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The map label for this gene is 126447075

Identifier: 126447075

GI number: 126447075

Start: 1732700

End: 1733839

Strand: Reverse

Name: 126447075

Synonym: BMA10247_A1796

Alternate gene names: NA

Gene position: 1733839-1732700 (Counterclockwise)

Preceding gene: 126446207

Following gene: 126447858

Centisome position: 73.7

GC content: 71.4

Gene sequence:

>1140_bases
ATGAGACATTCGGCCCGCCTGCTGGCCTGCGGCGCGCTCTGCGCCACCGCCGCGCATGCGCACGCGCAATCGAGCGTCAC
GCTATACGGCATCGTCGACACCGGCATCGAATTCGTTTCGCACGCGAGCGCGAAGGGCGGTTCCGCGTGGCGCATGCCGG
CCGTCACGGGCGAGCTGCCGTCGCGCTGGGGCTTGCGCGGCGTCGAGGATTTCGGCGGCGGCTATCGCGCGCTCTTCGCG
CTCGAAAGCGGCTTCAACCTGCGCGGCGGCGAGCTCGGCCAGGGCGGGCGACTGTTCGGGCGTCAGGCATACGTGGGCCT
GCGCGCGCCGTTCGGCACGCTCGCGTTCGGCCGGCAATACATGATGACTTATGTCGCGCTGCAGGGCGCGGACATCATCG
GCCCCGACATCTACGGGCTCGGCTCGCTCGACGCTTACATCCCGAACGGCCGCGCGGACAACGCGGTGACCTATGTCGGC
AGCTATCGCGGCGTGACGCTCGGCGCCGGCTATTCGTTCGGCCGCGACTCGGCAGGCACCGGCAATTCGCCGGGGCAGGG
CACGTGCGTCGGCTCGGTGCCGGGGCGCGCGGTCGAATGCCGGAGCGGGTCGGCGATGCTGAAGTACGACGCCGAGCGCT
TCGGCGTGGCCGCGTCGTACGAAGAGCAGCGCGGCGGCGCGAACGCGGCGGCGAACTTCTTCGACGGTGCCGCGCCGATG
CCGATCACAAGCAGTGCGGACAAGGACACGCGCGCGCACGTGAGCGCGTACGCGAACGCGGGGCCGGTCAAGCTCGGCGC
GGGCTGGATCGGCCGGCGCGTGTCGACCGACGCACCCGCCGCGCCCGACGTGCGCACCGATCTGTTCTTCGTCGGCGCCG
CCTATCGCGCGACGCCGTTCGTGACGATCGACGGCGAAGCCTACCGGATCGTCGATGCGCGGCACGACGCGCGCGCGACG
ATGGCGACGCTGCGCGCGAGCTTCTCGCTGTCGAAGCGCACCGCCGTCTATGCGCAGACCGCGTACCTATGGAACAGCGT
GCACGCGCGCTATTCGGTGAGCGGCGGCGGAGGCGGCACGACGCCCGCGGCCGGCGTCGGCCAGCTCGGCGCGATGGTCG
GCGTTCGGCACATGTTCTGA

Upstream 100 bases:

>100_bases
CCGAACCACCGGGCCGCATTCGGCCGTTCGAATCGCTTCACCCCGACACCGGCCGGCACGCGCCGGCCACGACAAACGAC
AAAGACGGAGACTTTCCATC

Downstream 100 bases:

>100_bases
GCCCGCGCGGCCGTCGTGCGTTCTCCGTCGGTATTTCATCCGTTATCCGAACTTTCAGGAAGGGAGCTGAACATGCGATT
CATGCAGATCATGCGCCGGG

Product: putative outer membrane porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 379

Protein sequence:

>379_residues
MRHSARLLACGALCATAAHAHAQSSVTLYGIVDTGIEFVSHASAKGGSAWRMPAVTGELPSRWGLRGVEDFGGGYRALFA
LESGFNLRGGELGQGGRLFGRQAYVGLRAPFGTLAFGRQYMMTYVALQGADIIGPDIYGLGSLDAYIPNGRADNAVTYVG
SYRGVTLGAGYSFGRDSAGTGNSPGQGTCVGSVPGRAVECRSGSAMLKYDAERFGVAASYEEQRGGANAAANFFDGAAPM
PITSSADKDTRAHVSAYANAGPVKLGAGWIGRRVSTDAPAAPDVRTDLFFVGAAYRATPFVTIDGEAYRIVDARHDARAT
MATLRASFSLSKRTAVYAQTAYLWNSVHARYSVSGGGGGTTPAAGVGQLGAMVGVRHMF

Sequences:

>Translated_379_residues
MRHSARLLACGALCATAAHAHAQSSVTLYGIVDTGIEFVSHASAKGGSAWRMPAVTGELPSRWGLRGVEDFGGGYRALFA
LESGFNLRGGELGQGGRLFGRQAYVGLRAPFGTLAFGRQYMMTYVALQGADIIGPDIYGLGSLDAYIPNGRADNAVTYVG
SYRGVTLGAGYSFGRDSAGTGNSPGQGTCVGSVPGRAVECRSGSAMLKYDAERFGVAASYEEQRGGANAAANFFDGAAPM
PITSSADKDTRAHVSAYANAGPVKLGAGWIGRRVSTDAPAAPDVRTDLFFVGAAYRATPFVTIDGEAYRIVDARHDARAT
MATLRASFSLSKRTAVYAQTAYLWNSVHARYSVSGGGGGTTPAAGVGQLGAMVGVRHMF
>Mature_379_residues
MRHSARLLACGALCATAAHAHAQSSVTLYGIVDTGIEFVSHASAKGGSAWRMPAVTGELPSRWGLRGVEDFGGGYRALFA
LESGFNLRGGELGQGGRLFGRQAYVGLRAPFGTLAFGRQYMMTYVALQGADIIGPDIYGLGSLDAYIPNGRADNAVTYVG
SYRGVTLGAGYSFGRDSAGTGNSPGQGTCVGSVPGRAVECRSGSAMLKYDAERFGVAASYEEQRGGANAAANFFDGAAPM
PITSSADKDTRAHVSAYANAGPVKLGAGWIGRRVSTDAPAAPDVRTDLFFVGAAYRATPFVTIDGEAYRIVDARHDARAT
MATLRASFSLSKRTAVYAQTAYLWNSVHARYSVSGGGGGTTPAAGVGQLGAMVGVRHMF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 39362; Mature: 39362

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHSARLLACGALCATAAHAHAQSSVTLYGIVDTGIEFVSHASAKGGSAWRMPAVTGELP
CCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHCCCCCCCEEECCCCCCCCC
SRWGLRGVEDFGGGYRALFALESGFNLRGGELGQGGRLFGRQAYVGLRAPFGTLAFGRQY
CCCCCCCHHHHCCCEEEEEEEECCCCCCCCCCCCCCCEECCEEEEEECCCCCHHHHHHHH
MMTYVALQGADIIGPDIYGLGSLDAYIPNGRADNAVTYVGSYRGVTLGAGYSFGRDSAGT
HHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCEEEEEECCCCEEEECCCCCCCCCCCC
GNSPGQGTCVGSVPGRAVECRSGSAMLKYDAERFGVAASYEEQRGGANAAANFFDGAAPM
CCCCCCCEEEECCCCCEEEECCCCEEEEECHHHHCEEECCHHHCCCCCHHHHHCCCCCCC
PITSSADKDTRAHVSAYANAGPVKLGAGWIGRRVSTDAPAAPDVRTDLFFVGAAYRATPF
CCCCCCCCCHHHHHHHHCCCCCEEECCCHHCCCCCCCCCCCCCCCCEEEEEEEHHCCCEE
VTIDGEAYRIVDARHDARATMATLRASFSLSKRTAVYAQTAYLWNSVHARYSVSGGGGGT
EEECCCEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHCEEEEECCCCCCC
TPAAGVGQLGAMVGVRHMF
CCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MRHSARLLACGALCATAAHAHAQSSVTLYGIVDTGIEFVSHASAKGGSAWRMPAVTGELP
CCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHCCCCCCCEEECCCCCCCCC
SRWGLRGVEDFGGGYRALFALESGFNLRGGELGQGGRLFGRQAYVGLRAPFGTLAFGRQY
CCCCCCCHHHHCCCEEEEEEEECCCCCCCCCCCCCCCEECCEEEEEECCCCCHHHHHHHH
MMTYVALQGADIIGPDIYGLGSLDAYIPNGRADNAVTYVGSYRGVTLGAGYSFGRDSAGT
HHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCEEEEEECCCCEEEECCCCCCCCCCCC
GNSPGQGTCVGSVPGRAVECRSGSAMLKYDAERFGVAASYEEQRGGANAAANFFDGAAPM
CCCCCCCEEEECCCCCEEEECCCCEEEEECHHHHCEEECCHHHCCCCCHHHHHCCCCCCC
PITSSADKDTRAHVSAYANAGPVKLGAGWIGRRVSTDAPAAPDVRTDLFFVGAAYRATPF
CCCCCCCCCHHHHHHHHCCCCCEEECCCHHCCCCCCCCCCCCCCCCEEEEEEEHHCCCEE
VTIDGEAYRIVDARHDARATMATLRASFSLSKRTAVYAQTAYLWNSVHARYSVSGGGGGT
EEECCCEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHCEEEEECCCCCCC
TPAAGVGQLGAMVGVRHMF
CCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1658537; 12910271 [H]