Click here to switch to the map view.

The map label for this gene is yceJ [C]

Identifier: 126447707

GI number: 126447707

Start: 1368451

End: 1368984

Strand: Direct

Name: yceJ [C]

Synonym: BMA10247_A1406

Alternate gene names: 126447707

Gene position: 1368451-1368984 (Clockwise)

Preceding gene: 126447076

Following gene: 262192851

Centisome position: 58.17

GC content: 68.73

Gene sequence:

>534_bases
ATGACACCTTCCACCCGCACCCCGGATCGCTACGATCTGCTCAGCCGCATTCTCCACTGGAGCGTCGCCGCGCTCGTGCT
TGCGCAGTTCGCGCTCGGCTGGACGATGCCGGACGTCCACGGCACGGCGCCGCCCGTCGGCCTCGTCGCGTGGCACGTCG
CGCTCGGTACCGCGTTGATCGTCGTCATCGCGGCGCGCCTGCTGTGGCCGATCGTGCGGCGCAGCCCGCCCGCGCATCAG
CAAGGCGCCCTGTTGTCGTTCGCGGCGAGTGCGACTCACAAGCTGCTGTACGTCGCGCTGATCGCCGTGCCGCTGCTTGG
CTGGCTGAACGCGAACGGCCGCACCTGGCAGTTGAAGCTCGCGGGCGCCATCCCGCTGCCGACGATCGCCGCCCCTCATT
CGCTCGGCGCGGCCATCGGCGAATGGCACAGCTTGTCGGCGACGCTTTTCATCGTGCTGATCGGCATGCACGCGCTCGCG
GCGCTCGTTCATCGCTTCGTGATGAAGGACGGCGCGTTCGAGCGCATGATCTGA

Upstream 100 bases:

>100_bases
CCATAAGAATCGCCCGCGATAATCGAGCGAGCCCGGCAACGCACGACACGTCGGCCGGCCGCTCCCTACGAACGGCTTAC
CCCACGGGACGATTCGCGCA

Downstream 100 bases:

>100_bases
ACGAAACGCGCGTCGCGCCGATCGAACGTCGGCGCGGCGCCTGCGCAACGGCCACGCGGAGTGATGTCGTGGCGGCGAGA
ATCGGCTGGTTGCAGGGCCA

Product: cytochrome b561 family protein

Products: NA

Alternate protein names: Cytochrome; Cytochrome B/B6 Domain; Nickel-Dependent Hydrogenase B-Type Cytochrome Subunit; Ycei Family Protein

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MTPSTRTPDRYDLLSRILHWSVAALVLAQFALGWTMPDVHGTAPPVGLVAWHVALGTALIVVIAARLLWPIVRRSPPAHQ
QGALLSFAASATHKLLYVALIAVPLLGWLNANGRTWQLKLAGAIPLPTIAAPHSLGAAIGEWHSLSATLFIVLIGMHALA
ALVHRFVMKDGAFERMI

Sequences:

>Translated_177_residues
MTPSTRTPDRYDLLSRILHWSVAALVLAQFALGWTMPDVHGTAPPVGLVAWHVALGTALIVVIAARLLWPIVRRSPPAHQ
QGALLSFAASATHKLLYVALIAVPLLGWLNANGRTWQLKLAGAIPLPTIAAPHSLGAAIGEWHSLSATLFIVLIGMHALA
ALVHRFVMKDGAFERMI
>Mature_176_residues
TPSTRTPDRYDLLSRILHWSVAALVLAQFALGWTMPDVHGTAPPVGLVAWHVALGTALIVVIAARLLWPIVRRSPPAHQQ
GALLSFAASATHKLLYVALIAVPLLGWLNANGRTWQLKLAGAIPLPTIAAPHSLGAAIGEWHSLSATLFIVLIGMHALAA
LVHRFVMKDGAFERMI

Specific function: Unknown

COG id: COG3038

COG function: function code C; Cytochrome B561

Gene ontology:

Cell location: Integral membrane protein (Potential) [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787296, Length=181, Percent_Identity=29.8342541436464, Blast_Score=64, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19031; Mature: 18900

Theoretical pI: Translated: 11.41; Mature: 11.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPSTRTPDRYDLLSRILHWSVAALVLAQFALGWTMPDVHGTAPPVGLVAWHVALGTALI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH
VVIAARLLWPIVRRSPPAHQQGALLSFAASATHKLLYVALIAVPLLGWLNANGRTWQLKL
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE
AGAIPLPTIAAPHSLGAAIGEWHSLSATLFIVLIGMHALAALVHRFVMKDGAFERMI
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCC
>Mature Secondary Structure 
TPSTRTPDRYDLLSRILHWSVAALVLAQFALGWTMPDVHGTAPPVGLVAWHVALGTALI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH
VVIAARLLWPIVRRSPPAHQQGALLSFAASATHKLLYVALIAVPLLGWLNANGRTWQLKL
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE
AGAIPLPTIAAPHSLGAAIGEWHSLSATLFIVLIGMHALAALVHRFVMKDGAFERMI
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA