Click here to switch to the map view.

The map label for this gene is 126447759

Identifier: 126447759

GI number: 126447759

Start: 1779371

End: 1780468

Strand: Reverse

Name: 126447759

Synonym: BMA10247_A1848

Alternate gene names: NA

Gene position: 1780468-1779371 (Counterclockwise)

Preceding gene: 126445845

Following gene: 126445873

Centisome position: 75.68

GC content: 65.76

Gene sequence:

>1098_bases
ATGAAGCGAAAGAGTCTGGCGATGGCGGTGGCGGGTATCGGGATCGGCGCGGCGGTGCCGCCGGCGCTCGCGCAATCGAG
CGTGACGCTGTACGGCATCGTCGATTCCGGCATCACGTACACGAACAACCAGAAGGGGCATTCTGCCTGGAAGGCGACGA
GCGGCAATGAGCAGGCCGCCCGCTGGGGGCTTGTCGGGCGCGAGGATCTCGGCGGCGGCACGAGCGCGATATTCCGGCTC
GAGAACGGCTTCGACATCGAGAACGGTACGGCGAGCCAGGGCGGTCGGCTGTTCGGACGTCGCACGTACATCGGATTGGC
GAACGATCGCTGGGGCGCGTTCACGATGGGCCGTCAGTACAACGCGGTGCAGGAAACGCTGGCTCCGCTGCATATCGCAA
CCGTACTCGGAAGATACGCACATCATCCGTTTGATGCCGACGACCTGGACAGTACGTTTCGCACGAACAATTCGGTCCAG
TACCAGACGCCCGATTGGGGCGGCGTGCGCGCGATCGCGACGTACGGCTTCTCGAACTCGACGTCGTTCGCGCGGAACCG
CACATGGAGCGTCGGGGCGAGCTATGCGCGCGGCCCGCTGCAACTCGCCGCCGCATACGTGCGCGTCGACTATCCGGCGA
TCGATGCGACCGGCGCGATCGCGTCCGACAATTACTACGGGTTCGTCAAGGGCGTCGCGCGGCAGCAGATCTGGGGCGCG
GGCGGCGCGTACGCGTGGGGCGGCGCGACCTTCGGGCTGTTGTATACGAGCGCGCTGTTCAGTCTGCAGACGGGCGGCGC
CGAGCGCTTCAACAATTTCGAGGGCAGCGTGCGCTACCGCGTGACGCCCGCGGTGCAGGTCGCGCTCGGCGAGACGTACA
CGCAGGTGCTCGCGTCGCACGCGGCCGCGCATGACGCGCACTATCTGCAGACGAGCGCGGGGATCCAGTATTTCCTGTCG
AAGCGCACGGACGTCTATTTGAACGTGTCCTATCAACGGGCATCGTCGAATGCCGTGGCGTGGATCAAGGGGCTTGACGG
GGCATCGAGCACGCGCACGCAGATCGTCGCGGTGACGGGCATCCGGCACAAGTTCTGA

Upstream 100 bases:

>100_bases
GTTTCGAATAATAAATAAGACGGTGTTTTAATTAATAAAACACGTCGCGGGCGGAGCGAATCCGCGTGACCGACAAACGA
AACGACGCAAGAGGTTTGAG

Downstream 100 bases:

>100_bases
CTGACCGGCGGATCGGCGAAATCCCCTCGTTTTGACGATCGAGGTGCTGCTGAGTATTGCCACGGAATGATTTCCGAAGG
CGCCGTCCGCAGCCGATGCA

Product: putative outer membrane porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 365; Mature: 365

Protein sequence:

>365_residues
MKRKSLAMAVAGIGIGAAVPPALAQSSVTLYGIVDSGITYTNNQKGHSAWKATSGNEQAARWGLVGREDLGGGTSAIFRL
ENGFDIENGTASQGGRLFGRRTYIGLANDRWGAFTMGRQYNAVQETLAPLHIATVLGRYAHHPFDADDLDSTFRTNNSVQ
YQTPDWGGVRAIATYGFSNSTSFARNRTWSVGASYARGPLQLAAAYVRVDYPAIDATGAIASDNYYGFVKGVARQQIWGA
GGAYAWGGATFGLLYTSALFSLQTGGAERFNNFEGSVRYRVTPAVQVALGETYTQVLASHAAAHDAHYLQTSAGIQYFLS
KRTDVYLNVSYQRASSNAVAWIKGLDGASSTRTQIVAVTGIRHKF

Sequences:

>Translated_365_residues
MKRKSLAMAVAGIGIGAAVPPALAQSSVTLYGIVDSGITYTNNQKGHSAWKATSGNEQAARWGLVGREDLGGGTSAIFRL
ENGFDIENGTASQGGRLFGRRTYIGLANDRWGAFTMGRQYNAVQETLAPLHIATVLGRYAHHPFDADDLDSTFRTNNSVQ
YQTPDWGGVRAIATYGFSNSTSFARNRTWSVGASYARGPLQLAAAYVRVDYPAIDATGAIASDNYYGFVKGVARQQIWGA
GGAYAWGGATFGLLYTSALFSLQTGGAERFNNFEGSVRYRVTPAVQVALGETYTQVLASHAAAHDAHYLQTSAGIQYFLS
KRTDVYLNVSYQRASSNAVAWIKGLDGASSTRTQIVAVTGIRHKF
>Mature_365_residues
MKRKSLAMAVAGIGIGAAVPPALAQSSVTLYGIVDSGITYTNNQKGHSAWKATSGNEQAARWGLVGREDLGGGTSAIFRL
ENGFDIENGTASQGGRLFGRRTYIGLANDRWGAFTMGRQYNAVQETLAPLHIATVLGRYAHHPFDADDLDSTFRTNNSVQ
YQTPDWGGVRAIATYGFSNSTSFARNRTWSVGASYARGPLQLAAAYVRVDYPAIDATGAIASDNYYGFVKGVARQQIWGA
GGAYAWGGATFGLLYTSALFSLQTGGAERFNNFEGSVRYRVTPAVQVALGETYTQVLASHAAAHDAHYLQTSAGIQYFLS
KRTDVYLNVSYQRASSNAVAWIKGLDGASSTRTQIVAVTGIRHKF

Specific function: Forms anion selective channels [H]

COG id: COG3203

COG function: function code M; Outer membrane protein (porin)

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 39149; Mature: 39149

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRKSLAMAVAGIGIGAAVPPALAQSSVTLYGIVDSGITYTNNQKGHSAWKATSGNEQAA
CCCHHHEEEEECCCCCCCCCHHHHCCCEEEEEEEECCEEECCCCCCCCCCCCCCCCCHHH
RWGLVGREDLGGGTSAIFRLENGFDIENGTASQGGRLFGRRTYIGLANDRWGAFTMGRQY
HCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCEEECCCCH
NAVQETLAPLHIATVLGRYAHHPFDADDLDSTFRTNNSVQYQTPDWGGVRAIATYGFSNS
HHHHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHHCCCEEEEECCCCCCEEEEEEECCCCC
TSFARNRTWSVGASYARGPLQLAAAYVRVDYPAIDATGAIASDNYYGFVKGVARQQIWGA
CCHHHCCCEECCCCCCCCHHHHEEEEEEEECCCCCCCCCEECCCCCHHHHHHHHHHHCCC
GGAYAWGGATFGLLYTSALFSLQTGGAERFNNFEGSVRYRVTPAVQVALGETYTQVLASH
CCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCEEEEEECCEEEEEHHHHHHHHHHHH
AAAHDAHYLQTSAGIQYFLSKRTDVYLNVSYQRASSNAVAWIKGLDGASSTRTQIVAVTG
HHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCEEEEEEECCCCCCCCEEEEEEEC
IRHKF
CCCCC
>Mature Secondary Structure
MKRKSLAMAVAGIGIGAAVPPALAQSSVTLYGIVDSGITYTNNQKGHSAWKATSGNEQAA
CCCHHHEEEEECCCCCCCCCHHHHCCCEEEEEEEECCEEECCCCCCCCCCCCCCCCCHHH
RWGLVGREDLGGGTSAIFRLENGFDIENGTASQGGRLFGRRTYIGLANDRWGAFTMGRQY
HCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCEEECCCCH
NAVQETLAPLHIATVLGRYAHHPFDADDLDSTFRTNNSVQYQTPDWGGVRAIATYGFSNS
HHHHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHHCCCEEEEECCCCCCEEEEEEECCCCC
TSFARNRTWSVGASYARGPLQLAAAYVRVDYPAIDATGAIASDNYYGFVKGVARQQIWGA
CCHHHCCCEECCCCCCCCHHHHEEEEEEEECCCCCCCCCEECCCCCHHHHHHHHHHHCCC
GGAYAWGGATFGLLYTSALFSLQTGGAERFNNFEGSVRYRVTPAVQVALGETYTQVLASH
CCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCEEEEEECCEEEEEHHHHHHHHHHHH
AAAHDAHYLQTSAGIQYFLSKRTDVYLNVSYQRASSNAVAWIKGLDGASSTRTQIVAVTG
HHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCEEEEEEECCCCCCCCEEEEEEEC
IRHKF
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1658537; 12910271 [H]