGMSIQSGAAWDDHSLPASPILFE HHHHHHHHHHEEECCCHHHHHHHHHCCHHHHHHHHHCCCEECCCCCCCCCCCCCCHHHHH LLERLLAVARPRALTFEYNWSPYFPLSVLTSHIERARALMGLA HHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKAFDRDAGAPRIGLAYGPGMAEFAARHAHLVDYIEVPFELLRFSPTIAELQQTIPFVLH CCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH CASLSVAGFVPPDDSTVDAIERTAVRTGTPWIGEHLAYISADPIGEALGGTHEPTSLSYT HHHHCEEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHCCCCCCCCEEEE LCPQLSDETVRRVADNLAVLAPRFPVPLIVENSPQYFSIPGSTMGMTDFIRAIADRCDVG ECCCCCHHHHHHHHHHHHEECCCCCCCEEECCCCCEEECCCCCCCHHHHHHHHHHHCCCC LLLDLSHFLITAYNTGADVHREFARLPLERVVEVHLSGMSIQSGAAWDDHSLPASPILFE HHHHHHHHHHEEECCCHHHHHHHHHCCHHHHHHHHHCCCEECCCCCCCCCCCCCCHHHHH LLERLLAVARPRALTFEYNWSPYFPLSVLTSHIERARALMGLA HHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA