| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is 126447077
Identifier: 126447077
GI number: 126447077
Start: 1499449
End: 1501176
Strand: Reverse
Name: 126447077
Synonym: BMA10247_A1554
Alternate gene names: NA
Gene position: 1501176-1499449 (Counterclockwise)
Preceding gene: 126445984
Following gene: 126447599
Centisome position: 63.81
GC content: 59.26
Gene sequence:
>1728_bases GTGGCAGCGCTTGCGACCGTCACGCTGGTTGCGTGCGGCGGCGACGATCCATCGTCTGGTGCCGTGAGCGCCGGCAACTC GCCGGCCATAGTGCCGTCAGTACCCGCCGCAACGCCGGCGACGCCAACCGCGACGGCCGCCGAGTCTGAACAGGACGTGT TCGCAAGAACTGCGCCGGCTGACAAAGTATTGGATGACTCCAACATCTACGACACGACAAAAGACGGTTCCATCGCTTTG TCCAAGGTCAACGAGGATTCGTCGGTCAAGCGACATACGATCACCATCAACGGGAAAGTACTGCCGTATGTCGCGCGTGC CGGGCACCTGGTTGCTTACCGGCAAAACGGGGCGGGCAAGAAAGCCGAGGCGGCGATCTTCTATACGGCGTACACGCGTG ACGCACTGCCCAAGGAGCATCGCCCGGTCACGTTCTTATGGAACGGCGGCCCCGGATCGGCGTCGATCTGGCTGCACATG GGATCGTGGGGCCCGAAACGGCTCAAGTCCGACGCCCCGAACATGGCCGATCCCACGAAGCAGCCCGACAGCTTCCCGTT CGAGGACAATGCGATTTCGCTACTCGACCAGTCGGACATCGTCTTCGTCGATCCGCCGGGGACAGGTCTTTCCACAGCCA TTGCGCCGCTCAAGAACGGCGATCTATGGGGAACCGACGATGATGCCCAAGTGGTTGCCGACTTCATTACGAGCTATACG AACAAGTACAACCGGCAGAGCTCTCCGAAGTACCTGTACGGCGAATCCTACGGCGGTATCCGCACGCCGATCGTCGCCAA CCTGCTGGAGCAGGCAGGTACCAGCGGCTACGTCCCCGATCCGTCCGGCAAGCCGGCCAGGGTGCTGGACGGATTCATCC TCAATTCGCCGCTCGTCGATTACAACTCCAATTGCGACATGATGGGCGGAAGAGTGACGTGCGAGGGTTACATCCCGTCC TACGCCATGACGGCAGACTACTTCAAGAAATCCGTCAAGCGCGGCACGCGAACGCAAGAGCAGTATCTCGGCGAGTTGCG CACGCTGGCGAGAACGACATTCCAGACGACCTACGGAACCTACTTCACCAACGGCAAACCGAACAGCCAATGGAATGCGT ATGCGGCGAGCACGGCGGGACAGGCTCTCCTGAACCGGATCGCCGACTATACCGGTATTCCCGCGTCGACCTGGAACGGC TCGTTCAACTACACGCCGAGGCCGTTTCGAAACGCGCTGGTTCCAGGCTACGAACTCGGGCGCTACGATGCGCGCATGAA GGTACCGAACGGGAACAGCTTCGCGGCGGACAGCTACATCGACGTGGCCTTCCTTAACCAGCTCAAGACGTATTTTCCCG ATTTCGTCAACTACAAGACCCAGTCGATCTACGAGCCGCTCAATAATGCGACGATCAGAAACTGGAAATGGAAGAGGGCC GGGAGCAAATATGATTACCCACAGAGCATTACCGACATTCAAGCCGTTCTGACTGCCAACCCCGATGCCAAGCTGCTGAT TCTTCACGGTTATGAAGATATCGCGACGCCGGGTTTCCAGACCGAACTGGATCTCGAGGGGGTGAACCTGAGCGATCGCA TCCCGGTCAAATGGTTCGAAGGCGGGCATATGATCTACAACACCGAGGCATCGCGCGTGCCGCTGAAGCAGGCGATCGAC AGCTATTACAAGTCGCCGACGCGTATCGCGGACGGTTCCTTACTATAA
Upstream 100 bases:
>100_bases TTCGGGTTGATTGAAGCCGTTGTGTTTTATAAGCATAACGAATGAATTGCACTGATCAGGAGATGGGCAAATGGCTAAAA GAATACCGATTGGGACTACT
Downstream 100 bases:
>100_bases ACTGAGGACAGCTATGAAAATCGTGACCTACTTGGGTTTCACGGTGGCCGCCACCATCATTTCAATGTCAAATCTCGGCG CGGCGTTTGCCTATGACGAC
Product: serine-type carboxypeptidase family protein
Products: NA
Alternate protein names: Serine Carboxypeptidase Family Protein; Carboxypeptidase-Related Protein; Serine Carboxypeptidase; Carboxypeptidase C; Serine-Type Carboxypeptidase Family Protein; S10 Family Peptidase; Carboxypeptidase; S10 Family Carboxypeptidase; Carboxypeptidase-Like Protein; Serine Carboxypeptidase Superfamily; Peptidase S
Number of amino acids: Translated: 575; Mature: 574
Protein sequence:
>575_residues MAALATVTLVACGGDDPSSGAVSAGNSPAIVPSVPAATPATPTATAAESEQDVFARTAPADKVLDDSNIYDTTKDGSIAL SKVNEDSSVKRHTITINGKVLPYVARAGHLVAYRQNGAGKKAEAAIFYTAYTRDALPKEHRPVTFLWNGGPGSASIWLHM GSWGPKRLKSDAPNMADPTKQPDSFPFEDNAISLLDQSDIVFVDPPGTGLSTAIAPLKNGDLWGTDDDAQVVADFITSYT NKYNRQSSPKYLYGESYGGIRTPIVANLLEQAGTSGYVPDPSGKPARVLDGFILNSPLVDYNSNCDMMGGRVTCEGYIPS YAMTADYFKKSVKRGTRTQEQYLGELRTLARTTFQTTYGTYFTNGKPNSQWNAYAASTAGQALLNRIADYTGIPASTWNG SFNYTPRPFRNALVPGYELGRYDARMKVPNGNSFAADSYIDVAFLNQLKTYFPDFVNYKTQSIYEPLNNATIRNWKWKRA GSKYDYPQSITDIQAVLTANPDAKLLILHGYEDIATPGFQTELDLEGVNLSDRIPVKWFEGGHMIYNTEASRVPLKQAID SYYKSPTRIADGSLL
Sequences:
>Translated_575_residues MAALATVTLVACGGDDPSSGAVSAGNSPAIVPSVPAATPATPTATAAESEQDVFARTAPADKVLDDSNIYDTTKDGSIAL SKVNEDSSVKRHTITINGKVLPYVARAGHLVAYRQNGAGKKAEAAIFYTAYTRDALPKEHRPVTFLWNGGPGSASIWLHM GSWGPKRLKSDAPNMADPTKQPDSFPFEDNAISLLDQSDIVFVDPPGTGLSTAIAPLKNGDLWGTDDDAQVVADFITSYT NKYNRQSSPKYLYGESYGGIRTPIVANLLEQAGTSGYVPDPSGKPARVLDGFILNSPLVDYNSNCDMMGGRVTCEGYIPS YAMTADYFKKSVKRGTRTQEQYLGELRTLARTTFQTTYGTYFTNGKPNSQWNAYAASTAGQALLNRIADYTGIPASTWNG SFNYTPRPFRNALVPGYELGRYDARMKVPNGNSFAADSYIDVAFLNQLKTYFPDFVNYKTQSIYEPLNNATIRNWKWKRA GSKYDYPQSITDIQAVLTANPDAKLLILHGYEDIATPGFQTELDLEGVNLSDRIPVKWFEGGHMIYNTEASRVPLKQAID SYYKSPTRIADGSLL >Mature_574_residues AALATVTLVACGGDDPSSGAVSAGNSPAIVPSVPAATPATPTATAAESEQDVFARTAPADKVLDDSNIYDTTKDGSIALS KVNEDSSVKRHTITINGKVLPYVARAGHLVAYRQNGAGKKAEAAIFYTAYTRDALPKEHRPVTFLWNGGPGSASIWLHMG SWGPKRLKSDAPNMADPTKQPDSFPFEDNAISLLDQSDIVFVDPPGTGLSTAIAPLKNGDLWGTDDDAQVVADFITSYTN KYNRQSSPKYLYGESYGGIRTPIVANLLEQAGTSGYVPDPSGKPARVLDGFILNSPLVDYNSNCDMMGGRVTCEGYIPSY AMTADYFKKSVKRGTRTQEQYLGELRTLARTTFQTTYGTYFTNGKPNSQWNAYAASTAGQALLNRIADYTGIPASTWNGS FNYTPRPFRNALVPGYELGRYDARMKVPNGNSFAADSYIDVAFLNQLKTYFPDFVNYKTQSIYEPLNNATIRNWKWKRAG SKYDYPQSITDIQAVLTANPDAKLLILHGYEDIATPGFQTELDLEGVNLSDRIPVKWFEGGHMIYNTEASRVPLKQAIDS YYKSPTRIADGSLL
Specific function: Unknown
COG id: COG2939
COG function: function code E; Carboxypeptidase C (cathepsin A)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62628; Mature: 62497
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: PS00131 CARBOXYPEPT_SER_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAALATVTLVACGGDDPSSGAVSAGNSPAIVPSVPAATPATPTATAAESEQDVFARTAPA CCCEEEEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHEECCCH DKVLDDSNIYDTTKDGSIALSKVNEDSSVKRHTITINGKVLPYVARAGHLVAYRQNGAGK HHHCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCEEEEEECCCCEEEEEECCCCCC KAEAAIFYTAYTRDALPKEHRPVTFLWNGGPGSASIWLHMGSWGPKRLKSDAPNMADPTK CCCEEEEEEEECCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCHHHHHCCCCCCCCCCC QPDSFPFEDNAISLLDQSDIVFVDPPGTGLSTAIAPLKNGDLWGTDDDAQVVADFITSYT CCCCCCCCCCCEEEECCCCEEEECCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH NKYNRQSSPKYLYGESYGGIRTPIVANLLEQAGTSGYVPDPSGKPARVLDGFILNSPLVD HHHCCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCC YNSNCDMMGGRVTCEGYIPSYAMTADYFKKSVKRGTRTQEQYLGELRTLARTTFQTTYGT CCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCE YFTNGKPNSQWNAYAASTAGQALLNRIADYTGIPASTWNGSFNYTPRPFRNALVPGYELG EEECCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCC RYDARMKVPNGNSFAADSYIDVAFLNQLKTYFPDFVNYKTQSIYEPLNNATIRNWKWKRA CCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCHHHCCCHHHHHHHHCCCEECCEEECCC GSKYDYPQSITDIQAVLTANPDAKLLILHGYEDIATPGFQTELDLEGVNLSDRIPVKWFE CCCCCCCCHHHHHHHEEECCCCCEEEEEECCHHHCCCCCCEEEEECCCCCCCCCCEEEEC GGHMIYNTEASRVPLKQAIDSYYKSPTRIADGSLL CCEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure AALATVTLVACGGDDPSSGAVSAGNSPAIVPSVPAATPATPTATAAESEQDVFARTAPA CCEEEEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHEECCCH DKVLDDSNIYDTTKDGSIALSKVNEDSSVKRHTITINGKVLPYVARAGHLVAYRQNGAGK HHHCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCEEEEEECCCCEEEEEECCCCCC KAEAAIFYTAYTRDALPKEHRPVTFLWNGGPGSASIWLHMGSWGPKRLKSDAPNMADPTK CCCEEEEEEEECCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCHHHHHCCCCCCCCCCC QPDSFPFEDNAISLLDQSDIVFVDPPGTGLSTAIAPLKNGDLWGTDDDAQVVADFITSYT CCCCCCCCCCCEEEECCCCEEEECCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH NKYNRQSSPKYLYGESYGGIRTPIVANLLEQAGTSGYVPDPSGKPARVLDGFILNSPLVD HHHCCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCC YNSNCDMMGGRVTCEGYIPSYAMTADYFKKSVKRGTRTQEQYLGELRTLARTTFQTTYGT CCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCE YFTNGKPNSQWNAYAASTAGQALLNRIADYTGIPASTWNGSFNYTPRPFRNALVPGYELG EEECCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCC RYDARMKVPNGNSFAADSYIDVAFLNQLKTYFPDFVNYKTQSIYEPLNNATIRNWKWKRA CCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCHHHCCCHHHHHHHHCCCEECCEEECCC GSKYDYPQSITDIQAVLTANPDAKLLILHGYEDIATPGFQTELDLEGVNLSDRIPVKWFE CCCCCCCCHHHHHHHEEECCCCCEEEEEECCHHHCCCCCCEEEEECCCCCCCCCCEEEEC GGHMIYNTEASRVPLKQAIDSYYKSPTRIADGSLL CCEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA