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The map label for this gene is bkdR [H]

Identifier: 126447660

GI number: 126447660

Start: 462930

End: 463457

Strand: Direct

Name: bkdR [H]

Synonym: BMA10247_A0513

Alternate gene names: 126447660

Gene position: 462930-463457 (Clockwise)

Preceding gene: 126446281

Following gene: 126447015

Centisome position: 19.68

GC content: 66.86

Gene sequence:

>528_bases
ATGAGCGCACCTTCCCGCCGGCTGGACCGGATCGACATCGGCATCCTCAACCAACTGCAGCAGAACGCGCGGATCACGAA
CGCCGAGCTCGCGCGCGCGGTGAACCTGTCGCCGACGCCGTGCTTCAACCGCGTGCGCGCGCTCGAGAAGCTCGGCCTCA
TCAAGCAGCAGGTGACGCTGCTCGATCCGCAGCCGCTCGGGCTGCGCATCAACGTGTTCATTCAGGTGAGCCTCGAGAAG
CAGGCCGAGGACGCGCTGCGCCGCTTCGAGGAGGCGATCGACAAGCGTCCCGAGGTGATGGAGTGCTATCTGATGTCGGG
CGACGCCGATTACCTGCTGCGCGTCGTCGTGCCGAGCATGAAGAGCCTCGAGCGCTTCATCCTCGATCAGCTGACGACGA
TTCCGGGCGTGTCGAACATCCGGTCGAGCTTCGCGTTGAAGCAGGTCCGCTACCGGACCGCGCTGCCGCTGCCGGCGGAC
GGGCTCACGCTCGCCGACGCCGACGACGCGCCGCAGGAGTGGGTGTGA

Upstream 100 bases:

>100_bases
ATCCATCGAGCCGCAGAATGTGCATCTCTTTTGGTTGGAATTTTGGTTTCGGGTAACGTATAAATTCCTGAAAAATCGTC
ATTTTCGGAATGTTTGCACT

Downstream 100 bases:

>100_bases
GCGAAGCGTTCGCGGCCCGGTCGCGCCGCGCGATGCGCGCACACTGTCCGCCGCGTTGCGACCTCATGCCGCACGGCCGG
GCGCCGCTGCGATGCGGGAT

Product: bkd operon transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 174

Protein sequence:

>175_residues
MSAPSRRLDRIDIGILNQLQQNARITNAELARAVNLSPTPCFNRVRALEKLGLIKQQVTLLDPQPLGLRINVFIQVSLEK
QAEDALRRFEEAIDKRPEVMECYLMSGDADYLLRVVVPSMKSLERFILDQLTTIPGVSNIRSSFALKQVRYRTALPLPAD
GLTLADADDAPQEWV

Sequences:

>Translated_175_residues
MSAPSRRLDRIDIGILNQLQQNARITNAELARAVNLSPTPCFNRVRALEKLGLIKQQVTLLDPQPLGLRINVFIQVSLEK
QAEDALRRFEEAIDKRPEVMECYLMSGDADYLLRVVVPSMKSLERFILDQLTTIPGVSNIRSSFALKQVRYRTALPLPAD
GLTLADADDAPQEWV
>Mature_174_residues
SAPSRRLDRIDIGILNQLQQNARITNAELARAVNLSPTPCFNRVRALEKLGLIKQQVTLLDPQPLGLRINVFIQVSLEKQ
AEDALRRFEEAIDKRPEVMECYLMSGDADYLLRVVVPSMKSLERFILDQLTTIPGVSNIRSSFALKQVRYRTALPLPADG
LTLADADDAPQEWV

Specific function: Positive regulator of the bkd operon for branched-chain keto acid dehydrogenase complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787116, Length=147, Percent_Identity=42.1768707482993, Blast_Score=134, Evalue=4e-33,
Organism=Escherichia coli, GI87081742, Length=150, Percent_Identity=38, Blast_Score=124, Evalue=5e-30,
Organism=Escherichia coli, GI1790182, Length=152, Percent_Identity=30.2631578947368, Blast_Score=66, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 19699; Mature: 19568

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: PS00519 HTH_ASNC_1 ; PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAPSRRLDRIDIGILNQLQQNARITNAELARAVNLSPTPCFNRVRALEKLGLIKQQVTL
CCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
LDPQPLGLRINVFIQVSLEKQAEDALRRFEEAIDKRPEVMECYLMSGDADYLLRVVVPSM
CCCCCCCEEEEEEEEEEEHHHHHHHHHHHHHHHHCCCCCEEHEEECCCHHHHHHHHHHHH
KSLERFILDQLTTIPGVSNIRSSFALKQVRYRTALPLPADGLTLADADDAPQEWV
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCC
>Mature Secondary Structure 
SAPSRRLDRIDIGILNQLQQNARITNAELARAVNLSPTPCFNRVRALEKLGLIKQQVTL
CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
LDPQPLGLRINVFIQVSLEKQAEDALRRFEEAIDKRPEVMECYLMSGDADYLLRVVVPSM
CCCCCCCEEEEEEEEEEEHHHHHHHHHHHHHHHHCCCCCEEHEEECCCHHHHHHHHHHHH
KSLERFILDQLTTIPGVSNIRSSFALKQVRYRTALPLPADGLTLADADDAPQEWV
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8320210 [H]