| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is yfeT [C]
Identifier: 126447050
GI number: 126447050
Start: 1511777
End: 1512637
Strand: Reverse
Name: yfeT [C]
Synonym: BMA10247_A1569
Alternate gene names: 126447050
Gene position: 1512637-1511777 (Counterclockwise)
Preceding gene: 126446600
Following gene: 126446099
Centisome position: 64.29
GC content: 70.5
Gene sequence:
>861_bases ATGCCCGCCGATTTCGACGAACTCGCGTCCCTGATTCGGGCGCAATTTTCCGAGCTGAGCCCGCAATTCCAGGTGGGCGC GGCGTTCCTGCTCGATCATCCCGACGAGGTGGCCGTGTCGTCGATGCGCAAGGTCGCGCAGCGCGCGAATGTGCAGCCGG CCTCGCTCGTGCGGCTCGCGCAGCAGTTCGGCTTTCCGGGCTGGAACGAACTGCGCGACCTGTTCGTCGCGCGCGTGCGC ACGCGGCCGCAGCCGCTCACGCAGCGCGCGCGCTCGCTCGTGAAGCCGAATGCGAAGGCGTCGCTCGCGGCCGATCTGCT CGCCGCGCAGCGGCACAACCTCGAGGCGAGCGCCGCGCAGAACGCGCGGGCGCTCGCCGAGGCGGCGAAGCTGATCCGCA AGGCCGCGCACGTGCATGTCGCGGGCTTCCGCTCGTGCTACCCGGTCGCGTTCGGGTTCGTCTACGGCTATCGGCTGTTC CGGCCGACGGTGTCGCTGCTCACGGGCGTCGCGGGCTCGCTCGACATGGAGCTGCGCACGATCGCGAAGAACAGCGTGAC CGTGGTCGTCAGCTTCGCGCCGTATTCGGCCGAAGCGACGCGCGTCGCGCAGGCGGCGCGCGCGCAGGGCGGCAGGATCG TCGCGATCACCGACAGCGCGGTGTCGCCGATCGCGCTGCACGCGGATGCGCAACTGATCTTCACGCACGACAGCCCGTCG TTCTTCCCGTCGCTCGTCGCCGCGCATGCGCTCGTGGAGACGCTCGTCGCACAACTGCTCGCGCTCGAGGGCGGCGAGGC GATCGCGGCGCTCGAGCAGGCCGAGGCCGAATTGCACGCGAAGGGCGCCTACGTCGTCTGA
Upstream 100 bases:
>100_bases GGTGGATGCTTAGCGGCGGCTTAAAGCGGCGCGGCGTCGGCGCCGTCGCCGGCGAGGGAGCGGGTGATACCATGTCCGAT CGACTTTCCGAGCGATCACG
Downstream 100 bases:
>100_bases CATGCCGCCGCGTACTCGCGGCATGCGAAAAGCCTTTCGCCTCGCCCTATCCGGCGCGCATGGATTTCCTGCGGCGAATT TGAATATTAAATCGCTCCAC
Product: RpiR family phosphosugar-binding transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator RpiR Family; Transcriptional Regulator; Sugar Isomerase; Bifunctional Protein Glk; Transcription Regulator Protein; GlvR Family Transcriptional Regulator; RpiR Family Regulatory; SIS Domain-Containing Protein; Transcriptional Regulator RpiR Family Protein
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MPADFDELASLIRAQFSELSPQFQVGAAFLLDHPDEVAVSSMRKVAQRANVQPASLVRLAQQFGFPGWNELRDLFVARVR TRPQPLTQRARSLVKPNAKASLAADLLAAQRHNLEASAAQNARALAEAAKLIRKAAHVHVAGFRSCYPVAFGFVYGYRLF RPTVSLLTGVAGSLDMELRTIAKNSVTVVVSFAPYSAEATRVAQAARAQGGRIVAITDSAVSPIALHADAQLIFTHDSPS FFPSLVAAHALVETLVAQLLALEGGEAIAALEQAEAELHAKGAYVV
Sequences:
>Translated_286_residues MPADFDELASLIRAQFSELSPQFQVGAAFLLDHPDEVAVSSMRKVAQRANVQPASLVRLAQQFGFPGWNELRDLFVARVR TRPQPLTQRARSLVKPNAKASLAADLLAAQRHNLEASAAQNARALAEAAKLIRKAAHVHVAGFRSCYPVAFGFVYGYRLF RPTVSLLTGVAGSLDMELRTIAKNSVTVVVSFAPYSAEATRVAQAARAQGGRIVAITDSAVSPIALHADAQLIFTHDSPS FFPSLVAAHALVETLVAQLLALEGGEAIAALEQAEAELHAKGAYVV >Mature_285_residues PADFDELASLIRAQFSELSPQFQVGAAFLLDHPDEVAVSSMRKVAQRANVQPASLVRLAQQFGFPGWNELRDLFVARVRT RPQPLTQRARSLVKPNAKASLAADLLAAQRHNLEASAAQNARALAEAAKLIRKAAHVHVAGFRSCYPVAFGFVYGYRLFR PTVSLLTGVAGSLDMELRTIAKNSVTVVVSFAPYSAEATRVAQAARAQGGRIVAITDSAVSPIALHADAQLIFTHDSPSF FPSLVAAHALVETLVAQLLALEGGEAIAALEQAEAELHAKGAYVV
Specific function: Unknown
COG id: COG1737
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30573; Mature: 30442
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: PS51071 HTH_RPIR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPADFDELASLIRAQFSELSPQFQVGAAFLLDHPDEVAVSSMRKVAQRANVQPASLVRLA CCCCHHHHHHHHHHHHHHCCCCHHHCCHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHH QQFGFPGWNELRDLFVARVRTRPQPLTQRARSLVKPNAKASLAADLLAAQRHNLEASAAQ HHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHH NARALAEAAKLIRKAAHVHVAGFRSCYPVAFGFVYGYRLFRPTVSLLTGVAGSLDMELRT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH IAKNSVTVVVSFAPYSAEATRVAQAARAQGGRIVAITDSAVSPIALHADAQLIFTHDSPS HCCCCEEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCEEEECCCEEEEECCCCH FFPSLVAAHALVETLVAQLLALEGGEAIAALEQAEAELHAKGAYVV HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure PADFDELASLIRAQFSELSPQFQVGAAFLLDHPDEVAVSSMRKVAQRANVQPASLVRLA CCCHHHHHHHHHHHHHHCCCCHHHCCHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHH QQFGFPGWNELRDLFVARVRTRPQPLTQRARSLVKPNAKASLAADLLAAQRHNLEASAAQ HHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHH NARALAEAAKLIRKAAHVHVAGFRSCYPVAFGFVYGYRLFRPTVSLLTGVAGSLDMELRT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH IAKNSVTVVVSFAPYSAEATRVAQAARAQGGRIVAITDSAVSPIALHADAQLIFTHDSPS HCCCCEEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCEEEECCCEEEEECCCCH FFPSLVAAHALVETLVAQLLALEGGEAIAALEQAEAELHAKGAYVV HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA