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The map label for this gene is ycaQ [H]

Identifier: 126447395

GI number: 126447395

Start: 1494541

End: 1495770

Strand: Direct

Name: ycaQ [H]

Synonym: BMA10247_A1548

Alternate gene names: 126447395

Gene position: 1494541-1495770 (Clockwise)

Preceding gene: 126446390

Following gene: 126447363

Centisome position: 63.52

GC content: 70.24

Gene sequence:

>1230_bases
GTGTCCGCCCCGCTCTCGATCGCTTCGGCCCGCGCACTGCATCTCGCCGCGCAGGGCCTCTTGACGCCGCCTCGCCGCAA
GGCGGTCAAGGCCGACGTGCTCGCCGCCGTCCGCCGGATGGGCCAACTGCAGATCGACACGATCCATGTCGTCGCGCGCA
GCCCGTATCTCGTGCTGTTCAGCCGGCTCGGCGCATATGCGCCGCAATGGCTCGACGAACATCTCGCCGACGCGAAACTG
TTCGAGTACTGGTCGCATGAAGCGTGCTTCCTGCCGATCGAGGACTTCGGCCTGATGCGCCACAAGATGCTCAACCCCGT
CGGCATGGGCTGGAAATACGCGGCCGAATGGCACGCGCAGCATCGCGACGCAATCGACGCGCTGCTCGCGCATGTTCGCG
CGCGCGGCCCCGTGCGCTCCGCCGATTTCGCGCGCGGCGCCGGCAAGGGCAACGGCTGGTGGGACTGGAAGCCCGAGAAG
CGGCATCTCGAAGTGCTGTTCTCGACCGGGCAATTGATGGTCGCCGAGCGGCGCAACTTCCAGCGCGTCTACGACGTCGC
CGAACGCGTGCTGCCGGACTGGGACGACGCGCGCGACCTGCCGCCGCGCGCGGCGGTGGTGCCGCGCCTCGTCGGCAACA
CCTGTCGCGCGCTCGGCATCGTCCGCGCGGACTGGATCGCCGATTATTACCGGCTGCCGAAGCGCTCGTATCGCGACGAA
CTGCATGCGCTCGCGGACGCGGGCGAGCTGCTGCCCGTCGCGGTCGACGGCTGGCACGCCGACGCGTTCGTGCATCGCGA
GCTCGCGCCGCTCGTCGACGCCGCGCGCGACGGCGCGCTGCGCCCGACGGTCACGACGCTGCTGTCGCCGTTCGATCCGG
TCGTCTGGGATCGGCGGCGTGCATCGGCGCTGTTCGATTTCGACTACACGATCGAATGCTACACGCCCGCGCACAAGCGT
CGCTACGGCTACTTCTGCCTGCCGATCCTGCACCGCGGGCGGCTCGTCGGCCGCGTCGACGCGAAGGCGCATCGCACGCA
GCGCGTGTTCGAGCTGAAGGCGGTGCACATCGAGCCGGGCGTGCGGCTCGGCGCGGGGCTCGCGGCGGATGTCGGTCGCG
CGATCCGCAAGCTCGCCGACTGGCACGAAACGCCCGTCGTCGAGGCCGGCCACGCGCCGAAGGAGATCGCGCGAGCAATC
GGCGCGGATCGCGTCGCCAAGCCGCGATAG

Upstream 100 bases:

>100_bases
TGTCAGACGCCCGCGCGGCAATGCTTCGCGGCGCGCGGCGCGCCATGCCGATTCGCGCTACAGTGGCGCATCCGTTTCGT
GCGTCCATTCCCCGCCGCTC

Downstream 100 bases:

>100_bases
CGATGCGATGTGGGCGTGCGGGGCGTGCGCGCGCGGCGCGGAATGCGTGGCGGATGCGGCGCGACGAAAACCGGGCAGCG
CATGCCGCGACCGCACGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 409; Mature: 408

Protein sequence:

>409_residues
MSAPLSIASARALHLAAQGLLTPPRRKAVKADVLAAVRRMGQLQIDTIHVVARSPYLVLFSRLGAYAPQWLDEHLADAKL
FEYWSHEACFLPIEDFGLMRHKMLNPVGMGWKYAAEWHAQHRDAIDALLAHVRARGPVRSADFARGAGKGNGWWDWKPEK
RHLEVLFSTGQLMVAERRNFQRVYDVAERVLPDWDDARDLPPRAAVVPRLVGNTCRALGIVRADWIADYYRLPKRSYRDE
LHALADAGELLPVAVDGWHADAFVHRELAPLVDAARDGALRPTVTTLLSPFDPVVWDRRRASALFDFDYTIECYTPAHKR
RYGYFCLPILHRGRLVGRVDAKAHRTQRVFELKAVHIEPGVRLGAGLAADVGRAIRKLADWHETPVVEAGHAPKEIARAI
GADRVAKPR

Sequences:

>Translated_409_residues
MSAPLSIASARALHLAAQGLLTPPRRKAVKADVLAAVRRMGQLQIDTIHVVARSPYLVLFSRLGAYAPQWLDEHLADAKL
FEYWSHEACFLPIEDFGLMRHKMLNPVGMGWKYAAEWHAQHRDAIDALLAHVRARGPVRSADFARGAGKGNGWWDWKPEK
RHLEVLFSTGQLMVAERRNFQRVYDVAERVLPDWDDARDLPPRAAVVPRLVGNTCRALGIVRADWIADYYRLPKRSYRDE
LHALADAGELLPVAVDGWHADAFVHRELAPLVDAARDGALRPTVTTLLSPFDPVVWDRRRASALFDFDYTIECYTPAHKR
RYGYFCLPILHRGRLVGRVDAKAHRTQRVFELKAVHIEPGVRLGAGLAADVGRAIRKLADWHETPVVEAGHAPKEIARAI
GADRVAKPR
>Mature_408_residues
SAPLSIASARALHLAAQGLLTPPRRKAVKADVLAAVRRMGQLQIDTIHVVARSPYLVLFSRLGAYAPQWLDEHLADAKLF
EYWSHEACFLPIEDFGLMRHKMLNPVGMGWKYAAEWHAQHRDAIDALLAHVRARGPVRSADFARGAGKGNGWWDWKPEKR
HLEVLFSTGQLMVAERRNFQRVYDVAERVLPDWDDARDLPPRAAVVPRLVGNTCRALGIVRADWIADYYRLPKRSYRDEL
HALADAGELLPVAVDGWHADAFVHRELAPLVDAARDGALRPTVTTLLSPFDPVVWDRRRASALFDFDYTIECYTPAHKRR
YGYFCLPILHRGRLVGRVDAKAHRTQRVFELKAVHIEPGVRLGAGLAADVGRAIRKLADWHETPVVEAGHAPKEIARAIG
ADRVAKPR

Specific function: Unknown

COG id: COG3214

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787145, Length=395, Percent_Identity=51.8987341772152, Blast_Score=415, Evalue=1e-117,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009351 [H]

Pfam domain/function: PF06224 DUF1006 [H]

EC number: NA

Molecular weight: Translated: 46026; Mature: 45895

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAPLSIASARALHLAAQGLLTPPRRKAVKADVLAAVRRMGQLQIDTIHVVARSPYLVLF
CCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHH
SRLGAYAPQWLDEHLADAKLFEYWSHEACFLPIEDFGLMRHKMLNPVGMGWKYAAEWHAQ
HHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHCCCCCCCCHHHHHHHHH
HRDAIDALLAHVRARGPVRSADFARGAGKGNGWWDWKPEKRHLEVLFSTGQLMVAERRNF
HHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCHHHEEEEEECCCEEEHHHHHH
QRVYDVAERVLPDWDDARDLPPRAAVVPRLVGNTCRALGIVRADWIADYYRLPKRSYRDE
HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
LHALADAGELLPVAVDGWHADAFVHRELAPLVDAARDGALRPTVTTLLSPFDPVVWDRRR
HHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHCCHH
ASALFDFDYTIECYTPAHKRRYGYFCLPILHRGRLVGRVDAKAHRTQRVFELKAVHIEPG
HCEEECCCEEEEEECCHHHCCCCEEEEHHHHCCCEEEECCHHHHHHHHHHEEEEEEECCC
VRLGAGLAADVGRAIRKLADWHETPVVEAGHAPKEIARAIGADRVAKPR
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SAPLSIASARALHLAAQGLLTPPRRKAVKADVLAAVRRMGQLQIDTIHVVARSPYLVLF
CCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHH
SRLGAYAPQWLDEHLADAKLFEYWSHEACFLPIEDFGLMRHKMLNPVGMGWKYAAEWHAQ
HHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHCCCCCCCCHHHHHHHHH
HRDAIDALLAHVRARGPVRSADFARGAGKGNGWWDWKPEKRHLEVLFSTGQLMVAERRNF
HHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCHHHEEEEEECCCEEEHHHHHH
QRVYDVAERVLPDWDDARDLPPRAAVVPRLVGNTCRALGIVRADWIADYYRLPKRSYRDE
HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
LHALADAGELLPVAVDGWHADAFVHRELAPLVDAARDGALRPTVTTLLSPFDPVVWDRRR
HHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHCCHH
ASALFDFDYTIECYTPAHKRRYGYFCLPILHRGRLVGRVDAKAHRTQRVFELKAVHIEPG
HCEEECCCEEEEEECCHHHCCCCEEEEHHHHCCCEEEECCHHHHHHHHHHEEEEEEECCC
VRLGAGLAADVGRAIRKLADWHETPVVEAGHAPKEIARAIGADRVAKPR
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]