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The map label for this gene is dedA [H]

Identifier: 126447475

GI number: 126447475

Start: 348014

End: 349006

Strand: Reverse

Name: dedA [H]

Synonym: BMA10247_A0392

Alternate gene names: 126447475

Gene position: 349006-348014 (Counterclockwise)

Preceding gene: 126447620

Following gene: 126446855

Centisome position: 14.83

GC content: 70.59

Gene sequence:

>993_bases
ATGCTTCATGATCTCGTCGCCCGCTTCGGGCCGCTCATCGTGTTCGTCAACGTGCTCGCCGCCGCGATCGGACTGCCGGT
GCCGGCCATGCCGACGCTCGTCCTGTTCGGCGCGATGGCGACACTGCATCCGGACGCGCTCGGCGCGCAGCTCGCGCCGG
TGCTCGCGCTCGCGGTGCTCGCGGCGCTGATCGGCGATACCGTGTGGTACGTCGCCGGCCGGCATTTCGGCGGCCGCGCG
CTGAAAACCTTATGCAAGCTTTCGCTGTCGCGCGACAGCTGCGTGAAGAAGACCGAGCGCTTCTTCGGCCGCTGGGGCGT
GCGCGTGCTCGCGGTCGCGCGCTTCATTCCGGGGCTGTCGCTGATCTCGGTGCCGATGGCGGGCGCGCTCGGCACGCGCT
ACCGGGTCTTCGTCGGCTACGATGGGCTCGGCGCGCTGCTGTGGGCGGGCTGCGGCGTGGCGATCGGCTTCGCGTTCGCG
AAACAGATCGACTGGCTGTTCGCCGGCGCGAACCAGCTCGGCCGCGCGGTGCTCGTCGTGATCGTCGCGCTGCTCGCGGT
CTATACGGCCGTGCGCTGGATGCGCCGGCGCGCGCTGATCCGCCAGCTCGCGAACGCGCGCATCGACGTCGACGAACTCG
AGCGGCTGCTGCGAGCCGAGCCCGCGCCCGTCGTTTTCGATGCGCGCTCGCCCGAACATCGCAAGCTCGATCCGTACGCG
ATCCCCGGCGCGCAATTCGCCGACGAGCGCGATTTGCGCGACATCGTCGCGCACTATCCGGCGACGCAGAAATTCGTGAT
CTATTGCTCGTGCCCGAACGAGGTGTCGGCTGCGCTGATGGCGCAGCGCCTCAAGCAGGCGGGGTTCGCCGACGCGCTCG
CGCTGCGCGGCGGGCTCGACGCCTGGCGCGACACGGGCCGGCAATTGATCGAACTCGCCCCGCAGCCGCCGAGCGAAGCG
CCCGTGCTCGCGGCCGCGCCGAAGACCGCCTGA

Upstream 100 bases:

>100_bases
TCGCTCGCGGCATGACCTCCTTGCCGAAAATAGCCGATAATCGGCGCATCCACGCGCTCCATGCCGCGCGCGCTTCGCGG
CAATCGTCCAACGTTTCGTC

Downstream 100 bases:

>100_bases
TTCGGGCGATTCATGCGGTTCGCGCCATTCGCGCGAGCGAGGCCGCGCGAGCGAGACGGCCGGTCCGCCTGATTCGATCG
ACTCCGGCCCAATCGACCTG

Product: dedA family protein

Products: NA

Alternate protein names: Protein DSG-1 [H]

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MLHDLVARFGPLIVFVNVLAAAIGLPVPAMPTLVLFGAMATLHPDALGAQLAPVLALAVLAALIGDTVWYVAGRHFGGRA
LKTLCKLSLSRDSCVKKTERFFGRWGVRVLAVARFIPGLSLISVPMAGALGTRYRVFVGYDGLGALLWAGCGVAIGFAFA
KQIDWLFAGANQLGRAVLVVIVALLAVYTAVRWMRRRALIRQLANARIDVDELERLLRAEPAPVVFDARSPEHRKLDPYA
IPGAQFADERDLRDIVAHYPATQKFVIYCSCPNEVSAALMAQRLKQAGFADALALRGGLDAWRDTGRQLIELAPQPPSEA
PVLAAAPKTA

Sequences:

>Translated_330_residues
MLHDLVARFGPLIVFVNVLAAAIGLPVPAMPTLVLFGAMATLHPDALGAQLAPVLALAVLAALIGDTVWYVAGRHFGGRA
LKTLCKLSLSRDSCVKKTERFFGRWGVRVLAVARFIPGLSLISVPMAGALGTRYRVFVGYDGLGALLWAGCGVAIGFAFA
KQIDWLFAGANQLGRAVLVVIVALLAVYTAVRWMRRRALIRQLANARIDVDELERLLRAEPAPVVFDARSPEHRKLDPYA
IPGAQFADERDLRDIVAHYPATQKFVIYCSCPNEVSAALMAQRLKQAGFADALALRGGLDAWRDTGRQLIELAPQPPSEA
PVLAAAPKTA
>Mature_330_residues
MLHDLVARFGPLIVFVNVLAAAIGLPVPAMPTLVLFGAMATLHPDALGAQLAPVLALAVLAALIGDTVWYVAGRHFGGRA
LKTLCKLSLSRDSCVKKTERFFGRWGVRVLAVARFIPGLSLISVPMAGALGTRYRVFVGYDGLGALLWAGCGVAIGFAFA
KQIDWLFAGANQLGRAVLVVIVALLAVYTAVRWMRRRALIRQLANARIDVDELERLLRAEPAPVVFDARSPEHRKLDPYA
IPGAQFADERDLRDIVAHYPATQKFVIYCSCPNEVSAALMAQRLKQAGFADALALRGGLDAWRDTGRQLIELAPQPPSEA
PVLAAAPKTA

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1788656, Length=166, Percent_Identity=31.9277108433735, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 35536; Mature: 35536

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHDLVARFGPLIVFVNVLAAAIGLPVPAMPTLVLFGAMATLHPDALGAQLAPVLALAVL
CHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
AALIGDTVWYVAGRHFGGRALKTLCKLSLSRDSCVKKTERFFGRWGVRVLAVARFIPGLS
HHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
LISVPMAGALGTRYRVFVGYDGLGALLWAGCGVAIGFAFAKQIDWLFAGANQLGRAVLVV
HHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
IVALLAVYTAVRWMRRRALIRQLANARIDVDELERLLRAEPAPVVFDARSPEHRKLDPYA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEECCCCCCCCCCCCC
IPGAQFADERDLRDIVAHYPATQKFVIYCSCPNEVSAALMAQRLKQAGFADALALRGGLD
CCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHCCHH
AWRDTGRQLIELAPQPPSEAPVLAAAPKTA
HHHHHHHHHHHCCCCCCCCCCEECCCCCCC
>Mature Secondary Structure
MLHDLVARFGPLIVFVNVLAAAIGLPVPAMPTLVLFGAMATLHPDALGAQLAPVLALAVL
CHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
AALIGDTVWYVAGRHFGGRALKTLCKLSLSRDSCVKKTERFFGRWGVRVLAVARFIPGLS
HHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
LISVPMAGALGTRYRVFVGYDGLGALLWAGCGVAIGFAFAKQIDWLFAGANQLGRAVLVV
HHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
IVALLAVYTAVRWMRRRALIRQLANARIDVDELERLLRAEPAPVVFDARSPEHRKLDPYA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEECCCCCCCCCCCCC
IPGAQFADERDLRDIVAHYPATQKFVIYCSCPNEVSAALMAQRLKQAGFADALALRGGLD
CCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHCCHH
AWRDTGRQLIELAPQPPSEAPVLAAAPKTA
HHHHHHHHHHHCCCCCCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]