| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is 126447726
Identifier: 126447726
GI number: 126447726
Start: 255564
End: 257438
Strand: Reverse
Name: 126447726
Synonym: BMA10247_A0292
Alternate gene names: NA
Gene position: 257438-255564 (Counterclockwise)
Preceding gene: 126445816
Following gene: 126447844
Centisome position: 10.94
GC content: 70.03
Gene sequence:
>1875_bases ATGCGCACTCCGACGCCCCTGTTCGCCGCACTGTCGCTCCTGTCCACCGTCGCCGCCGCGCCCGCGTTCGCGGCCGCCGC ATCGCCCGTCAGCACGAACTGCGGCGGCAGCGCAACGCCGATCGCCGAGATTCAGGGCGCCGGCGCGCCTTCGCCGCTCG CCGGCCAGAACGTATCGATCGAGGCCGTCGTCACGGCCGATTTCGGCGGCGCCGACGGCTTCGGCGGCTTCTTCGTCCAG CAGGCCGATCCGCAGCGCCGCAACCAGCCCGGCGTATCCGAAGGGCTGTTCGTCTACTCGCCGAAAGCCCGCGCGCGCGC GGGCGAGCTCGTGCACGTGACGGGCAAGGTCGAGGAGAAATACGGGCAGACGCAGCTCACGCTGTCGGGCGCCGTCGCGG TCTGCGCGAGCGGCCAGTCGGTCACGCCGGCGACGCTCGCGCTGCCCGTCGACAGCCCGAACGCGTTCGCCGCGTACGAA GGCATGCTCGTGCGCCTGCCGCAAACGCTGACCGTCACCGAGGTCTATGAACTCGGCCGCTACGGCAGCGTGCTGCTCAG CAACGGGCGTCTGCGCACGCCGACGAGCGTCGTGCCGCCCGCGCAGGCGAAGGCGGTGGCCGAGGCGAATGCGCGCAACC GGCTGATCCTCGACGACGGCTCGAACAAGCAGAATCCGGCGACCGTCCCGTATCCGGCGCCGGCGCTCTCCGCCGCGAAC ACGCTGCGCGCGGGCTACACGGCCGCCGATGTCGAGGGCGTGCTCGAGCTGCGCTACGGCGCATGGCGCCTGCAACCGGT GCCGGGCGCGCGTACGCCCACTTTCGGCGCGAGCGCGAACCCGCGCACCGCCGCGCCCGCGCGCGATCCTCGCGCGAACC TGCGGGTCGCTTCGTTCAACGTACTGAACTACTTCAACGGCGACGGCGCGGGCGGCGGCTTCGACGATCCGAGCAACCGG GGCGCGAAGAACTACGAAGAGTTCGTCCGGCAGGACGCGAAGATCGTCAGCGCGCTGAAGGCGCTCGACGCCGACGTGAT CGGCCTGATGGAAATCGAGAACGACGGCTACGGCCCGCTGAGCGCGGTGCGCCAGCTCGCGGCGAAGCTCGGCGAGAACT GGCGGGTGGTGGACCCGGGCAGCGCGCGGCTCGGCGGCGATGCGATCGCGGTCGCGCTGATCTACGACAGCCGCAAAGTG AAGCCGATCGGCAACGCGGCGACGCTCGCGATCGACGACAAGAACCGTCAGCCGCTCGCGCAGACATTCCGGCCGCTCGG CGGCTCGCGTGCGGTGACGGTCGCCGTCAATCATCTGAAATCGAAGAACTGCCCGGATGCGACGGGCGATGACCTCGATC AGGGAGACGGCCAGGGCTGCTGGAATGCGACGCGCTCGCGCGCGGCGGCGAAGATTGCCGATTGGCTCGCGCGCAATCCG ACGGGCGCGCCCAGCGAAGGCGTGCTGCTGATCGGCGACCTCAACAGCTACACGTACGAGGATCCGGTTCGCACGCTCGA ATCGCGCGGCTACGTGAATCTCGTGTCGAGCAAGGTCGGCTCCGGCGCATACAGCTACGTCTACAACGGCGAGGCGGGCT ACCTCGACCACGCGCTCGCGACGAACGCGCTCGCCTGGCGCGTGAAGGCGGTGCACGACTGGCACATCAACGCGGACGAG CCGATCGCCCTGCAATACACGCTCGCATACAAGAGCGCCGAACAGCAGCGCACGTATTACGCGCCCGACGCGTATCGCTC GTCCGATCACGATCCGGTACTGATCGACATCGCGCTCGCCGACGAATATGCGGCCGCGGCGTCGCGCCGAGGCGCGGAGA TGGCGGCCGCGCACAGCCGTCGCCCGTGGCATTGA
Upstream 100 bases:
>100_bases CCAAAACCTGGCCAGATTACATATTCACATCCATTCTTTACGCAAAACTGTCAACATGCGCCACTAAGCTTTCAGGATTC CCACACAACGGACCGTTCCC
Downstream 100 bases:
>100_bases CGCGTCCGGCGGGACGTCGCGCGCCGATGTGTCGCGTGAGCGCGGGCTCGAGCGCGACGCGCGCCGCATGACAGGCGGCA GGCGGCGCGCAAGGCATGAC
Product: endonuclease/exonuclease/phosphatase family protein
Products: NA
Alternate protein names: Extracellular Nuclease; Nuclease; 5-Nucleotidase Domain Protein; Endonuclease/Exonuclease/Phosphatase Family Protein; 5-Nucleotidase Domain-Containing Protein; Endonuclease/Exonuclease/Phosphatase Family; Extracellular Ribonuclease/Nuclease Fusion Protein; Extracellular Nuclease-Like Protein; 5-Nucleotidase; PKD Domain-Containing Protein; Exported Nuclease; Outer Membrane Adhesin Like Proteiin; LPXTG-Motif Cell Wall Anchor Domain Protein; DNA Nuclease; Calcineurin-Like Phosphoesterase; Endonuclease I; Extracellular Nuclease-Like; Glutamate-Cysteine Ligase/Putative Amino Acid Ligase; Extracellular Nuclease/Phosphatase; 5-Nucleotidase Family Protein
Number of amino acids: Translated: 624; Mature: 624
Protein sequence:
>624_residues MRTPTPLFAALSLLSTVAAAPAFAAAASPVSTNCGGSATPIAEIQGAGAPSPLAGQNVSIEAVVTADFGGADGFGGFFVQ QADPQRRNQPGVSEGLFVYSPKARARAGELVHVTGKVEEKYGQTQLTLSGAVAVCASGQSVTPATLALPVDSPNAFAAYE GMLVRLPQTLTVTEVYELGRYGSVLLSNGRLRTPTSVVPPAQAKAVAEANARNRLILDDGSNKQNPATVPYPAPALSAAN TLRAGYTAADVEGVLELRYGAWRLQPVPGARTPTFGASANPRTAAPARDPRANLRVASFNVLNYFNGDGAGGGFDDPSNR GAKNYEEFVRQDAKIVSALKALDADVIGLMEIENDGYGPLSAVRQLAAKLGENWRVVDPGSARLGGDAIAVALIYDSRKV KPIGNAATLAIDDKNRQPLAQTFRPLGGSRAVTVAVNHLKSKNCPDATGDDLDQGDGQGCWNATRSRAAAKIADWLARNP TGAPSEGVLLIGDLNSYTYEDPVRTLESRGYVNLVSSKVGSGAYSYVYNGEAGYLDHALATNALAWRVKAVHDWHINADE PIALQYTLAYKSAEQQRTYYAPDAYRSSDHDPVLIDIALADEYAAAASRRGAEMAAAHSRRPWH
Sequences:
>Translated_624_residues MRTPTPLFAALSLLSTVAAAPAFAAAASPVSTNCGGSATPIAEIQGAGAPSPLAGQNVSIEAVVTADFGGADGFGGFFVQ QADPQRRNQPGVSEGLFVYSPKARARAGELVHVTGKVEEKYGQTQLTLSGAVAVCASGQSVTPATLALPVDSPNAFAAYE GMLVRLPQTLTVTEVYELGRYGSVLLSNGRLRTPTSVVPPAQAKAVAEANARNRLILDDGSNKQNPATVPYPAPALSAAN TLRAGYTAADVEGVLELRYGAWRLQPVPGARTPTFGASANPRTAAPARDPRANLRVASFNVLNYFNGDGAGGGFDDPSNR GAKNYEEFVRQDAKIVSALKALDADVIGLMEIENDGYGPLSAVRQLAAKLGENWRVVDPGSARLGGDAIAVALIYDSRKV KPIGNAATLAIDDKNRQPLAQTFRPLGGSRAVTVAVNHLKSKNCPDATGDDLDQGDGQGCWNATRSRAAAKIADWLARNP TGAPSEGVLLIGDLNSYTYEDPVRTLESRGYVNLVSSKVGSGAYSYVYNGEAGYLDHALATNALAWRVKAVHDWHINADE PIALQYTLAYKSAEQQRTYYAPDAYRSSDHDPVLIDIALADEYAAAASRRGAEMAAAHSRRPWH >Mature_624_residues MRTPTPLFAALSLLSTVAAAPAFAAAASPVSTNCGGSATPIAEIQGAGAPSPLAGQNVSIEAVVTADFGGADGFGGFFVQ QADPQRRNQPGVSEGLFVYSPKARARAGELVHVTGKVEEKYGQTQLTLSGAVAVCASGQSVTPATLALPVDSPNAFAAYE GMLVRLPQTLTVTEVYELGRYGSVLLSNGRLRTPTSVVPPAQAKAVAEANARNRLILDDGSNKQNPATVPYPAPALSAAN TLRAGYTAADVEGVLELRYGAWRLQPVPGARTPTFGASANPRTAAPARDPRANLRVASFNVLNYFNGDGAGGGFDDPSNR GAKNYEEFVRQDAKIVSALKALDADVIGLMEIENDGYGPLSAVRQLAAKLGENWRVVDPGSARLGGDAIAVALIYDSRKV KPIGNAATLAIDDKNRQPLAQTFRPLGGSRAVTVAVNHLKSKNCPDATGDDLDQGDGQGCWNATRSRAAAKIADWLARNP TGAPSEGVLLIGDLNSYTYEDPVRTLESRGYVNLVSSKVGSGAYSYVYNGEAGYLDHALATNALAWRVKAVHDWHINADE PIALQYTLAYKSAEQQRTYYAPDAYRSSDHDPVLIDIALADEYAAAASRRGAEMAAAHSRRPWH
Specific function: Unknown
COG id: COG2374
COG function: function code R; Predicted extracellular nuclease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65661; Mature: 65661
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTPTPLFAALSLLSTVAAAPAFAAAASPVSTNCGGSATPIAEIQGAGAPSPLAGQNVSI CCCCCHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCEEE EAVVTADFGGADGFGGFFVQQADPQRRNQPGVSEGLFVYSPKARARAGELVHVTGKVEEK EEEEEECCCCCCCCCCEEEECCCCHHCCCCCCCCCEEEECCCHHCCCCCEEEEECCHHHH YGQTQLTLSGAVAVCASGQSVTPATLALPVDSPNAFAAYEGMLVRLPQTLTVTEVYELGR CCCEEEEECCEEEEEECCCCCCCEEEEEECCCCCCHHHHCCEEEECCCEEEHHHHHHCCC YGSVLLSNGRLRTPTSVVPPAQAKAVAEANARNRLILDDGSNKQNPATVPYPAPALSAAN CCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHH TLRAGYTAADVEGVLELRYGAWRLQPVPGARTPTFGASANPRTAAPARDPRANLRVASFN HHHCCCCHHHHHHHHEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEE VLNYFNGDGAGGGFDDPSNRGAKNYEEFVRQDAKIVSALKALDADVIGLMEIENDGYGPL EEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHH SAVRQLAAKLGENWRVVDPGSARLGGDAIAVALIYDSRKVKPIGNAATLAIDDKNRQPLA HHHHHHHHHHCCCCEEECCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEEECCCCCCHH QTFRPLGGSRAVTVAVNHLKSKNCPDATGDDLDQGDGQGCWNATRSRAAAKIADWLARNP HHHCCCCCCCEEEEEEEHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC TGAPSEGVLLIGDLNSYTYEDPVRTLESRGYVNLVSSKVGSGAYSYVYNGEAGYLDHALA CCCCCCCEEEEECCCCCCCHHHHHHHHCCCCEEEEHHHCCCCEEEEEECCCCCCHHHHHH TNALAWRVKAVHDWHINADEPIALQYTLAYKSAEQQRTYYAPDAYRSSDHDPVLIDIALA HCCCEEEEEEEEEEECCCCCCEEEEEEEEECCHHHCCEEECCCCCCCCCCCCEEEEEEEC DEYAAAASRRGAEMAAAHSRRPWH CHHHHHHHHCCHHHHHHCCCCCCC >Mature Secondary Structure MRTPTPLFAALSLLSTVAAAPAFAAAASPVSTNCGGSATPIAEIQGAGAPSPLAGQNVSI CCCCCHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCEEE EAVVTADFGGADGFGGFFVQQADPQRRNQPGVSEGLFVYSPKARARAGELVHVTGKVEEK EEEEEECCCCCCCCCCEEEECCCCHHCCCCCCCCCEEEECCCHHCCCCCEEEEECCHHHH YGQTQLTLSGAVAVCASGQSVTPATLALPVDSPNAFAAYEGMLVRLPQTLTVTEVYELGR CCCEEEEECCEEEEEECCCCCCCEEEEEECCCCCCHHHHCCEEEECCCEEEHHHHHHCCC YGSVLLSNGRLRTPTSVVPPAQAKAVAEANARNRLILDDGSNKQNPATVPYPAPALSAAN CCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHH TLRAGYTAADVEGVLELRYGAWRLQPVPGARTPTFGASANPRTAAPARDPRANLRVASFN HHHCCCCHHHHHHHHEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEE VLNYFNGDGAGGGFDDPSNRGAKNYEEFVRQDAKIVSALKALDADVIGLMEIENDGYGPL EEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHH SAVRQLAAKLGENWRVVDPGSARLGGDAIAVALIYDSRKVKPIGNAATLAIDDKNRQPLA HHHHHHHHHHCCCCEEECCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEEECCCCCCHH QTFRPLGGSRAVTVAVNHLKSKNCPDATGDDLDQGDGQGCWNATRSRAAAKIADWLARNP HHHCCCCCCCEEEEEEEHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC TGAPSEGVLLIGDLNSYTYEDPVRTLESRGYVNLVSSKVGSGAYSYVYNGEAGYLDHALA CCCCCCCEEEEECCCCCCCHHHHHHHHCCCCEEEEHHHCCCCEEEEEECCCCCCHHHHHH TNALAWRVKAVHDWHINADEPIALQYTLAYKSAEQQRTYYAPDAYRSSDHDPVLIDIALA HCCCEEEEEEEEEEECCCCCCEEEEEEEEECCHHHCCEEECCCCCCCCCCCCEEEEEEEC DEYAAAASRRGAEMAAAHSRRPWH CHHHHHHHHCCHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA