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The map label for this gene is appY [C]

Identifier: 126447750

GI number: 126447750

Start: 77608

End: 78114

Strand: Direct

Name: appY [C]

Synonym: BMA10247_A0092

Alternate gene names: 126447750

Gene position: 77608-78114 (Clockwise)

Preceding gene: 126447300

Following gene: 126445709

Centisome position: 3.3

GC content: 69.63

Gene sequence:

>507_bases
TTGCCGCGTCAAGCCTTCTCTATCCGCGTCCGCCTTCGCGGCCGGCTGCCGAAGGCGCGCTTTCGCGCGCCCGACAACCG
GCTGCGGCTGCCGACATCGAGCTTGCCGCGCCGGCTCGCGCTCGCGAACAACGAGGCTCATGCGCAGGCACTCGGCCAGC
TCGACCGCGAGATGGCGCGGCTCAATCTCGACGGGTCGGCGCTTGCCGACCGTGTTCGCGCGGAATTGACGTTGACCGAG
AGCGGTTATCCGTCGCTCGCGCGGCTCGCGTCGAAGCTGTTCCTGTCCGAACGCACGCCGAAACGCCGGTTGCAGGCGCA
CGGCACGCCGTATCGGAACATGCTCGAGGCCGCGCGCTATCGCGACGCGTGCCGGTTGCTGACGCGCACCGATCGGTGCG
TCGCCGATGTCTCGACGCGGCTCGGCTATGTGAATCCTTCCGCGTTCACGCGCGCCTTTCGCCGCTGGGCCGGCATCGCG
CCCAGCCGCTATCGCGACGACCGCTGA

Upstream 100 bases:

>100_bases
GCGTCGGCCTTCGGCCGGTTCCGGGAGGCGCGGAGTCGCGCGCCGCGCGGGCTTGCCGCATGCTGGTCGCGGTTGGGCTG
CGCGGCGGGCAGACGGTCGT

Downstream 100 bases:

>100_bases
CGCCTGCCGATCGACGGCGACGGTCGCCGAGGCTCATCGGCGGGCGCTGTCGATGAGCGTTCTATGAGCGCCGCTGCCGC
CAGCGGCTTCGCCAATGGCC

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 167

Protein sequence:

>168_residues
MPRQAFSIRVRLRGRLPKARFRAPDNRLRLPTSSLPRRLALANNEAHAQALGQLDREMARLNLDGSALADRVRAELTLTE
SGYPSLARLASKLFLSERTPKRRLQAHGTPYRNMLEAARYRDACRLLTRTDRCVADVSTRLGYVNPSAFTRAFRRWAGIA
PSRYRDDR

Sequences:

>Translated_168_residues
MPRQAFSIRVRLRGRLPKARFRAPDNRLRLPTSSLPRRLALANNEAHAQALGQLDREMARLNLDGSALADRVRAELTLTE
SGYPSLARLASKLFLSERTPKRRLQAHGTPYRNMLEAARYRDACRLLTRTDRCVADVSTRLGYVNPSAFTRAFRRWAGIA
PSRYRDDR
>Mature_167_residues
PRQAFSIRVRLRGRLPKARFRAPDNRLRLPTSSLPRRLALANNEAHAQALGQLDREMARLNLDGSALADRVRAELTLTES
GYPSLARLASKLFLSERTPKRRLQAHGTPYRNMLEAARYRDACRLLTRTDRCVADVSTRLGYVNPSAFTRAFRRWAGIAP
SRYRDDR

Specific function: Induces The Synthesis Of Acid Phosphatase (Appa) And Several Other Polypeptides (Such As Appbc) During The Deceleration Phase Of Growth. It Also Acts As A Transcriptional Repressor For One Group Of Proteins That Are Synthesized Preferentially In Exponenti

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR020449
- InterPro:   IPR018060 [H]

Pfam domain/function: PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 19218; Mature: 19087

Theoretical pI: Translated: 12.11; Mature: 12.11

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRQAFSIRVRLRGRLPKARFRAPDNRLRLPTSSLPRRLALANNEAHAQALGQLDREMAR
CCCCCEEEEEEECCCCCHHHHCCCCCCEECCHHHHCHHHHHCCCHHHHHHHHHHHHHHHH
LNLDGSALADRVRAELTLTESGYPSLARLASKLFLSERTPKRRLQAHGTPYRNMLEAARY
HCCCHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHH
RDACRLLTRTDRCVADVSTRLGYVNPSAFTRAFRRWAGIAPSRYRDDR
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
PRQAFSIRVRLRGRLPKARFRAPDNRLRLPTSSLPRRLALANNEAHAQALGQLDREMAR
CCCCEEEEEEECCCCCHHHHCCCCCCEECCHHHHCHHHHHCCCHHHHHHHHHHHHHHHH
LNLDGSALADRVRAELTLTESGYPSLARLASKLFLSERTPKRRLQAHGTPYRNMLEAARY
HCCCHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHH
RDACRLLTRTDRCVADVSTRLGYVNPSAFTRAFRRWAGIAPSRYRDDR
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036; 12368430 [H]