| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is malT [H]
Identifier: 126447294
GI number: 126447294
Start: 2258981
End: 2261734
Strand: Reverse
Name: malT [H]
Synonym: BMA10247_A2330
Alternate gene names: 126447294
Gene position: 2261734-2258981 (Counterclockwise)
Preceding gene: 126446948
Following gene: 126446635
Centisome position: 96.13
GC content: 74.47
Gene sequence:
>2754_bases ATGCTTGGGCGCAGCCCGCTTCCGACGCCCGCCGACGGCGCCGGCCATTCGATTCGACGCCGTTCCCCGATGCCCCCGAC TGCCCCCGGCGCCGAGCGCGCCGCCACCGAGATCGTGCTCAAGACCGTCGCGCCGCGCGAGCCGCCGCATCTGCTCGCGC GGCCGCGTCTCGGCGCGGGTGACGCCGCGCTCGCCGGTTGCCGCGCCGTGCTCGTGCAGGCGCCGGCGGGTTTCGGCAAG ACGTCGCTGCTCGCGCAGTGGCGGCGCGAGCATCTTTCGCGCGGCACCGCGGTTGCATGGCTGTCCGCCGACGAGCGCGA CGATCCGCGGCGCTTCCTGCTCGCGCTCGTGCAGGCGGTGCGGACCGCGTGCGCGCGGCCGACGTTCGCGCGCACGCTGA CCGACGGGCCGGCCACGCCCGCGCGCGAACTCGAAGGCGTCACCGGCTGGCTCGCGGAGATCGCGCAGTTCTCGCTCGAC GTGCTGCTGATCGTCGACGAGGCGGAGCGCCTGCCCGACGCGGGCCGCCGCGCGCTGACCTACGTGCTGCACAACGCGCC GCAGAACCTGCGGATCGTCGTCGCCGCGCGCCACGGGTTCGATGCGCACGCAGGCGATCTGATCGCCTACGGGCAGTGCC GGCTGATCGGTGCGGACGCGCTGCGCTTTCGGCTCGACGAGACGATCGCGCTCGTCGGCGCGCGCGTCGACGCGGACACG TGCGCGCGGCTGTTCGAGCTGTGCGATGGCTGGCCGCTCGGCCTGCAGCTCGCGCTCGCGGCGATGGAGCGCGCGCCCGA TCTGCGCCTGAGCGTCGAGCCGGCGGCTGCCGTGCCGGGCGCGTTGCGCGACCGGCTCGTCGATGCGCTGATCGCGAAGC TCGCGCCCGACGACGAGCGCTTCCTGACCGGCATCAGCATCGCCGACATGCTGCATCCGGCGCTCTGCCGCGCACTGACG GGCGACGCGCACGCGCCGGAGCGTCTCGCGCGGCTCCTGCGCGAGACGCCGATGTTCACCGCGTCGGACGACGGCCCGTG GTGCCGGCTGCACACGCTCGTGCGCGACGTACTGCGCATGCGGCTTGCGCAATGGCGGGACGACGAGCGCAATCGTCTGC ACGATCGCGCATCGGCATGGCTCGCCGCGCACGGGATGATCGAGGAGGCGGCGCGCCACGCGCATGCGGCCGGCCGGCAT CAGGCGGCGTTCGAGCTGGCCGAGCGATGTCTGCACGACGCGGTGAAGCAAGGGCACTTGCAGGCGATGCTCGACTGGCT CGAGCTGCTGCCGGAGGCCGAACTCGAGCGACGGCCGCGGCTGCGGCTCGCGGCCGCGTGGGCGCTCGCGCTCGGCGAGC GTCACCCCGAGGCGGCGCGGCAGGTCGAGCAGGTGCTCGCGAATCCCGGCGCGAGCGTCGAGCTGCGCTACGAATGCGCG CTGATCCTCAGCGCGGCCGCGTACTACGCGGACGATCCCGACCGCTTCGTCGCGCTGTTCGAGCCGTGGGCGCGGGCCGC GCCCGTCGGCACGCCGTGGCTCGCGCAGGTCCACGCGAACCGGCTCGGCGCGCGCGCGATCCTGCTCGGCGAGCCCGCGC AGGCGCGGCGCTTCCAGTCGGCCGCGCCGCGCGCCGATTGCCGCGGCGAGCACGGCTACGTGGTGCGCTGGGGCGAGTAC ATGACGGGCATGAGCTACCTCTGCGAAGGTCAGCTCCATCTCGCCGAAGAGGTGCTGTTCCCGGCGCTCGCCAGCGCGGA GATCGATCTCGGGCGGCGGCATCCGCTTACGTGCATGCTCGCCGCGCTGTGCGCGACGCTCGCGTATGAGGCGGACCGGA TCGAACAGGCGGCCGCGCTCGTCGCGAACCGGCTCGACGTGCTCGAGCGCGGCGGCACGCCTGAGACGGTCGCGCTCGCG TACCGGACGGCGGCCCGCGTCGCGGCCGCGCGCGGCGCCGAGCATCGCGCGCTCGATCTGCTCGAATCGCTGCATGCGCT CGGCGTCGCGCGGCGGCTGCCGCGGCTATGCGTCGCGAGCCTCGCCGAGCAGGCGCGCATGCACGCGGTCTACTACCGCG CGCAGACCTGCGAGGCGCTCGTGCAGCGGATCGATGACATCATGCGGCGCGAGGCGCCGCGCCGGGGGCCGCTGTGGTGC CGCTCGGCCGCGCTTGCGCAGGCGAGCGCGCACGCGGCGGCGTCCGTCGCCGCGCGCCGCTGGCCGCAGGCGCTCGATGC GCTCGCGCAGGCGGGCGGGCTCGCCTGCGAGATGAAGCTTGGCCGCGAACGCATCGAAAGCATGGCGCTGCGCGCGTTCG CGCTCGAGCAGACAGGCGCGGACGGGCGCGCGCTGCTCGCCGAGGCGATGGATCTCGCCCGGACATTCCATCTGACGCGC ACGCTGGCCGACGCGCATCCGGCCGTGGCCGACTGGGCGCGCCGCGCGCTCGACCAGGCGTCCGTCGCCGGCGGCGGCGC GCGCGCCGCGCCGCGCGTCGTGCGGCCGGCGCAGCGCCCGAAGGCGGGCAGCCCACGCGCGGTGCCGAGCGTCGTGCTGA CGCCGAAGGAGCGCGAGATACTCGAATTGCTCGGGCGCAACCTGTCGAACAAGGAGATCGCGCTGGCGATGACGGTGGGC GAAGAGACCGTCAAATGGCATCTGAAGAACCTGTTCGGCAAGCTCGACGCGAGCTCGCGCAAGCACGCGGTGCGCCGCGC GCTGGTGCTGGGCCTGCTCGAATCGGCCGAGTAG
Upstream 100 bases:
>100_bases GCGCAGCGGAAACGGTGGCGTTCGAATGCATCGTAGCGCCGCGCGTGGGGGCCGCCCCCCTCATCGCGGGGGGGCTTGAC GCTGGCCGGCGATCCGACTC
Downstream 100 bases:
>100_bases GCGCGCGGGCGTCGGGCGCGCGCCGTGTCATCTCGCCGGCCATTTTTTTTCCGCATCTTGCCGGCGTTCGTCCAGCGTTC ATTCGACGTTCATTCGACGT
Product: LuxR family transcriptional regulator
Products: NA
Alternate protein names: ATP-dependent transcriptional activator malT [H]
Number of amino acids: Translated: 917; Mature: 917
Protein sequence:
>917_residues MLGRSPLPTPADGAGHSIRRRSPMPPTAPGAERAATEIVLKTVAPREPPHLLARPRLGAGDAALAGCRAVLVQAPAGFGK TSLLAQWRREHLSRGTAVAWLSADERDDPRRFLLALVQAVRTACARPTFARTLTDGPATPARELEGVTGWLAEIAQFSLD VLLIVDEAERLPDAGRRALTYVLHNAPQNLRIVVAARHGFDAHAGDLIAYGQCRLIGADALRFRLDETIALVGARVDADT CARLFELCDGWPLGLQLALAAMERAPDLRLSVEPAAAVPGALRDRLVDALIAKLAPDDERFLTGISIADMLHPALCRALT GDAHAPERLARLLRETPMFTASDDGPWCRLHTLVRDVLRMRLAQWRDDERNRLHDRASAWLAAHGMIEEAARHAHAAGRH QAAFELAERCLHDAVKQGHLQAMLDWLELLPEAELERRPRLRLAAAWALALGERHPEAARQVEQVLANPGASVELRYECA LILSAAAYYADDPDRFVALFEPWARAAPVGTPWLAQVHANRLGARAILLGEPAQARRFQSAAPRADCRGEHGYVVRWGEY MTGMSYLCEGQLHLAEEVLFPALASAEIDLGRRHPLTCMLAALCATLAYEADRIEQAAALVANRLDVLERGGTPETVALA YRTAARVAAARGAEHRALDLLESLHALGVARRLPRLCVASLAEQARMHAVYYRAQTCEALVQRIDDIMRREAPRRGPLWC RSAALAQASAHAAASVAARRWPQALDALAQAGGLACEMKLGRERIESMALRAFALEQTGADGRALLAEAMDLARTFHLTR TLADAHPAVADWARRALDQASVAGGGARAAPRVVRPAQRPKAGSPRAVPSVVLTPKEREILELLGRNLSNKEIALAMTVG EETVKWHLKNLFGKLDASSRKHAVRRALVLGLLESAE
Sequences:
>Translated_917_residues MLGRSPLPTPADGAGHSIRRRSPMPPTAPGAERAATEIVLKTVAPREPPHLLARPRLGAGDAALAGCRAVLVQAPAGFGK TSLLAQWRREHLSRGTAVAWLSADERDDPRRFLLALVQAVRTACARPTFARTLTDGPATPARELEGVTGWLAEIAQFSLD VLLIVDEAERLPDAGRRALTYVLHNAPQNLRIVVAARHGFDAHAGDLIAYGQCRLIGADALRFRLDETIALVGARVDADT CARLFELCDGWPLGLQLALAAMERAPDLRLSVEPAAAVPGALRDRLVDALIAKLAPDDERFLTGISIADMLHPALCRALT GDAHAPERLARLLRETPMFTASDDGPWCRLHTLVRDVLRMRLAQWRDDERNRLHDRASAWLAAHGMIEEAARHAHAAGRH QAAFELAERCLHDAVKQGHLQAMLDWLELLPEAELERRPRLRLAAAWALALGERHPEAARQVEQVLANPGASVELRYECA LILSAAAYYADDPDRFVALFEPWARAAPVGTPWLAQVHANRLGARAILLGEPAQARRFQSAAPRADCRGEHGYVVRWGEY MTGMSYLCEGQLHLAEEVLFPALASAEIDLGRRHPLTCMLAALCATLAYEADRIEQAAALVANRLDVLERGGTPETVALA YRTAARVAAARGAEHRALDLLESLHALGVARRLPRLCVASLAEQARMHAVYYRAQTCEALVQRIDDIMRREAPRRGPLWC RSAALAQASAHAAASVAARRWPQALDALAQAGGLACEMKLGRERIESMALRAFALEQTGADGRALLAEAMDLARTFHLTR TLADAHPAVADWARRALDQASVAGGGARAAPRVVRPAQRPKAGSPRAVPSVVLTPKEREILELLGRNLSNKEIALAMTVG EETVKWHLKNLFGKLDASSRKHAVRRALVLGLLESAE >Mature_917_residues MLGRSPLPTPADGAGHSIRRRSPMPPTAPGAERAATEIVLKTVAPREPPHLLARPRLGAGDAALAGCRAVLVQAPAGFGK TSLLAQWRREHLSRGTAVAWLSADERDDPRRFLLALVQAVRTACARPTFARTLTDGPATPARELEGVTGWLAEIAQFSLD VLLIVDEAERLPDAGRRALTYVLHNAPQNLRIVVAARHGFDAHAGDLIAYGQCRLIGADALRFRLDETIALVGARVDADT CARLFELCDGWPLGLQLALAAMERAPDLRLSVEPAAAVPGALRDRLVDALIAKLAPDDERFLTGISIADMLHPALCRALT GDAHAPERLARLLRETPMFTASDDGPWCRLHTLVRDVLRMRLAQWRDDERNRLHDRASAWLAAHGMIEEAARHAHAAGRH QAAFELAERCLHDAVKQGHLQAMLDWLELLPEAELERRPRLRLAAAWALALGERHPEAARQVEQVLANPGASVELRYECA LILSAAAYYADDPDRFVALFEPWARAAPVGTPWLAQVHANRLGARAILLGEPAQARRFQSAAPRADCRGEHGYVVRWGEY MTGMSYLCEGQLHLAEEVLFPALASAEIDLGRRHPLTCMLAALCATLAYEADRIEQAAALVANRLDVLERGGTPETVALA YRTAARVAAARGAEHRALDLLESLHALGVARRLPRLCVASLAEQARMHAVYYRAQTCEALVQRIDDIMRREAPRRGPLWC RSAALAQASAHAAASVAARRWPQALDALAQAGGLACEMKLGRERIESMALRAFALEQTGADGRALLAEAMDLARTFHLTR TLADAHPAVADWARRALDQASVAGGGARAAPRVVRPAQRPKAGSPRAVPSVVLTPKEREILELLGRNLSNKEIALAMTVG EETVKWHLKNLFGKLDASSRKHAVRRALVLGLLESAE
Specific function: Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto-oligosaccharides. Binds and recognizes a DNA motif (called the malT box):5'-GGA[TG]GA-3' [H]
COG id: COG2909
COG function: function code K; ATP-dependent transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH luxR-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI2367223, Length=435, Percent_Identity=26.8965517241379, Blast_Score=99, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016032 - InterPro: IPR011990 - InterPro: IPR000792 - InterPro: IPR011991 [H]
Pfam domain/function: PF00196 GerE [H]
EC number: NA
Molecular weight: Translated: 99756; Mature: 99756
Theoretical pI: Translated: 8.41; Mature: 8.41
Prosite motif: PS50043 HTH_LUXR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGRSPLPTPADGAGHSIRRRSPMPPTAPGAERAATEIVLKTVAPREPPHLLARPRLGAG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC DAALAGCRAVLVQAPAGFGKTSLLAQWRREHLSRGTAVAWLSADERDDPRRFLLALVQAV HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHH RTACARPTFARTLTDGPATPARELEGVTGWLAEIAQFSLDVLLIVDEAERLPDAGRRALT HHHHCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCHHHCCCHHHHHHH YVLHNAPQNLRIVVAARHGFDAHAGDLIAYGQCRLIGADALRFRLDETIALVGARVDADT HHHHCCCCCEEEEEEECCCCCCCCCCEEEECCEEEECHHHHHHHHHHHHHHHHCCCCHHH CARLFELCDGWPLGLQLALAAMERAPDLRLSVEPAAAVPGALRDRLVDALIAKLAPDDER HHHHHHHHCCCCHHHHHHHHHHHCCCCCEEECCCHHHCCHHHHHHHHHHHHHHHCCCHHH FLTGISIADMLHPALCRALTGDAHAPERLARLLRETPMFTASDDGPWCRLHTLVRDVLRM HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHH RLAQWRDDERNRLHDRASAWLAAHGMIEEAARHAHAAGRHQAAFELAERCLHDAVKQGHL HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH QAMLDWLELLPEAELERRPRLRLAAAWALALGERHPEAARQVEQVLANPGASVELRYECA HHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEHHHH LILSAAAYYADDPDRFVALFEPWARAAPVGTPWLAQVHANRLGARAILLGEPAQARRFQS HHHHHHHHHCCCHHHEEHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHH AAPRADCRGEHGYVVRWGEYMTGMSYLCEGQLHLAEEVLFPALASAEIDLGRRHPLTCML CCCCCCCCCCCCEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH AALCATLAYEADRIEQAAALVANRLDVLERGGTPETVALAYRTAARVAAARGAEHRALDL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHH LESLHALGVARRLPRLCVASLAEQARMHAVYYRAQTCEALVQRIDDIMRREAPRRGPLWC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH RSAALAQASAHAAASVAARRWPQALDALAQAGGLACEMKLGRERIESMALRAFALEQTGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHCCC DGRALLAEAMDLARTFHLTRTLADAHPAVADWARRALDQASVAGGGARAAPRVVRPAQRP CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCC KAGSPRAVPSVVLTPKEREILELLGRNLSNKEIALAMTVGEETVKWHLKNLFGKLDASSR CCCCCCCCCCEEECCCHHHHHHHHCCCCCCCCEEEEEEECHHHHHHHHHHHHHHCCCCHH KHAVRRALVLGLLESAE HHHHHHHHHHHHHHCCC >Mature Secondary Structure MLGRSPLPTPADGAGHSIRRRSPMPPTAPGAERAATEIVLKTVAPREPPHLLARPRLGAG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC DAALAGCRAVLVQAPAGFGKTSLLAQWRREHLSRGTAVAWLSADERDDPRRFLLALVQAV HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHH RTACARPTFARTLTDGPATPARELEGVTGWLAEIAQFSLDVLLIVDEAERLPDAGRRALT HHHHCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCHHHCCCHHHHHHH YVLHNAPQNLRIVVAARHGFDAHAGDLIAYGQCRLIGADALRFRLDETIALVGARVDADT HHHHCCCCCEEEEEEECCCCCCCCCCEEEECCEEEECHHHHHHHHHHHHHHHHCCCCHHH CARLFELCDGWPLGLQLALAAMERAPDLRLSVEPAAAVPGALRDRLVDALIAKLAPDDER HHHHHHHHCCCCHHHHHHHHHHHCCCCCEEECCCHHHCCHHHHHHHHHHHHHHHCCCHHH FLTGISIADMLHPALCRALTGDAHAPERLARLLRETPMFTASDDGPWCRLHTLVRDVLRM HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHH RLAQWRDDERNRLHDRASAWLAAHGMIEEAARHAHAAGRHQAAFELAERCLHDAVKQGHL HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH QAMLDWLELLPEAELERRPRLRLAAAWALALGERHPEAARQVEQVLANPGASVELRYECA HHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEHHHH LILSAAAYYADDPDRFVALFEPWARAAPVGTPWLAQVHANRLGARAILLGEPAQARRFQS HHHHHHHHHCCCHHHEEHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHH AAPRADCRGEHGYVVRWGEYMTGMSYLCEGQLHLAEEVLFPALASAEIDLGRRHPLTCML CCCCCCCCCCCCEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH AALCATLAYEADRIEQAAALVANRLDVLERGGTPETVALAYRTAARVAAARGAEHRALDL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHH LESLHALGVARRLPRLCVASLAEQARMHAVYYRAQTCEALVQRIDDIMRREAPRRGPLWC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH RSAALAQASAHAAASVAARRWPQALDALAQAGGLACEMKLGRERIESMALRAFALEQTGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHCCC DGRALLAEAMDLARTFHLTRTLADAHPAVADWARRALDQASVAGGGARAAPRVVRPAQRP CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCC KAGSPRAVPSVVLTPKEREILELLGRNLSNKEIALAMTVGEETVKWHLKNLFGKLDASSR CCCCCCCCCCEEECCCHHHHHHHHCCCCCCCCEEEEEEECHHHHHHHHHHHHHHCCCCHH KHAVRRALVLGLLESAE HHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA