| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is 126447448
Identifier: 126447448
GI number: 126447448
Start: 1705645
End: 1706082
Strand: Reverse
Name: 126447448
Synonym: BMA10247_A1770
Alternate gene names: NA
Gene position: 1706082-1705645 (Counterclockwise)
Preceding gene: 126445992
Following gene: 126445864
Centisome position: 72.52
GC content: 64.16
Gene sequence:
>438_bases ATGAGTCAGGTTCTCGAGATGTTCAACGCGGCCGGGTCCGCGCAATTCAGCAAGATGGTCTGCCAGATGGCGCCTTACTT CGGCACGATCGAGCCGGAGGTCGTCGGGCTGCGGCCGGGCCGGGCCGAGGCGAAGGTCGGTTTTCGGCGCGACATCACCA ATCACATCGGCACGATCCACGCGATCGCGCTGTGCAACGCGGCCGAACTCGTCGCGGGGCTGATGACGCAGGTGTCGATT CCGGACGGCATGCGCTGGATTCCGAGCGGCATGACGGTCGAATACCTGGCGAAGGCGAAGACCGACGTGACCGCGGTAGC CGACGGCTCGGCCGTCGACTGGCAAAGCGAAGGCGACAAGATCGTGCCGGTCGAGATTACCGATTCGGAAGGCCAGACCG TGTTCACCGCGCGGATCACGATGAACCTCAAGGCCTGA
Upstream 100 bases:
>100_bases GAAAACAAGGACGCGCAATGGTACCTTGACGCGCGCCGAGAAAACAGAATAATCTTCTGCAACAGAACATTGTTCTGTTT CAATCGAATCAGGAGACGAT
Downstream 100 bases:
>100_bases GCGCAGGCGCGGCGGGCCCGCCGCTGCCGCCGCCGGCGCACCGGCGCCGCAGCCTGCGAACGAACCGGCGCACGCGGCGC GCTGCAACGAATTTTGAACG
Product: hypothetical protein
Products: NA
Alternate protein names: Thioesterase; Phenylacetic Acid Degradation-Like Protein; Thioesterase Superfamily Protein
Number of amino acids: Translated: 145; Mature: 144
Protein sequence:
>145_residues MSQVLEMFNAAGSAQFSKMVCQMAPYFGTIEPEVVGLRPGRAEAKVGFRRDITNHIGTIHAIALCNAAELVAGLMTQVSI PDGMRWIPSGMTVEYLAKAKTDVTAVADGSAVDWQSEGDKIVPVEITDSEGQTVFTARITMNLKA
Sequences:
>Translated_145_residues MSQVLEMFNAAGSAQFSKMVCQMAPYFGTIEPEVVGLRPGRAEAKVGFRRDITNHIGTIHAIALCNAAELVAGLMTQVSI PDGMRWIPSGMTVEYLAKAKTDVTAVADGSAVDWQSEGDKIVPVEITDSEGQTVFTARITMNLKA >Mature_144_residues SQVLEMFNAAGSAQFSKMVCQMAPYFGTIEPEVVGLRPGRAEAKVGFRRDITNHIGTIHAIALCNAAELVAGLMTQVSIP DGMRWIPSGMTVEYLAKAKTDVTAVADGSAVDWQSEGDKIVPVEITDSEGQTVFTARITMNLKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15549; Mature: 15418
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQVLEMFNAAGSAQFSKMVCQMAPYFGTIEPEVVGLRPGRAEAKVGFRRDITNHIGTIH CHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHH AIALCNAAELVAGLMTQVSIPDGMRWIPSGMTVEYLAKAKTDVTAVADGSAVDWQSEGDK HHHHHCHHHHHHHHHHHCCCCCCCEECCCCCCHHHHHHCCCCEEEEECCCEECCCCCCCE IVPVEITDSEGQTVFTARITMNLKA EEEEEEECCCCCEEEEEEEEEEECC >Mature Secondary Structure SQVLEMFNAAGSAQFSKMVCQMAPYFGTIEPEVVGLRPGRAEAKVGFRRDITNHIGTIH HHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHH AIALCNAAELVAGLMTQVSIPDGMRWIPSGMTVEYLAKAKTDVTAVADGSAVDWQSEGDK HHHHHCHHHHHHHHHHHCCCCCCCEECCCCCCHHHHHHCCCCEEEEECCCEECCCCCCCE IVPVEITDSEGQTVFTARITMNLKA EEEEEEECCCCCEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA