Definition Burkholderia mallei NCTC 10247 chromosome II, complete genome.
Accession NC_009079
Length 2,352,693

Click here to switch to the map view.

The map label for this gene is 126447041

Identifier: 126447041

GI number: 126447041

Start: 615320

End: 617047

Strand: Direct

Name: 126447041

Synonym: BMA10247_A0665

Alternate gene names: NA

Gene position: 615320-617047 (Clockwise)

Preceding gene: 126446857

Following gene: 126446314

Centisome position: 26.15

GC content: 69.68

Gene sequence:

>1728_bases
ATGCGTTTCGTGCTTTCGCGCCGCCGCGCGCGCGGCTTCGCGCTGATCGAGATGCTCGGCGCGCTCGCGATCGCCGCGCT
GCTGCTTGCCGGCATCGCGGCGATGATGGACAGCTCGCTCGACGACGTGCGCGCGCAGCAGGCCGCGCAATACCAGGCGC
AGGTGACGGCCGCGGCCACGCGTGCGCTCAAGCGTGACTACGACGCATGGCTGCAGCGCGCGAACGCGCAGACGCCCGTC
GTGATGACGCTTGCCGATTTGCAGGCGACGAACGATCTGCCCGCCGCGCTACAGACACGCAACGCGTACGGCCAGCACAC
GTGCGTGCTCGTCAAGCGCACCGCGAACGGCGTCGGACTCGACGCGCTCGTCGTGACGACGGGCGGCGAGGCGATCGGCG
ACAAGGAGCTCGGGCTCGTCGCCGCGAGCGCGGGGCCGGGCGGCGGCTCGATCGCCACGAGCGCGCCCGCGCTCGCGCGC
GGCGCGTTCGACGCGTGGCGCATGCCGCTCGGCGCCTACCTCGGCGGCAGCTCGCCGACGTGCGATCCGGCCGACGCCGC
GCCGCCGAACGCCGGCCATCTCGCCAACGAGATCTTCTTCAACGGGCCGAGCCAGCAGATCAACAGCGATTACCTGTACC
GCGTCGGCGTCGGCGGCCATCCGGAGGCGAACGCGATGCAGGTGCCGATCTGGCTCACGCACACGTTCGTCGAAGGCGCC
GCCGACGCGGCGAACTGCGGCGCGGCCGGCAGCTATGCGAACGGCAAGCTCGGCGCGGACGCGGCCGGACAGTTGCTGAG
CTGCAGGAACGGCGTGTGGCGCGGCGCCGGCGGTCACTGGAAGGACCCGGTCAGGACGGCCGACGATCTGCCCACCGACG
CATCGAACGAAACCGGCGACGTGCGCCTCACGCTCGACACGTTCCGCGCGTTCGCGTGGACGGGCAACGCGTGGCAGGCG
CTCGCCGTGGACCAGAACGGCAACATGATCGTGCCGGGCGTCGTCTCCGCGAACCAGTACGAGATCACCGGGCGCGTCGT
CGTCAACACGCCGTGCGCGCCGGAGCCGAGCCGGCCGAACGCGGGGCTCGTGTCGATGGGCCAGGACGGGCAGGTGCTGT
CCTGCCAGGGCGGCAAGTGGCTGCCGCAATCGGGGATCAAGATCGGCGGCACCGAAACGGCGTGCGAGATCCTGATGGAG
ACGCCCGGCGCGACGGATTTCTCGTGCGGGTACACCTACCGCGGCCCCTATCCGAATCCGCCGCTCATCACCTACGAGCC
CGACGGCACGTACACGTACACGATCAACCGGCCGGTGAAGCTCGACAACAACGGGCTCATCGCGGTGAGCGCGTACATGC
ACATGAGCTACGCGACGTGCGCGCTGAAAGGGCGGGAAGGACAGATGCGTCTCGTCGTCGACGTGATCGACGTTCAGAGC
AACCAGGTGATCGCGCACAGCGAGGCGCAGTCGACGAAGCTGATCGAGGACGCCGCGACGATCAACGTCACGCTGAATCA
GGCCGCCGAGCCGCGCAGCGGCTACACGGTCAGGCTGTCGAGCAAGTGGGCGACGTACGACAGCTATGCGGGCACGCCGT
GGACGTCGAGCTATTGCAGCGGCGGCAAGACGTTTCTCCAGACGCCGCTCGTGACCGGCTGGACGATCTTCGTTCTATTG
AACGGCGCTTCGCCGCGCGTGGCCGCCGCCGCGCGGCGCTGCGGTTAA

Upstream 100 bases:

>100_bases
CCGGTCGGGCGGATCCGAACGCGCCCGCGAGCGGCGTGCCGCTGCCCGCGGGGCTCGCGATCGCCGACGGCCTGCCGGTC
TGGATGGGGCAGGCGTACTG

Downstream 100 bases:

>100_bases
CTGCAGGGGTCTCCCATTCGCGGCGCGCGCCCGTCCGAGCGACGGCGCGCGCCCCCACCGGACGGACCCATGAAGGCCAA
GATTCCCGTTTTGCTGTCCC

Product: type IV prepilin

Products: NA

Alternate protein names: Type IV Prepilin PilV Protein; Type IV B Pilus Protein; Type IV Pilus Biogenesis Protein PilV; Type IV Pilus Protein PilV

Number of amino acids: Translated: 575; Mature: 575

Protein sequence:

>575_residues
MRFVLSRRRARGFALIEMLGALAIAALLLAGIAAMMDSSLDDVRAQQAAQYQAQVTAAATRALKRDYDAWLQRANAQTPV
VMTLADLQATNDLPAALQTRNAYGQHTCVLVKRTANGVGLDALVVTTGGEAIGDKELGLVAASAGPGGGSIATSAPALAR
GAFDAWRMPLGAYLGGSSPTCDPADAAPPNAGHLANEIFFNGPSQQINSDYLYRVGVGGHPEANAMQVPIWLTHTFVEGA
ADAANCGAAGSYANGKLGADAAGQLLSCRNGVWRGAGGHWKDPVRTADDLPTDASNETGDVRLTLDTFRAFAWTGNAWQA
LAVDQNGNMIVPGVVSANQYEITGRVVVNTPCAPEPSRPNAGLVSMGQDGQVLSCQGGKWLPQSGIKIGGTETACEILME
TPGATDFSCGYTYRGPYPNPPLITYEPDGTYTYTINRPVKLDNNGLIAVSAYMHMSYATCALKGREGQMRLVVDVIDVQS
NQVIAHSEAQSTKLIEDAATINVTLNQAAEPRSGYTVRLSSKWATYDSYAGTPWTSSYCSGGKTFLQTPLVTGWTIFVLL
NGASPRVAAAARRCG

Sequences:

>Translated_575_residues
MRFVLSRRRARGFALIEMLGALAIAALLLAGIAAMMDSSLDDVRAQQAAQYQAQVTAAATRALKRDYDAWLQRANAQTPV
VMTLADLQATNDLPAALQTRNAYGQHTCVLVKRTANGVGLDALVVTTGGEAIGDKELGLVAASAGPGGGSIATSAPALAR
GAFDAWRMPLGAYLGGSSPTCDPADAAPPNAGHLANEIFFNGPSQQINSDYLYRVGVGGHPEANAMQVPIWLTHTFVEGA
ADAANCGAAGSYANGKLGADAAGQLLSCRNGVWRGAGGHWKDPVRTADDLPTDASNETGDVRLTLDTFRAFAWTGNAWQA
LAVDQNGNMIVPGVVSANQYEITGRVVVNTPCAPEPSRPNAGLVSMGQDGQVLSCQGGKWLPQSGIKIGGTETACEILME
TPGATDFSCGYTYRGPYPNPPLITYEPDGTYTYTINRPVKLDNNGLIAVSAYMHMSYATCALKGREGQMRLVVDVIDVQS
NQVIAHSEAQSTKLIEDAATINVTLNQAAEPRSGYTVRLSSKWATYDSYAGTPWTSSYCSGGKTFLQTPLVTGWTIFVLL
NGASPRVAAAARRCG
>Mature_575_residues
MRFVLSRRRARGFALIEMLGALAIAALLLAGIAAMMDSSLDDVRAQQAAQYQAQVTAAATRALKRDYDAWLQRANAQTPV
VMTLADLQATNDLPAALQTRNAYGQHTCVLVKRTANGVGLDALVVTTGGEAIGDKELGLVAASAGPGGGSIATSAPALAR
GAFDAWRMPLGAYLGGSSPTCDPADAAPPNAGHLANEIFFNGPSQQINSDYLYRVGVGGHPEANAMQVPIWLTHTFVEGA
ADAANCGAAGSYANGKLGADAAGQLLSCRNGVWRGAGGHWKDPVRTADDLPTDASNETGDVRLTLDTFRAFAWTGNAWQA
LAVDQNGNMIVPGVVSANQYEITGRVVVNTPCAPEPSRPNAGLVSMGQDGQVLSCQGGKWLPQSGIKIGGTETACEILME
TPGATDFSCGYTYRGPYPNPPLITYEPDGTYTYTINRPVKLDNNGLIAVSAYMHMSYATCALKGREGQMRLVVDVIDVQS
NQVIAHSEAQSTKLIEDAATINVTLNQAAEPRSGYTVRLSSKWATYDSYAGTPWTSSYCSGGKTFLQTPLVTGWTIFVLL
NGASPRVAAAARRCG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60445; Mature: 60445

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFVLSRRRARGFALIEMLGALAIAALLLAGIAAMMDSSLDDVRAQQAAQYQAQVTAAAT
CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
RALKRDYDAWLQRANAQTPVVMTLADLQATNDLPAALQTRNAYGQHTCVLVKRTANGVGL
HHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHCCCCCCEEEEEEEECCCCCCE
DALVVTTGGEAIGDKELGLVAASAGPGGGSIATSAPALARGAFDAWRMPLGAYLGGSSPT
EEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHCCHHHHHCCHHHEECCCCCC
CDPADAAPPNAGHLANEIFFNGPSQQINSDYLYRVGVGGHPEANAMQVPIWLTHTFVEGA
CCCCCCCCCCCCHHHHHEEECCCCHHCCCCEEEEECCCCCCCCCCEEEEEEEEEHHHHCC
ADAANCGAAGSYANGKLGADAAGQLLSCRNGVWRGAGGHWKDPVRTADDLPTDASNETGD
CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
VRLTLDTFRAFAWTGNAWQALAVDQNGNMIVPGVVSANQYEITGRVVVNTPCAPEPSRPN
EEEEHHHCEEEEEECCCEEEEEEECCCCEEECCEECCCEEEEEEEEEEECCCCCCCCCCC
AGLVSMGQDGQVLSCQGGKWLPQSGIKIGGTETACEILMETPGATDFSCGYTYRGPYPNP
CCEEEECCCCCEEEECCCCCCCCCCCEECCCHHHHHHHCCCCCCCCCCCCCEECCCCCCC
PLITYEPDGTYTYTINRPVKLDNNGLIAVSAYMHMSYATCALKGREGQMRLVVDVIDVQS
CEEEECCCCCEEEEECCCEEECCCCEEEEEEEHHHEEEEEEEECCCCCEEEEEEEEECCC
NQVIAHSEAQSTKLIEDAATINVTLNQAAEPRSGYTVRLSSKWATYDSYAGTPWTSSYCS
CEEEEECCCCHHHHEECCEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHC
GGKTFLQTPLVTGWTIFVLLNGASPRVAAAARRCG
CCCHHHHCCCCCCEEEEEEEECCCCHHHHHHHHCC
>Mature Secondary Structure
MRFVLSRRRARGFALIEMLGALAIAALLLAGIAAMMDSSLDDVRAQQAAQYQAQVTAAAT
CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
RALKRDYDAWLQRANAQTPVVMTLADLQATNDLPAALQTRNAYGQHTCVLVKRTANGVGL
HHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHCCCCCCEEEEEEEECCCCCCE
DALVVTTGGEAIGDKELGLVAASAGPGGGSIATSAPALARGAFDAWRMPLGAYLGGSSPT
EEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHCCHHHHHCCHHHEECCCCCC
CDPADAAPPNAGHLANEIFFNGPSQQINSDYLYRVGVGGHPEANAMQVPIWLTHTFVEGA
CCCCCCCCCCCCHHHHHEEECCCCHHCCCCEEEEECCCCCCCCCCEEEEEEEEEHHHHCC
ADAANCGAAGSYANGKLGADAAGQLLSCRNGVWRGAGGHWKDPVRTADDLPTDASNETGD
CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
VRLTLDTFRAFAWTGNAWQALAVDQNGNMIVPGVVSANQYEITGRVVVNTPCAPEPSRPN
EEEEHHHCEEEEEECCCEEEEEEECCCCEEECCEECCCEEEEEEEEEEECCCCCCCCCCC
AGLVSMGQDGQVLSCQGGKWLPQSGIKIGGTETACEILMETPGATDFSCGYTYRGPYPNP
CCEEEECCCCCEEEECCCCCCCCCCCEECCCHHHHHHHCCCCCCCCCCCCCEECCCCCCC
PLITYEPDGTYTYTINRPVKLDNNGLIAVSAYMHMSYATCALKGREGQMRLVVDVIDVQS
CEEEECCCCCEEEEECCCEEECCCCEEEEEEEHHHEEEEEEEECCCCCEEEEEEEEECCC
NQVIAHSEAQSTKLIEDAATINVTLNQAAEPRSGYTVRLSSKWATYDSYAGTPWTSSYCS
CEEEEECCCCHHHHEECCEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHC
GGKTFLQTPLVTGWTIFVLLNGASPRVAAAARRCG
CCCHHHHCCCCCCEEEEEEEECCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA