Click here to switch to the map view.

The map label for this gene is 126447249

Identifier: 126447249

GI number: 126447249

Start: 539947

End: 540561

Strand: Reverse

Name: 126447249

Synonym: BMA10247_A0594

Alternate gene names: NA

Gene position: 540561-539947 (Counterclockwise)

Preceding gene: 126446779

Following gene: 126445603

Centisome position: 22.98

GC content: 72.03

Gene sequence:

>615_bases
ATGAGCGCCGATGAAATCCGCACACGGCGGCGCAAGCTGCTCGCCGCCGCGCTCGGCGCGGCGCTCGCGCCGGCGCTACC
CGCGCTCGCGGCAACGCAACGCGCGCAGCCGCTCGCCGGCCAGAGCGGCTATCACGGCGGCCTGATCACGCCGCCCGTGC
CGGTGCCCGACATGCCGCTGCGCACCGCGTATGGCCGCGCAACCCGGCTGCGCGCGCTGCTTGCCGGCCGCGTCACCGCG
CTGCAGCTGTTCTACACCGGCTGCTCGTCGACATGCCCGATCCAGGGCGCCGTCTTCCACCGCGTGCAGACGCTGCTCGG
CCCGCATCCGAAGCCGGACATCCAATTGCTGTCGCTGAGCATCAGCCCGCTCGAAGACACGCCGCAGCGCATGCACGCGT
GGCTCGCCCGCTTCGGCGCGCGTCCCGGCTGGATCGCCGCCGCGCCCGAGCTGAAGGATGTCGATGCGTTGCAGGCATTC
TTCGGCGGCGGCCGCACCGGGCTCGACAATCATGGCACCCAGGTGCAGATGATCGACCGGCGCGGCGCGCTCGTCTGGAG
GACTTACGAATTGCCGTCGCCCGAAACGATCGCGGCGCTGCTCGGCCACGCGTGA

Upstream 100 bases:

>100_bases
CTCGATCCGACCTATGTCTTGATCAATGTCGAGATGCCGCGCTACCGCATCGGCGAGCGCGATTGCACCGCGCTCTGGCG
CTTTCTGAACGAGGCCCCGC

Downstream 100 bases:

>100_bases
GCGCGCCGCCCGGGCTCCGCCGGAGCGCCCGCACCGCCTCCCGCGTGCGGCGAATCCCGCGCGGCGCGCGCCGTGCGCTT
CGCGCATGCCGCGCGCGAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 204; Mature: 203

Protein sequence:

>204_residues
MSADEIRTRRRKLLAAALGAALAPALPALAATQRAQPLAGQSGYHGGLITPPVPVPDMPLRTAYGRATRLRALLAGRVTA
LQLFYTGCSSTCPIQGAVFHRVQTLLGPHPKPDIQLLSLSISPLEDTPQRMHAWLARFGARPGWIAAAPELKDVDALQAF
FGGGRTGLDNHGTQVQMIDRRGALVWRTYELPSPETIAALLGHA

Sequences:

>Translated_204_residues
MSADEIRTRRRKLLAAALGAALAPALPALAATQRAQPLAGQSGYHGGLITPPVPVPDMPLRTAYGRATRLRALLAGRVTA
LQLFYTGCSSTCPIQGAVFHRVQTLLGPHPKPDIQLLSLSISPLEDTPQRMHAWLARFGARPGWIAAAPELKDVDALQAF
FGGGRTGLDNHGTQVQMIDRRGALVWRTYELPSPETIAALLGHA
>Mature_203_residues
SADEIRTRRRKLLAAALGAALAPALPALAATQRAQPLAGQSGYHGGLITPPVPVPDMPLRTAYGRATRLRALLAGRVTAL
QLFYTGCSSTCPIQGAVFHRVQTLLGPHPKPDIQLLSLSISPLEDTPQRMHAWLARFGARPGWIAAAPELKDVDALQAFF
GGGRTGLDNHGTQVQMIDRRGALVWRTYELPSPETIAALLGHA

Specific function: Unknown

COG id: COG1999

COG function: function code R; Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21820; Mature: 21688

Theoretical pI: Translated: 10.75; Mature: 10.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSADEIRTRRRKLLAAALGAALAPALPALAATQRAQPLAGQSGYHGGLITPPVPVPDMPL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
RTAYGRATRLRALLAGRVTALQLFYTGCSSTCPIQGAVFHRVQTLLGPHPKPDIQLLSLS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEE
ISPLEDTPQRMHAWLARFGARPGWIAAAPELKDVDALQAFFGGGRTGLDNHGTQVQMIDR
CCCCCCCHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEEC
RGALVWRTYELPSPETIAALLGHA
CCCEEEEEECCCCHHHHHHHHCCC
>Mature Secondary Structure 
SADEIRTRRRKLLAAALGAALAPALPALAATQRAQPLAGQSGYHGGLITPPVPVPDMPL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
RTAYGRATRLRALLAGRVTALQLFYTGCSSTCPIQGAVFHRVQTLLGPHPKPDIQLLSLS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEE
ISPLEDTPQRMHAWLARFGARPGWIAAAPELKDVDALQAFFGGGRTGLDNHGTQVQMIDR
CCCCCCCHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEEC
RGALVWRTYELPSPETIAALLGHA
CCCEEEEEECCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA