Definition Burkholderia mallei NCTC 10247 chromosome II, complete genome.
Accession NC_009079
Length 2,352,693

Click here to switch to the map view.

The map label for this gene is 126447699

Identifier: 126447699

GI number: 126447699

Start: 51942

End: 53198

Strand: Reverse

Name: 126447699

Synonym: BMA10247_A0064

Alternate gene names: NA

Gene position: 53198-51942 (Counterclockwise)

Preceding gene: 126447187

Following gene: 126447180

Centisome position: 2.26

GC content: 70.33

Gene sequence:

>1257_bases
ATGCACGCCTCTAGCGGCCGTTTCTCCGCCTCGCTCGCGGGCCGGATACCGCCCGCGGGAGCCGACAAGACTGCAGCGCT
CGTCCTGGCGAGCCGCGGCATGCGCGGCTTCTGCGACGGGTTCATTGCCGTGCTGCTGCCAGCGTATCTGCTCGCGCTCG
GGTTTTCACAGCTGGACGTCGGACTGGTCAGTACCGTGACGTTGCTGGGTTCCGCACTCGCGACGATTGCCGTCGGCATG
CTGGCCGGCCGCGTCGCACACCGGCGGATGCTGATGCTCGCCGCGACACTGATGGCCGCCACGGGCATCGGCTTCGCGAG
TCTGTCCACGCTGTGGGCGCTCATCGCCGTCGCGTTCGTCGGCACGCTCAATCCAAGCGCCGGTGACGTCAGCCTGTTTC
TGCCGCTCGAGCAGTCGCGCCTTGCCGAGGCCGCCGCGGGCGATGCCCGCACCGCGCTCTTTGCGCGATACAGCCTGATC
GGCGCGCTATCAGCGGCAGCCGGCTCGCTGGCGGCAGGTCTGCCACTCTGGCTCGCCGCGCACACCAGCATCCCGCTGCC
CGGCGCGATGCGCGGCATGTTCGTCGTCTATGCCGGCGCCGGCGTTGCCGTCTGGCTGCTCTATCGACATTTGCCGCTCC
CCGAAGCCCACGCGCCCGCCGCGCCGCCGCCGCTCGGCCCCTCCCGGCGCATCGTCACCCGGCTCGCGATGCTGTTCAGC
GTCGACGCGTTCGCAGGGGGCCTCGTCGTCAATTCACTGCTGTCGCTGTGGCTGATGCAGCGCTTCGGGCTCTCGGTCGC
CGCTGCCGGCCGGTTCTTCTTCTGCGCGGGCTTGCTCTCGGCGGGTTCCCAGCTCGCGGCCACGCCGCTGTCACGCAGGA
TCGGCCTGCTGAACACAATGGTGTTCACGCATATCCCGTCAAGCGTCTGCCTGATCGGCGCTGCCTTCGCGCCCTCGCTG
CCGTTGACGTTGGCGCTGTTGCTGTTGCGAAGCGCGCTTTCGCAAATGGACGTGCCGACGCGCACCGCCTTCGTCATGGC
GGTCGTGACGCCGGCGGAGCGCCCGGCCGCCGCCGGCTTGACGTCCGTCCCGCGCAGCCTCGCGGCGGCGATCGCGCCGG
CTCTGGCGGGCGGCCTGCTCGGGCTCGGCTGGCTTGGCGCGCCGTTGGTGGCATGCGGCGCGCTGAAAATCGGGTACGAC
CTCACGCTGCTGGCGTCTTTTCGACACGTCGAACCGGATGGCGGGCCCGGCCGGTAA

Upstream 100 bases:

>100_bases
GCGATTTCCGTGGGCTTATCCGGCAATTTCCGGGACGACCTCGAGCAGTTGAGGCACGGCATGGTGATGTATGACGCGCT
CTACGCGTGGTGCCGGCGCG

Downstream 100 bases:

>100_bases
ACGGCAATCGCGATCGAGCGGCAACGGTGCAAAAAGGCGAGGAACCCTGCAACACCCACCGCCAAACCATTCGCCCACCG
CCCTATCCCGTACCGGCAAC

Product: major facilitator transporter

Products: NA

Alternate protein names: Facilitator Superfamily Protein; Transporter Protein; Transporter Facilitator Family; Multidrug Efflux Permease; ABC Transporter Permease Protein; Sugar Transporter Related Protein; Transport Transmembrane Protein

Number of amino acids: Translated: 418; Mature: 418

Protein sequence:

>418_residues
MHASSGRFSASLAGRIPPAGADKTAALVLASRGMRGFCDGFIAVLLPAYLLALGFSQLDVGLVSTVTLLGSALATIAVGM
LAGRVAHRRMLMLAATLMAATGIGFASLSTLWALIAVAFVGTLNPSAGDVSLFLPLEQSRLAEAAAGDARTALFARYSLI
GALSAAAGSLAAGLPLWLAAHTSIPLPGAMRGMFVVYAGAGVAVWLLYRHLPLPEAHAPAAPPPLGPSRRIVTRLAMLFS
VDAFAGGLVVNSLLSLWLMQRFGLSVAAAGRFFFCAGLLSAGSQLAATPLSRRIGLLNTMVFTHIPSSVCLIGAAFAPSL
PLTLALLLLRSALSQMDVPTRTAFVMAVVTPAERPAAAGLTSVPRSLAAAIAPALAGGLLGLGWLGAPLVACGALKIGYD
LTLLASFRHVEPDGGPGR

Sequences:

>Translated_418_residues
MHASSGRFSASLAGRIPPAGADKTAALVLASRGMRGFCDGFIAVLLPAYLLALGFSQLDVGLVSTVTLLGSALATIAVGM
LAGRVAHRRMLMLAATLMAATGIGFASLSTLWALIAVAFVGTLNPSAGDVSLFLPLEQSRLAEAAAGDARTALFARYSLI
GALSAAAGSLAAGLPLWLAAHTSIPLPGAMRGMFVVYAGAGVAVWLLYRHLPLPEAHAPAAPPPLGPSRRIVTRLAMLFS
VDAFAGGLVVNSLLSLWLMQRFGLSVAAAGRFFFCAGLLSAGSQLAATPLSRRIGLLNTMVFTHIPSSVCLIGAAFAPSL
PLTLALLLLRSALSQMDVPTRTAFVMAVVTPAERPAAAGLTSVPRSLAAAIAPALAGGLLGLGWLGAPLVACGALKIGYD
LTLLASFRHVEPDGGPGR
>Mature_418_residues
MHASSGRFSASLAGRIPPAGADKTAALVLASRGMRGFCDGFIAVLLPAYLLALGFSQLDVGLVSTVTLLGSALATIAVGM
LAGRVAHRRMLMLAATLMAATGIGFASLSTLWALIAVAFVGTLNPSAGDVSLFLPLEQSRLAEAAAGDARTALFARYSLI
GALSAAAGSLAAGLPLWLAAHTSIPLPGAMRGMFVVYAGAGVAVWLLYRHLPLPEAHAPAAPPPLGPSRRIVTRLAMLFS
VDAFAGGLVVNSLLSLWLMQRFGLSVAAAGRFFFCAGLLSAGSQLAATPLSRRIGLLNTMVFTHIPSSVCLIGAAFAPSL
PLTLALLLLRSALSQMDVPTRTAFVMAVVTPAERPAAAGLTSVPRSLAAAIAPALAGGLLGLGWLGAPLVACGALKIGYD
LTLLASFRHVEPDGGPGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6322584, Length=427, Percent_Identity=22.7166276346604, Blast_Score=107, Evalue=4e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42559; Mature: 42559

Theoretical pI: Translated: 11.36; Mature: 11.36

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHASSGRFSASLAGRIPPAGADKTAALVLASRGMRGFCDGFIAVLLPAYLLALGFSQLDV
CCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
GLVSTVTLLGSALATIAVGMLAGRVAHRRMLMLAATLMAATGIGFASLSTLWALIAVAFV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
GTLNPSAGDVSLFLPLEQSRLAEAAAGDARTALFARYSLIGALSAAAGSLAAGLPLWLAA
HCCCCCCCCEEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
HTSIPLPGAMRGMFVVYAGAGVAVWLLYRHLPLPEAHAPAAPPPLGPSRRIVTRLAMLFS
CCCCCCCHHHHCEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
VDAFAGGLVVNSLLSLWLMQRFGLSVAAAGRFFFCAGLLSAGSQLAATPLSRRIGLLNTM
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHCHHHHHHHHHHHH
VFTHIPSSVCLIGAAFAPSLPLTLALLLLRSALSQMDVPTRTAFVMAVVTPAERPAAAGL
HHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHEEEEEECCCCCCHHCCH
TSVPRSLAAAIAPALAGGLLGLGWLGAPLVACGALKIGYDLTLLASFRHVEPDGGPGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MHASSGRFSASLAGRIPPAGADKTAALVLASRGMRGFCDGFIAVLLPAYLLALGFSQLDV
CCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
GLVSTVTLLGSALATIAVGMLAGRVAHRRMLMLAATLMAATGIGFASLSTLWALIAVAFV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
GTLNPSAGDVSLFLPLEQSRLAEAAAGDARTALFARYSLIGALSAAAGSLAAGLPLWLAA
HCCCCCCCCEEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
HTSIPLPGAMRGMFVVYAGAGVAVWLLYRHLPLPEAHAPAAPPPLGPSRRIVTRLAMLFS
CCCCCCCHHHHCEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
VDAFAGGLVVNSLLSLWLMQRFGLSVAAAGRFFFCAGLLSAGSQLAATPLSRRIGLLNTM
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHCHHHHHHHHHHHH
VFTHIPSSVCLIGAAFAPSLPLTLALLLLRSALSQMDVPTRTAFVMAVVTPAERPAAAGL
HHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHEEEEEECCCCCCHHCCH
TSVPRSLAAAIAPALAGGLLGLGWLGAPLVACGALKIGYDLTLLASFRHVEPDGGPGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA