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The map label for this gene is sctQ

Identifier: 126447332

GI number: 126447332

Start: 590261

End: 592198

Strand: Direct

Name: sctQ

Synonym: BMA10247_A0636

Alternate gene names: NA

Gene position: 590261-592198 (Clockwise)

Preceding gene: 126446505

Following gene: 126447834

Centisome position: 25.09

GC content: 76.26

Gene sequence:

>1938_bases
ATGAGCGCCGCCGATCTGAGGCCCGTGCGGATCATCGCGGGCGCGCCCGCGGCCGAGCCGGCCGGTGCGCCGGCGCCGCG
AGCCGCGCGGCGCGGCTTCGACTACGCGCAGTTGATGCGGCGCTCGCGCGTCGCGCCGGCCGGCGCGCCCGCGCCGCGCG
GCGACGGCGAACGCCCGCGCGACGCGGCGATGCCGTGGCGCGACGGCGCCGCGCCGTCGTTCGAGCGCGATCCGGCCGCG
CTGCCCGATGCGCTCGGCCGCGAGGCGATGGCGCGCGCGTGCGCGGGCGCCGATGCGTTCGTCAATCAGGTGTTCGCGCA
GCGCGAGCGGGTGGTGCGCGTCGCCGAAGCGTTGGCCGCCGAGATCGCCGCGCTCGGCGGCGGCGACGCGTCGGGCCAGT
GGGAGCAGCCTGCCGCTCGACGCGGCGTTGCTGCCGGATACGGTGCTGCATCTCGTTCTTTCGCGTTTCGACTTGCGGCT
TCGGTTCGAGACGCCGGACGCGGCGACGCGGCACTTACTCTGCACACATGGCGCGACGCTGCACGCGCGACTCGACACGC
TGCTCGCGCATCACGGCGCGCCGCGCACGATCGAGATCGACGTCGGCTGAAACGCGCGCAATCGAACCCGACCGCGACGA
TGAACACCGAGCCGATCGAACTGGAACCCGCTACCGCCGAGCCGCCCGGCATCGACACCGCGCTGCCGCTGCCCGCGTGC
AGCGCGTTCGACGCGGCGCTCGCGCGCATCGTCTGCGACGCGCGGCTCGCCGCCTGGCTCGCGCGCTTTCCGGGGCTGTC
CGACTGGCGCGCGTCGGCGGGCGAGCGGCCGTGCTTCGAGCGCCCCGGCGTGCTCGAGCTGCGGCGCGGCGGCGCGGCCG
CGCACGTCGCGATCGATCTCGCGGCGTTTCCGGCGCTCGAGGTCGTCGCCGCGCCCGCGCTCGACGCGCGCGGCGACGCG
AGCCTCTCGCTGCGCGCGGCGCTCGCGGCGACGCTGCTCGCGCCGCTCGTCGCCGCGTTCGCGGCGGCGGGGCTCGACGG
CGTGACGGTCGGCGCGCTGCGCGCGGTGCCCGCCGCGGCGCTCGACGCGACGCGCTGCATGCTGTCGTTCGCGCTCGACG
GCGCGCCGCTGCGCTGCGCGCTGCTCGATGCGCAAGCGCCGTGGCTCGACGCGCTCGCGGCCCGGCTGCGCGACGAGCGG
CGCCGCGATGCGTCAAGCGGGCTCGCCCGCGTGCGCTTGCCGGGGCGCGTGCGGCTCGGCACGCGCGCGCTGCCGCTCGC
GGTGCTGCGCAGCCTGCGGCCGGGCGACGTGCTGCTCGACATGGTGCCCGCCGCACTGGGCGCCGCGCGGGCGGGCCCGC
TGCATGCGTGGTGGGGCGCGCGGCGCGCGGCCCAATGGCACGCAACCGTTCTGATCGAGGGAACCACGATGACGATGACC
GAAATGCCAGACACCGCCGACGACCTCGACGAGCCGATCGTCGCGGGCGACTTGCCGGCCGATTCCTTGGCCGATTTTCC
GGCCGATTCCCCGGCTGCAGTTCCGGCTGAATTTCCGGCTGAATTTCCGGCCGACCGGGCGGGCGATCTGCCGGCCCCTT
CCGCGGCTCATTCGTCGCCCGGTTCGCTCGCCGGGTTGCCGGCCGGGTTGCAGGCCGACGCGCCGCCGCGCGACGCGCGG
TACGCCGCGCCCGAGCCGGCCGATCTCGGCGAGGTCGCGCTGCCCGTGCACGTCGAGATCGACACGCTGTCGCTGTCGAT
CGCCGAGCTCGCCGCGCTGCGCCCGGGCTACGTGCTCGAGTTGCCGCTCGCCGCGCGCGACGTGCCGGTGCGGCTCGTCG
CATACGGCCAGGCGATCGGCGGCGGCCGCCTCGTCGCGGTGGGCGCGCATCTCGGCGTGCGGATCGACCGGATGGCGGGC
GACGATGGTTCAGTTTAA

Upstream 100 bases:

>100_bases
CGCGGCTCGACTGGCTGCCCGTCTATTCGTATCAGGAGCTCGGCGACCAGGTGCAGTTGCAGCCGGTCGGCCGCGTGACG
ATGCCGACGGCGGCCCACGC

Downstream 100 bases:

>100_bases
CGACATCACCGGCCTCTTGATCGCCGTGCTCGTGATGAGCATGGTGCCGTTCATCGCGATGGTGGTCACCTCGTACGCGA
AGATCGTCGTCGTGCTCGGC

Product: type III secretion inner membrane protein SctQ

Products: NA

Alternate protein names: HrcQ Protein; Type III Secretion Inner Membrane Protein SctQ; Surface Presentation Of Antigens Domain-Containing Protein; Flagellar Motor Switch/Type III Secretory Pathway Protein; Type III Secretion Protein; Hrp Conserved Protein HRCQ

Number of amino acids: Translated: 645; Mature: 644

Protein sequence:

>645_residues
MSAADLRPVRIIAGAPAAEPAGAPAPRAARRGFDYAQLMRRSRVAPAGAPAPRGDGERPRDAAMPWRDGAAPSFERDPAA
LPDALGREAMARACAGADAFVNQVFAQRERVVRVAEALAAEIAALGGGDASGQWEQPAARRGVAAGYGAASRSFAFRLAA
SVRDAGRGDAALTLHTWRDAARATRHAARASRRAAHDRDRRRLKRAQSNPTATMNTEPIELEPATAEPPGIDTALPLPAC
SAFDAALARIVCDARLAAWLARFPGLSDWRASAGERPCFERPGVLELRRGGAAAHVAIDLAAFPALEVVAAPALDARGDA
SLSLRAALAATLLAPLVAAFAAAGLDGVTVGALRAVPAAALDATRCMLSFALDGAPLRCALLDAQAPWLDALAARLRDER
RRDASSGLARVRLPGRVRLGTRALPLAVLRSLRPGDVLLDMVPAALGAARAGPLHAWWGARRAAQWHATVLIEGTTMTMT
EMPDTADDLDEPIVAGDLPADSLADFPADSPAAVPAEFPAEFPADRAGDLPAPSAAHSSPGSLAGLPAGLQADAPPRDAR
YAAPEPADLGEVALPVHVEIDTLSLSIAELAALRPGYVLELPLAARDVPVRLVAYGQAIGGGRLVAVGAHLGVRIDRMAG
DDGSV

Sequences:

>Translated_645_residues
MSAADLRPVRIIAGAPAAEPAGAPAPRAARRGFDYAQLMRRSRVAPAGAPAPRGDGERPRDAAMPWRDGAAPSFERDPAA
LPDALGREAMARACAGADAFVNQVFAQRERVVRVAEALAAEIAALGGGDASGQWEQPAARRGVAAGYGAASRSFAFRLAA
SVRDAGRGDAALTLHTWRDAARATRHAARASRRAAHDRDRRRLKRAQSNPTATMNTEPIELEPATAEPPGIDTALPLPAC
SAFDAALARIVCDARLAAWLARFPGLSDWRASAGERPCFERPGVLELRRGGAAAHVAIDLAAFPALEVVAAPALDARGDA
SLSLRAALAATLLAPLVAAFAAAGLDGVTVGALRAVPAAALDATRCMLSFALDGAPLRCALLDAQAPWLDALAARLRDER
RRDASSGLARVRLPGRVRLGTRALPLAVLRSLRPGDVLLDMVPAALGAARAGPLHAWWGARRAAQWHATVLIEGTTMTMT
EMPDTADDLDEPIVAGDLPADSLADFPADSPAAVPAEFPAEFPADRAGDLPAPSAAHSSPGSLAGLPAGLQADAPPRDAR
YAAPEPADLGEVALPVHVEIDTLSLSIAELAALRPGYVLELPLAARDVPVRLVAYGQAIGGGRLVAVGAHLGVRIDRMAG
DDGSV
>Mature_644_residues
SAADLRPVRIIAGAPAAEPAGAPAPRAARRGFDYAQLMRRSRVAPAGAPAPRGDGERPRDAAMPWRDGAAPSFERDPAAL
PDALGREAMARACAGADAFVNQVFAQRERVVRVAEALAAEIAALGGGDASGQWEQPAARRGVAAGYGAASRSFAFRLAAS
VRDAGRGDAALTLHTWRDAARATRHAARASRRAAHDRDRRRLKRAQSNPTATMNTEPIELEPATAEPPGIDTALPLPACS
AFDAALARIVCDARLAAWLARFPGLSDWRASAGERPCFERPGVLELRRGGAAAHVAIDLAAFPALEVVAAPALDARGDAS
LSLRAALAATLLAPLVAAFAAAGLDGVTVGALRAVPAAALDATRCMLSFALDGAPLRCALLDAQAPWLDALAARLRDERR
RDASSGLARVRLPGRVRLGTRALPLAVLRSLRPGDVLLDMVPAALGAARAGPLHAWWGARRAAQWHATVLIEGTTMTMTE
MPDTADDLDEPIVAGDLPADSLADFPADSPAAVPAEFPAEFPADRAGDLPAPSAAHSSPGSLAGLPAGLQADAPPRDARY
AAPEPADLGEVALPVHVEIDTLSLSIAELAALRPGYVLELPLAARDVPVRLVAYGQAIGGGRLVAVGAHLGVRIDRMAGD
DGSV

Specific function: Unknown

COG id: COG1886

COG function: function code NU; Flagellar motor switch/type III secretory pathway protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 66750; Mature: 66619

Theoretical pI: Translated: 7.00; Mature: 7.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAADLRPVRIIAGAPAAEPAGAPAPRAARRGFDYAQLMRRSRVAPAGAPAPRGDGERPR
CCCCCCCCEEEEECCCCCCCCCCCCCHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCC
DAAMPWRDGAAPSFERDPAALPDALGREAMARACAGADAFVNQVFAQRERVVRVAEALAA
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
EIAALGGGDASGQWEQPAARRGVAAGYGAASRSFAFRLAASVRDAGRGDAALTLHTWRDA
HHHHHCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEHHHHHH
ARATRHAARASRRAAHDRDRRRLKRAQSNPTATMNTEPIELEPATAEPPGIDTALPLPAC
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCEEECCCCCCCCCCCCCCCCCCH
SAFDAALARIVCDARLAAWLARFPGLSDWRASAGERPCFERPGVLELRRGGAAAHVAIDL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCEEECCCCCEEEEEEEH
AAFPALEVVAAPALDARGDASLSLRAALAATLLAPLVAAFAAAGLDGVTVGALRAVPAAA
HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHH
LDATRCMLSFALDGAPLRCALLDAQAPWLDALAARLRDERRRDASSGLARVRLPGRVRLG
HHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCEECC
TRALPLAVLRSLRPGDVLLDMVPAALGAARAGPLHAWWGARRAAQWHATVLIEGTTMTMT
CHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEEEEECCEEEEE
EMPDTADDLDEPIVAGDLPADSLADFPADSPAAVPAEFPAEFPADRAGDLPAPSAAHSSP
CCCCCHHHHCCCCEECCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GSLAGLPAGLQADAPPRDARYAAPEPADLGEVALPVHVEIDTLSLSIAELAALRPGYVLE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEHHHHHHHHHHHCCCCCEEE
LPLAARDVPVRLVAYGQAIGGGRLVAVGAHLGVRIDRMAGDDGSV
CCCCCCCCCEEEEEECCCCCCCEEEEEECCCCEEEEEECCCCCCC
>Mature Secondary Structure 
SAADLRPVRIIAGAPAAEPAGAPAPRAARRGFDYAQLMRRSRVAPAGAPAPRGDGERPR
CCCCCCCEEEEECCCCCCCCCCCCCHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCC
DAAMPWRDGAAPSFERDPAALPDALGREAMARACAGADAFVNQVFAQRERVVRVAEALAA
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
EIAALGGGDASGQWEQPAARRGVAAGYGAASRSFAFRLAASVRDAGRGDAALTLHTWRDA
HHHHHCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEHHHHHH
ARATRHAARASRRAAHDRDRRRLKRAQSNPTATMNTEPIELEPATAEPPGIDTALPLPAC
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCEEECCCCCCCCCCCCCCCCCCH
SAFDAALARIVCDARLAAWLARFPGLSDWRASAGERPCFERPGVLELRRGGAAAHVAIDL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCEEECCCCCEEEEEEEH
AAFPALEVVAAPALDARGDASLSLRAALAATLLAPLVAAFAAAGLDGVTVGALRAVPAAA
HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHH
LDATRCMLSFALDGAPLRCALLDAQAPWLDALAARLRDERRRDASSGLARVRLPGRVRLG
HHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCEECC
TRALPLAVLRSLRPGDVLLDMVPAALGAARAGPLHAWWGARRAAQWHATVLIEGTTMTMT
CHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEEEEECCEEEEE
EMPDTADDLDEPIVAGDLPADSLADFPADSPAAVPAEFPAEFPADRAGDLPAPSAAHSSP
CCCCCHHHHCCCCEECCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GSLAGLPAGLQADAPPRDARYAAPEPADLGEVALPVHVEIDTLSLSIAELAALRPGYVLE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEHHHHHHHHHHHCCCCCEEE
LPLAARDVPVRLVAYGQAIGGGRLVAVGAHLGVRIDRMAGDDGSV
CCCCCCCCCEEEEEECCCCCCCEEEEEECCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA