| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is 126447611
Identifier: 126447611
GI number: 126447611
Start: 1593043
End: 1594059
Strand: Reverse
Name: 126447611
Synonym: BMA10247_A1654
Alternate gene names: NA
Gene position: 1594059-1593043 (Counterclockwise)
Preceding gene: 126445758
Following gene: 126447865
Centisome position: 67.75
GC content: 73.35
Gene sequence:
>1017_bases ATGCCTACTACCGTATCCGCACCGGAAACGCTGTCCGAAACGCGCACGCAGACCCGCGAGCTGTTGCTGCAGACTGCGCT GTCGATGCTCGAACAAGGCTGGTTTCCATCGATCACCGAGCTCGCGAACGCATCCGGCGTGTCGCGCGCCACCGCTTACC GCTACTTCCCGTCGCAGGCGGCGCTCGTGAGCACCGTCGTCGACGAGAGCCTCGGGCCGGTGCTGCAATGGCAGCCGACG TCGACGTCGGTCGAGGCGCGCGTGAACGAGCTGCTCGACTTCGCGTATCCGCGCATGGAGCAGCACGAGGGCGCGTTGCG CGCCGCGCTGCAGGTGGCGCTGCATCAGTGGGCGAACGAGCGTGCGCGGCGCGCGCAGGACGAGCCGAAGTACCGGCGCG GCAACCGCCGGCGGCTGCTCACGCTCGCCGTCGAGCCGATGGTGCGGGCGGGCGTCGATCCGGCGGTGGCCGAGCGGCTC GCGCAGGCACTGTCGTTGCTCTACGGCACCGAGGCGATGGTCGTGCTGAAGGATATCTGGGGGCTCGACTTCCGGCAGTT CATGAACGTCATCAAGTGGATGAGCTCGGCGCTCGTGCGGGCGACGCTCGCGCAAGCGAGCGGGGCGGCGGGCGCGGGCG GCGGCGCAGAGGCGGGGGCGGGCGGCGCTGGCGTGGCTGAAGGTGTGGCTCAAGGCGCGGCTCAAGGCACGGCTGAAGGC ACGGCGGCGGCTGGGGGCGGCGCGGCGCGCGAGCAAGTCGCGCGCGATGCCGGCGCGGCGCAACACGCTTCGCCGGACGG CGACCCCGCCGCCGCGGGCCGCGCCGCCGCCTCGGACAGCCCCGCGGCCGGGCACGGCGACGCGCCAGCCGCGGGTGCTG CGGATGCCGCGGATCCGGCCGGCGACGCAGCCGGCGAGCGCCCCGAGGATCGCGCGTCCGCTTCGCCCACGTCTTCCATC ACTTCGTCCACTCCGTCCGCTTCGCCCGCCTCGGGCGACGACGGGCGCGATGCCTGA
Upstream 100 bases:
>100_bases CGCCAATCGTTCGTTTGTCGCACGATGTACCGCGATTCGATTCCACGGTAACTTTAACACAGATGAGACGGCCGTCTCAG CGGTCGTCCTCACAGGACAC
Downstream 100 bases:
>100_bases ATAGCCGCCTCGGTGCAGCGCCCGCCCGTCGCGGATAAGGCCGGCGGGGCGCACCGCGCATCGCCGCGCGATGCGCGGCC GCGCCGCGCGCGTCCGGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family; TetR Family Regulatory Protein; Transcriptional Regulator; TetR-Family Transcriptional Regulator; Tetr-Family Regulatory Protein; Transcriptional Regulator TetR-Family
Number of amino acids: Translated: 338; Mature: 337
Protein sequence:
>338_residues MPTTVSAPETLSETRTQTRELLLQTALSMLEQGWFPSITELANASGVSRATAYRYFPSQAALVSTVVDESLGPVLQWQPT STSVEARVNELLDFAYPRMEQHEGALRAALQVALHQWANERARRAQDEPKYRRGNRRRLLTLAVEPMVRAGVDPAVAERL AQALSLLYGTEAMVVLKDIWGLDFRQFMNVIKWMSSALVRATLAQASGAAGAGGGAEAGAGGAGVAEGVAQGAAQGTAEG TAAAGGGAAREQVARDAGAAQHASPDGDPAAAGRAAASDSPAAGHGDAPAAGAADAADPAGDAAGERPEDRASASPTSSI TSSTPSASPASGDDGRDA
Sequences:
>Translated_338_residues MPTTVSAPETLSETRTQTRELLLQTALSMLEQGWFPSITELANASGVSRATAYRYFPSQAALVSTVVDESLGPVLQWQPT STSVEARVNELLDFAYPRMEQHEGALRAALQVALHQWANERARRAQDEPKYRRGNRRRLLTLAVEPMVRAGVDPAVAERL AQALSLLYGTEAMVVLKDIWGLDFRQFMNVIKWMSSALVRATLAQASGAAGAGGGAEAGAGGAGVAEGVAQGAAQGTAEG TAAAGGGAAREQVARDAGAAQHASPDGDPAAAGRAAASDSPAAGHGDAPAAGAADAADPAGDAAGERPEDRASASPTSSI TSSTPSASPASGDDGRDA >Mature_337_residues PTTVSAPETLSETRTQTRELLLQTALSMLEQGWFPSITELANASGVSRATAYRYFPSQAALVSTVVDESLGPVLQWQPTS TSVEARVNELLDFAYPRMEQHEGALRAALQVALHQWANERARRAQDEPKYRRGNRRRLLTLAVEPMVRAGVDPAVAERLA QALSLLYGTEAMVVLKDIWGLDFRQFMNVIKWMSSALVRATLAQASGAAGAGGGAEAGAGGAGVAEGVAQGAAQGTAEGT AAAGGGAAREQVARDAGAAQHASPDGDPAAAGRAAASDSPAAGHGDAPAAGAADAADPAGDAAGERPEDRASASPTSSIT SSTPSASPASGDDGRDA
Specific function: Unknown
COG id: COG1309
COG function: function code K; Transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34513; Mature: 34382
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTTVSAPETLSETRTQTRELLLQTALSMLEQGWFPSITELANASGVSRATAYRYFPSQA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHHCCCHH ALVSTVVDESLGPVLQWQPTSTSVEARVNELLDFAYPRMEQHEGALRAALQVALHQWANE HHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RARRAQDEPKYRRGNRRRLLTLAVEPMVRAGVDPAVAERLAQALSLLYGTEAMVVLKDIW HHHHCCCCHHHHCCCCCEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHH GLDFRQFMNVIKWMSSALVRATLAQASGAAGAGGGAEAGAGGAGVAEGVAQGAAQGTAEG CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC TAAAGGGAAREQVARDAGAAQHASPDGDPAAAGRAAASDSPAAGHGDAPAAGAADAADPA CCCCCCHHHHHHHHHHHCCHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GDAAGERPEDRASASPTSSITSSTPSASPASGDDGRDA CCCCCCCCCHHCCCCCCHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure PTTVSAPETLSETRTQTRELLLQTALSMLEQGWFPSITELANASGVSRATAYRYFPSQA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHHCCCHH ALVSTVVDESLGPVLQWQPTSTSVEARVNELLDFAYPRMEQHEGALRAALQVALHQWANE HHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RARRAQDEPKYRRGNRRRLLTLAVEPMVRAGVDPAVAERLAQALSLLYGTEAMVVLKDIW HHHHCCCCHHHHCCCCCEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHH GLDFRQFMNVIKWMSSALVRATLAQASGAAGAGGGAEAGAGGAGVAEGVAQGAAQGTAEG CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC TAAAGGGAAREQVARDAGAAQHASPDGDPAAAGRAAASDSPAAGHGDAPAAGAADAADPA CCCCCCHHHHHHHHHHHCCHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GDAAGERPEDRASASPTSSITSSTPSASPASGDDGRDA CCCCCCCCCHHCCCCCCHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA