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The map label for this gene is 126447627

Identifier: 126447627

GI number: 126447627

Start: 1886911

End: 1888062

Strand: Reverse

Name: 126447627

Synonym: BMA10247_A1963

Alternate gene names: NA

Gene position: 1888062-1886911 (Counterclockwise)

Preceding gene: 126447752

Following gene: 126447779

Centisome position: 80.25

GC content: 63.02

Gene sequence:

>1152_bases
GTGCCGACAATGAAGAAATCGAATGTTGCCGTGATGGGCGCGCTTGCGCTCGCCATCGGAATCGCGCCGGGCGCAAGCCG
CGCGCAGAGCAGCGTCACGCTTTACGGGATTCTCGATGCCGGTATCACGTACGTCAGCAATACCGGCGGTTCGCACGTCT
TCAAGTTCGACGACGGCGTGTCGTACGGCAACCGGATCGGCTTCAAGGGCACCGAGGATCTCGGCGGGGGCCTGAAGGCG
GTCTTCGTGCTCGAGAGCGGCTTTCGCCTGGGCAACGGCCAGCTCGGTTTCGGCGGCGCGCAGTTCGGCCGCCAGGCTTA
CGTCGGATTGCAGAACAACTGGGGGACGCTGTCGTTCGGCAATCAGCTCGACATGACCGAGGAGATGGTCTATCTGAACA
ACATCTCCGCATGGGCGAGCGGCTATGCGATCCACCAGGGCGACTTCGACCGCTTCAACGGCGATCGCCTGCCGAACTCG
GTGAAGTTCCTGTCGAACGACTTCAGCGGCTTGAAGTTCGGTGCGATGTATTCGTTCGGCAACGTCGCGGGCGACTTCCA
CCGCAACAGCGCGTGGAGCGCGGGCGCGAACTACACGCACGGCGATCTGTCGGTGGGCGCGGCCTATACGCACCTGAACA
ATCCGTCCGGCATCTATGCGTTCGATCCGTACGCGATGATCGGCACGCGGACCTTCCTCGGCCAGCCGACGGTCAGCGTC
GATCCGGCGACGGGCAAGGTCACCGATCTGTTCGCGAATACGCCGATGAACGTCGACAGCCAGGGCACCTTCGGCGTCGG
CGCGAGCTACACGATCGACAAGCTGACGCTGTCGGGCAATTTCACGTACTCGACGATCAAGGGCTTCGGCAACACGTCGC
ACATGCAGGTCTACGAAGGCGGCGGGCTGTATCAGTTCACGCCGGCGCTGAGCTTCGTCGCGGGCTACCAGCACACGCGC
TTCGAAGGCCATCACTGGAATCAGGGGTCGGCGGGCGTTCACTACCTGCTGTCGAAGCGCACGGACGTCTATCTTTCCGG
CGACTACCTGCGTGCGTCGAACGGCGTCGACGCGGTGATCGGCTACAGCTTCACGCCGTCCACCACGCAAACGCAGGCGG
ACATTCGCATCGGGATGCGCCATTCGTTCTGA

Upstream 100 bases:

>100_bases
ATGCGCAACGGTCGTCGGAGTGGTGCGTCGTTTCAGCAATAGTCGCGGATTCGCGTGCGTAACGCGGGAATCTACTTTCT
TATCGAATGAGCAGGGTGGG

Downstream 100 bases:

>100_bases
TCGGCGGGCGATGCGTTGCGGCTCGGGAGCGGTGCGCGCCGCTCCCGGTGCCGTTTACCGCTTCGCGGACGCGCTCAGCC
CGCCGCCCAGCTCCGCCGCG

Product: putative outer membrane porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 382

Protein sequence:

>383_residues
MPTMKKSNVAVMGALALAIGIAPGASRAQSSVTLYGILDAGITYVSNTGGSHVFKFDDGVSYGNRIGFKGTEDLGGGLKA
VFVLESGFRLGNGQLGFGGAQFGRQAYVGLQNNWGTLSFGNQLDMTEEMVYLNNISAWASGYAIHQGDFDRFNGDRLPNS
VKFLSNDFSGLKFGAMYSFGNVAGDFHRNSAWSAGANYTHGDLSVGAAYTHLNNPSGIYAFDPYAMIGTRTFLGQPTVSV
DPATGKVTDLFANTPMNVDSQGTFGVGASYTIDKLTLSGNFTYSTIKGFGNTSHMQVYEGGGLYQFTPALSFVAGYQHTR
FEGHHWNQGSAGVHYLLSKRTDVYLSGDYLRASNGVDAVIGYSFTPSTTQTQADIRIGMRHSF

Sequences:

>Translated_383_residues
MPTMKKSNVAVMGALALAIGIAPGASRAQSSVTLYGILDAGITYVSNTGGSHVFKFDDGVSYGNRIGFKGTEDLGGGLKA
VFVLESGFRLGNGQLGFGGAQFGRQAYVGLQNNWGTLSFGNQLDMTEEMVYLNNISAWASGYAIHQGDFDRFNGDRLPNS
VKFLSNDFSGLKFGAMYSFGNVAGDFHRNSAWSAGANYTHGDLSVGAAYTHLNNPSGIYAFDPYAMIGTRTFLGQPTVSV
DPATGKVTDLFANTPMNVDSQGTFGVGASYTIDKLTLSGNFTYSTIKGFGNTSHMQVYEGGGLYQFTPALSFVAGYQHTR
FEGHHWNQGSAGVHYLLSKRTDVYLSGDYLRASNGVDAVIGYSFTPSTTQTQADIRIGMRHSF
>Mature_382_residues
PTMKKSNVAVMGALALAIGIAPGASRAQSSVTLYGILDAGITYVSNTGGSHVFKFDDGVSYGNRIGFKGTEDLGGGLKAV
FVLESGFRLGNGQLGFGGAQFGRQAYVGLQNNWGTLSFGNQLDMTEEMVYLNNISAWASGYAIHQGDFDRFNGDRLPNSV
KFLSNDFSGLKFGAMYSFGNVAGDFHRNSAWSAGANYTHGDLSVGAAYTHLNNPSGIYAFDPYAMIGTRTFLGQPTVSVD
PATGKVTDLFANTPMNVDSQGTFGVGASYTIDKLTLSGNFTYSTIKGFGNTSHMQVYEGGGLYQFTPALSFVAGYQHTRF
EGHHWNQGSAGVHYLLSKRTDVYLSGDYLRASNGVDAVIGYSFTPSTTQTQADIRIGMRHSF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 40957; Mature: 40826

Theoretical pI: Translated: 7.14; Mature: 7.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTMKKSNVAVMGALALAIGIAPGASRAQSSVTLYGILDAGITYVSNTGGSHVFKFDDGV
CCCCCCCCCHHHEEEEHHHCCCCCCCCCCCCEEEEEEECCCEEEEECCCCCEEEEECCCC
SYGNRIGFKGTEDLGGGLKAVFVLESGFRLGNGQLGFGGAQFGRQAYVGLQNNWGTLSFG
CCCCEECCCCCCCCCCCEEEEEEEECCCEECCCEECCCHHHCCCEEEEEECCCCCEEEEC
NQLDMTEEMVYLNNISAWASGYAIHQGDFDRFNGDRLPNSVKFLSNDFSGLKFGAMYSFG
CCCCCCHHEEEEECCCHHHCCEEEECCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEECCC
NVAGDFHRNSAWSAGANYTHGDLSVGAAYTHLNNPSGIYAFDPYAMIGTRTFLGQPTVSV
CCCCCCCCCCCCCCCCCCCCCCEEECEEEEECCCCCCEEEECCEEEEECEEECCCCCEEE
DPATGKVTDLFANTPMNVDSQGTFGVGASYTIDKLTLSGNFTYSTIKGFGNTSHMQVYEG
CCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEEEECCCCCCEEEEEEC
GGLYQFTPALSFVAGYQHTRFEGHHWNQGSAGVHYLLSKRTDVYLSGDYLRASNGVDAVI
CCEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEECCEEEECCCCCEEE
GYSFTPSTTQTQADIRIGMRHSF
EEEECCCCCCEEEEEEEEEECCC
>Mature Secondary Structure 
PTMKKSNVAVMGALALAIGIAPGASRAQSSVTLYGILDAGITYVSNTGGSHVFKFDDGV
CCCCCCCCHHHEEEEHHHCCCCCCCCCCCCEEEEEEECCCEEEEECCCCCEEEEECCCC
SYGNRIGFKGTEDLGGGLKAVFVLESGFRLGNGQLGFGGAQFGRQAYVGLQNNWGTLSFG
CCCCEECCCCCCCCCCCEEEEEEEECCCEECCCEECCCHHHCCCEEEEEECCCCCEEEEC
NQLDMTEEMVYLNNISAWASGYAIHQGDFDRFNGDRLPNSVKFLSNDFSGLKFGAMYSFG
CCCCCCHHEEEEECCCHHHCCEEEECCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEECCC
NVAGDFHRNSAWSAGANYTHGDLSVGAAYTHLNNPSGIYAFDPYAMIGTRTFLGQPTVSV
CCCCCCCCCCCCCCCCCCCCCCEEECEEEEECCCCCCEEEECCEEEEECEEECCCCCEEE
DPATGKVTDLFANTPMNVDSQGTFGVGASYTIDKLTLSGNFTYSTIKGFGNTSHMQVYEG
CCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEEEECCCCCCEEEEEEC
GGLYQFTPALSFVAGYQHTRFEGHHWNQGSAGVHYLLSKRTDVYLSGDYLRASNGVDAVI
CCEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEECCEEEECCCCCEEE
GYSFTPSTTQTQADIRIGMRHSF
EEEECCCCCCEEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1658537; 12910271 [H]