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The map label for this gene is kinB [H]

Identifier: 126447783

GI number: 126447783

Start: 602066

End: 603145

Strand: Direct

Name: kinB [H]

Synonym: BMA10247_A0653

Alternate gene names: 126447783

Gene position: 602066-603145 (Clockwise)

Preceding gene: 126445932

Following gene: 126447148

Centisome position: 25.59

GC content: 72.96

Gene sequence:

>1080_bases
GTGCCGCAACGGGCCGATGCCCGAATCTTCGAGGTGATGCAGGCGAGGCAGCCGTGGGGCACGCTCGCGCTCGATCGCGA
CGGCGCGATCGTCGCCGCCACGCGGCGCGCGCACGCGCTGCTCGGCCGCGCGCTGCCGGCCGGGCTGCCGCTCGCCGCCG
TGCTCGGCGAAGCGGTGGGGACGGATTTCGCCGCGCTCGTCGAGGCGCTCGAACCAGGATTCGAATTCGAAACCGACGAC
GCGATCCTGTGGCTCACGCTGCAGCCGGTCGAGCACGATCCGGCGATCGCGGCGACGGTCACGGTGGCCGATGTCACGCC
GCTGCGCCGCGCGCTCGACGAACGCGTCGCGTCGCTGCGCTTTCTTGCGCACGATCTGCGTTCGCCGCAGAATTCGATTC
TCGCGCTGACCCAGTTGCACGACGCCGATCCCGACGCGTTCGCCGCATGCGGCGGGCTCGAACGGATCGCGCAGCTCGCG
CGGCACGCGCTGCTGCTCGGCCAGGACTATCTCGTCGCGTCGGCGGCGGACGATCTGCGGCAGCGCCACTTCGTGCGCTT
CGACCTGCGCAAGATGCTGCGCGAGCTCGTGCCGAAGCTCGAGGTGAGCGCGGTCTATCGCGGCGTCGCGCTGCAACTAT
GGCTCGACGACGCCGCGCCGCTGTGGCTGCGCGGCGCGCGCGTGTTCGTCGCCCGTGCGCTGCAGAATCTGATCGACAAT
GCGGTGCAGGCGTCGCGGCAGGGCGCGCGCGTCGAGATCCGGCTGCACGTGCGCGACGTGCACGCGGAAGTGGCGATCCG
CGATTGGGCGGGCGGCCTGCCGGGCCTCGCGACGGATGCGCGGATGACCGATTTCGCGCCGCTCGCCAAGCGCGGCTCGA
TGGGCTTCGGCCTCGGGCTGCAGCTCGCCGCGCAGGTGGTGGCCGCGCATGCGGGCACGCTGCACGCCGAATCGAATCGC
GGCGTCGGCACGACGTTCGTGATGCGCTTGCCGATGCTCGCGCCGGCGCCGGGCGCCGTGCCGCCGGCCGTGCCGGACGG
CATCGCGCGCTGGCGCGCGAGCGTCGCGCCGGACGGCTGA

Upstream 100 bases:

>100_bases
AAGCGCTTTCGAATCGGGTCACACTGCGCGCTCGCGCCGCCGCGCCGCGGCCTGTCCAATCATTCGCGGATGCCGAGCTC
CGCCGGAGTCGAACTTGAGC

Downstream 100 bases:

>100_bases
GCGCGCGGGTGCGCGTATTTCCTTTTTCGCTTGACGATTCTTTTCTTACGATGTCCGAACCGAACATGCAGCGCACCGTG
CAGCAGCCCAAGCAGATCGT

Product: sensor histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 359; Mature: 358

Protein sequence:

>359_residues
MPQRADARIFEVMQARQPWGTLALDRDGAIVAATRRAHALLGRALPAGLPLAAVLGEAVGTDFAALVEALEPGFEFETDD
AILWLTLQPVEHDPAIAATVTVADVTPLRRALDERVASLRFLAHDLRSPQNSILALTQLHDADPDAFAACGGLERIAQLA
RHALLLGQDYLVASAADDLRQRHFVRFDLRKMLRELVPKLEVSAVYRGVALQLWLDDAAPLWLRGARVFVARALQNLIDN
AVQASRQGARVEIRLHVRDVHAEVAIRDWAGGLPGLATDARMTDFAPLAKRGSMGFGLGLQLAAQVVAAHAGTLHAESNR
GVGTTFVMRLPMLAPAPGAVPPAVPDGIARWRASVAPDG

Sequences:

>Translated_359_residues
MPQRADARIFEVMQARQPWGTLALDRDGAIVAATRRAHALLGRALPAGLPLAAVLGEAVGTDFAALVEALEPGFEFETDD
AILWLTLQPVEHDPAIAATVTVADVTPLRRALDERVASLRFLAHDLRSPQNSILALTQLHDADPDAFAACGGLERIAQLA
RHALLLGQDYLVASAADDLRQRHFVRFDLRKMLRELVPKLEVSAVYRGVALQLWLDDAAPLWLRGARVFVARALQNLIDN
AVQASRQGARVEIRLHVRDVHAEVAIRDWAGGLPGLATDARMTDFAPLAKRGSMGFGLGLQLAAQVVAAHAGTLHAESNR
GVGTTFVMRLPMLAPAPGAVPPAVPDGIARWRASVAPDG
>Mature_358_residues
PQRADARIFEVMQARQPWGTLALDRDGAIVAATRRAHALLGRALPAGLPLAAVLGEAVGTDFAALVEALEPGFEFETDDA
ILWLTLQPVEHDPAIAATVTVADVTPLRRALDERVASLRFLAHDLRSPQNSILALTQLHDADPDAFAACGGLERIAQLAR
HALLLGQDYLVASAADDLRQRHFVRFDLRKMLRELVPKLEVSAVYRGVALQLWLDDAAPLWLRGARVFVARALQNLIDNA
VQASRQGARVEIRLHVRDVHAEVAIRDWAGGLPGLATDARMTDFAPLAKRGSMGFGLGLQLAAQVVAAHAGTLHAESNRG
VGTTFVMRLPMLAPAPGAVPPAVPDGIARWRASVAPDG

Specific function: Member of the two-component regulatory system AlgB/KinB involved in regulation of alginate biosynthesis genes. KinB functions as a membrane-associated protein kinase that phosphorylates AlgB, probably in response to environmental signals [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003660
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR013656
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA; PF08448 PAS_4 [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 38558; Mature: 38427

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQRADARIFEVMQARQPWGTLALDRDGAIVAATRRAHALLGRALPAGLPLAAVLGEAVG
CCCCHHHHHHHHHHHCCCCCCEEECCCCCEEEEHHHHHHHHHHHCCCCCCHHHHHHHHHC
TDFAALVEALEPGFEFETDDAILWLTLQPVEHDPAIAATVTVADVTPLRRALDERVASLR
CCHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHH
FLAHDLRSPQNSILALTQLHDADPDAFAACGGLERIAQLARHALLLGQDYLVASAADDLR
HHHHHHCCCHHHEEEEEHHCCCCCHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH
QRHFVRFDLRKMLRELVPKLEVSAVYRGVALQLWLDDAAPLWLRGARVFVARALQNLIDN
HHHHHHHHHHHHHHHHHCHHHHHHHHHCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH
AVQASRQGARVEIRLHVRDVHAEVAIRDWAGGLPGLATDARMTDFAPLAKRGSMGFGLGL
HHHHHCCCCEEEEEEEEEEHHHHHEEHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHH
QLAAQVVAAHAGTLHAESNRGVGTTFVMRLPMLAPAPGAVPPAVPDGIARWRASVAPDG
HHHHHHHHHHCCCEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCC
>Mature Secondary Structure 
PQRADARIFEVMQARQPWGTLALDRDGAIVAATRRAHALLGRALPAGLPLAAVLGEAVG
CCCHHHHHHHHHHHCCCCCCEEECCCCCEEEEHHHHHHHHHHHCCCCCCHHHHHHHHHC
TDFAALVEALEPGFEFETDDAILWLTLQPVEHDPAIAATVTVADVTPLRRALDERVASLR
CCHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHH
FLAHDLRSPQNSILALTQLHDADPDAFAACGGLERIAQLARHALLLGQDYLVASAADDLR
HHHHHHCCCHHHEEEEEHHCCCCCHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH
QRHFVRFDLRKMLRELVPKLEVSAVYRGVALQLWLDDAAPLWLRGARVFVARALQNLIDN
HHHHHHHHHHHHHHHHHCHHHHHHHHHCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH
AVQASRQGARVEIRLHVRDVHAEVAIRDWAGGLPGLATDARMTDFAPLAKRGSMGFGLGL
HHHHHCCCCEEEEEEEEEEHHHHHEEHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHH
QLAAQVVAAHAGTLHAESNRGVGTTFVMRLPMLAPAPGAVPPAVPDGIARWRASVAPDG
HHHHHHHHHHCCCEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9218420 [H]