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The map label for this gene is btr [H]

Identifier: 126447755

GI number: 126447755

Start: 162036

End: 162764

Strand: Reverse

Name: btr [H]

Synonym: BMA10247_A0190

Alternate gene names: 126447755

Gene position: 162764-162036 (Counterclockwise)

Preceding gene: 126445636

Following gene: 126447528

Centisome position: 6.92

GC content: 65.98

Gene sequence:

>729_bases
GTGATCAGGCTGCATCCCGTGACGGCCGACGACGCGCCGAAGCTGCCGGCGACCCGCTGCTCGACCTGCGCGATACGCAA
CGTGTGCATGCCGGCCGGCCTCACGCCGATCGAATTCGCGCGGCTCGACGCGATGGTCTGCACGACGCGCCACGTCAAGC
GCGGCGACGCGCTGTTCCGCACGCACGACACGTTCCAGAGCATCTATGCGGTGCGCACCGGCTCGTTCAAGACGGTCGTC
ATGCACCGCGACGGCCGCGAGCAGGTAACGGGCTTCCAGATCGTCGGCGAGACGCTCGGGCTGGACGGCGTGTGCGGCGG
CCGCCACAACAGCGATGCGATTGCGCTCGAGGACAGCACCGTGTGCATCATCCCGTTCGCGCAGCTCGAGGCGGTGTGCC
GCGAGGTGAAGCCGATGCAGCACCACGTGCATCAGTTGATGAGCGGCGAGATCGTTCGCGAATCGAGCCTGATGATGCTG
CTCGGCACGATGACGGCCGAGCAGCGCGTTGCCGCATTCCTGCTCAATATTTCCGAGCGTTTCCAGAAGCGCGGCTATTC
GGCATCGGAATTCAACCTGCGGATGACGCGCGAGGAAATCGGCTGCTACCTCGGGATGAAGCTCGAGACGGTCAGCCGGA
TGCTGTCGAAGTTCCAGCGCGACCGGTTGATCGCGCCGCGCGGCAAGCAGATCCGCATCACCGATCCGCAGGGGCTCGCG
CGCGTGTGA

Upstream 100 bases:

>100_bases
CACGTCCGCCGTGCCAGTCGGGCGTCGCGCATGAAAGGAGCCGATTATGCTGACCGCCTCTGTCAATGAAGCAGAGCCCT
GCGCCGAGCCGCAGCGGCCG

Downstream 100 bases:

>100_bases
CGCGCCGCTGCGGCGGCGCGTTGCGAAGCGGCCGCGCCGGCGTGTTGAAGTGTGGATGTATCGGTATTTCGATGCGTCGA
CGTTTCAATGCGCGGCCGCG

Product: Crp/FNR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MIRLHPVTADDAPKLPATRCSTCAIRNVCMPAGLTPIEFARLDAMVCTTRHVKRGDALFRTHDTFQSIYAVRTGSFKTVV
MHRDGREQVTGFQIVGETLGLDGVCGGRHNSDAIALEDSTVCIIPFAQLEAVCREVKPMQHHVHQLMSGEIVRESSLMML
LGTMTAEQRVAAFLLNISERFQKRGYSASEFNLRMTREEIGCYLGMKLETVSRMLSKFQRDRLIAPRGKQIRITDPQGLA
RV

Sequences:

>Translated_242_residues
MIRLHPVTADDAPKLPATRCSTCAIRNVCMPAGLTPIEFARLDAMVCTTRHVKRGDALFRTHDTFQSIYAVRTGSFKTVV
MHRDGREQVTGFQIVGETLGLDGVCGGRHNSDAIALEDSTVCIIPFAQLEAVCREVKPMQHHVHQLMSGEIVRESSLMML
LGTMTAEQRVAAFLLNISERFQKRGYSASEFNLRMTREEIGCYLGMKLETVSRMLSKFQRDRLIAPRGKQIRITDPQGLA
RV
>Mature_242_residues
MIRLHPVTADDAPKLPATRCSTCAIRNVCMPAGLTPIEFARLDAMVCTTRHVKRGDALFRTHDTFQSIYAVRTGSFKTVV
MHRDGREQVTGFQIVGETLGLDGVCGGRHNSDAIALEDSTVCIIPFAQLEAVCREVKPMQHHVHQLMSGEIVRESSLMML
LGTMTAEQRVAAFLLNISERFQKRGYSASEFNLRMTREEIGCYLGMKLETVSRMLSKFQRDRLIAPRGKQIRITDPQGLA
RV

Specific function: May regulate gene expression in response to changes in oxygen levels or to changes in the redox potential of the bacterial environment [H]

COG id: COG0664

COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH crp-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787595, Length=226, Percent_Identity=39.3805309734513, Blast_Score=190, Evalue=9e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018490
- InterPro:   IPR000595
- InterPro:   IPR001808
- InterPro:   IPR012318
- InterPro:   IPR014710
- InterPro:   IPR018335
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00027 cNMP_binding; PF00325 Crp [H]

EC number: NA

Molecular weight: Translated: 27081; Mature: 27081

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: PS51063 HTH_CRP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
8.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRLHPVTADDAPKLPATRCSTCAIRNVCMPAGLTPIEFARLDAMVCTTRHVKRGDALFR
CEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHH
THDTFQSIYAVRTGSFKTVVMHRDGREQVTGFQIVGETLGLDGVCGGRHNSDAIALEDST
HHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHEEEHHHCCCCCCCCCCCCCCEEEEECCE
VCIIPFAQLEAVCREVKPMQHHVHQLMSGEIVRESSLMMLLGTMTAEQRVAAFLLNISER
EEEEEHHHHHHHHHHCCHHHHHHHHHHCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
FQKRGYSASEFNLRMTREEIGCYLGMKLETVSRMLSKFQRDRLIAPRGKQIRITDPQGLA
HHHCCCCCCCEEEEEEHHHHCCHHCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCC
RV
CC
>Mature Secondary Structure
MIRLHPVTADDAPKLPATRCSTCAIRNVCMPAGLTPIEFARLDAMVCTTRHVKRGDALFR
CEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHH
THDTFQSIYAVRTGSFKTVVMHRDGREQVTGFQIVGETLGLDGVCGGRHNSDAIALEDST
HHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHEEEHHHCCCCCCCCCCCCCCEEEEECCE
VCIIPFAQLEAVCREVKPMQHHVHQLMSGEIVRESSLMMLLGTMTAEQRVAAFLLNISER
EEEEEHHHHHHHHHHCCHHHHHHHHHHCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
FQKRGYSASEFNLRMTREEIGCYLGMKLETVSRMLSKFQRDRLIAPRGKQIRITDPQGLA
HHHCCCCCCCEEEEEEHHHHCCHHCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCC
RV
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7693656; 12910271 [H]