| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is 126447014
Identifier: 126447014
GI number: 126447014
Start: 1423796
End: 1425058
Strand: Direct
Name: 126447014
Synonym: BMA10247_A1467
Alternate gene names: NA
Gene position: 1423796-1425058 (Clockwise)
Preceding gene: 126446630
Following gene: 126447329
Centisome position: 60.52
GC content: 76.09
Gene sequence:
>1263_bases ATGGCCTCGCTGCTGTTCGTCGCCCACGGCGCCGCCGGCGCCGAGCCGCCGCGCGCGGCGCTGCTCGCGGCCGGATGCAA GACGCTCGCCGAGCGCGTGCACGCGCTTCCCGGCTCGGGGCCCGTCTTTCTCGGCAGCTACGAGCCCGCGCCCGGCGGCG CGGCGCTCGCGGGCGCGCTGACGCAGGCCGCGTTCGTCTATGACAACGCGCTCGCGAGCATCGCGCTCATTGCCTGCCAC CGCCCCGGCGACGCGCGCCGCATCGCCGACGCGATCCTGCAGGCGAGCCGGCAGGATCGCCACTACCGCGACGCGCGCGT GCGCAACGCGTACCGCGCGGGTGCGCTGCCGCCGGGGCCCGCACCGCTGCCCGGCTGGTGGGACACGCCGAGCAAGCGCT GGTTCGAGGACGCCTATCAGGCGGGCACCGCGACCGGCAACGTCGCGTGGGCCGCGCTGTCGCTGCTCGCCGTGTACGAA GCGACGCGCGAGCGGCGCTATCTCGACGGCGCCGCCGCGCTGATGGGCTGGGTCGACCCCGGCCGGCTCGACGCGACGGC GCCGGCCGGCTACGTCGGCGGCGAGTTCGGCCATGAGCCGCAGCCGCTCCGCCAGGGCTGGAAATCCACCGAGCACAACG TCGATGCGTACGCCGTCTTCCGCTGGCTCGCGGCGCGCACGGGCGACGCCCGCTGGCACGCGGTCGCCGGGCGCGCGCGG CGCTTCGTGTCGGCGATGTGGGAGCCGGGCGACGGCCGCTTCCTGATCGGCACGCGCGACGACGGGCACACGCCGAACAC CGGGCCGTCCGCGCTCGACGCGTCGCTCTGGCCGCTGCTCGCGATGCCGGATGCGCCCGCCGACTGGCGCCGCTCGCTCG CGTGGGTCGAGCGCGCGCATCGCATCGACGGCGGCTACGGCTTCAACGCGCATCCGGACGGTGTCTGGACCGAAGGCACC GCGCAGGCGGCGCTCGCGTTGCAGGCGGCCGGCCGCTCGGACGACGCGCGGCCGCTGTGGGCGCTGCTGATGTCGCAGCG CGCGCCGTCCGGCCTGCTGTTTGCGACGCCCGAGCCGAGCATTCGCACCGGCCTGTCGATCGGGCCGACGTCCAAGACCG ACGATTTCCGCTACTTCCATCTGCCGCACCTGAGCGCGACCGCGTGGGCCGTGCTCGCGGCGGCGGGCTGGAATCCGTTT CGCCCCGGCGGCTGCCTCGCCGCGGGCTACCCGGGCGACGCCGCCCCTGCCTGCGGAGCATGA
Upstream 100 bases:
>100_bases ACGATCTGAAATCGGCGGCCTGAGCGCGCGCAGCCCCATGCCGATGAGATTTCACCTCGTCCGCCGCCTGGGCCGTGCGG CATCGTTCGCGATCGGGCCG
Downstream 100 bases:
>100_bases CGATGTTCGACTTCTTTCTCGCCAACCGCTCGCTCCTCGACATCAACGGCGGCGTGCTGCTCGTCGTGCTGCTGCTCACG CGCGCCGGCAGGCGCGAACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 420; Mature: 419
Protein sequence:
>420_residues MASLLFVAHGAAGAEPPRAALLAAGCKTLAERVHALPGSGPVFLGSYEPAPGGAALAGALTQAAFVYDNALASIALIACH RPGDARRIADAILQASRQDRHYRDARVRNAYRAGALPPGPAPLPGWWDTPSKRWFEDAYQAGTATGNVAWAALSLLAVYE ATRERRYLDGAAALMGWVDPGRLDATAPAGYVGGEFGHEPQPLRQGWKSTEHNVDAYAVFRWLAARTGDARWHAVAGRAR RFVSAMWEPGDGRFLIGTRDDGHTPNTGPSALDASLWPLLAMPDAPADWRRSLAWVERAHRIDGGYGFNAHPDGVWTEGT AQAALALQAAGRSDDARPLWALLMSQRAPSGLLFATPEPSIRTGLSIGPTSKTDDFRYFHLPHLSATAWAVLAAAGWNPF RPGGCLAAGYPGDAAPACGA
Sequences:
>Translated_420_residues MASLLFVAHGAAGAEPPRAALLAAGCKTLAERVHALPGSGPVFLGSYEPAPGGAALAGALTQAAFVYDNALASIALIACH RPGDARRIADAILQASRQDRHYRDARVRNAYRAGALPPGPAPLPGWWDTPSKRWFEDAYQAGTATGNVAWAALSLLAVYE ATRERRYLDGAAALMGWVDPGRLDATAPAGYVGGEFGHEPQPLRQGWKSTEHNVDAYAVFRWLAARTGDARWHAVAGRAR RFVSAMWEPGDGRFLIGTRDDGHTPNTGPSALDASLWPLLAMPDAPADWRRSLAWVERAHRIDGGYGFNAHPDGVWTEGT AQAALALQAAGRSDDARPLWALLMSQRAPSGLLFATPEPSIRTGLSIGPTSKTDDFRYFHLPHLSATAWAVLAAAGWNPF RPGGCLAAGYPGDAAPACGA >Mature_419_residues ASLLFVAHGAAGAEPPRAALLAAGCKTLAERVHALPGSGPVFLGSYEPAPGGAALAGALTQAAFVYDNALASIALIACHR PGDARRIADAILQASRQDRHYRDARVRNAYRAGALPPGPAPLPGWWDTPSKRWFEDAYQAGTATGNVAWAALSLLAVYEA TRERRYLDGAAALMGWVDPGRLDATAPAGYVGGEFGHEPQPLRQGWKSTEHNVDAYAVFRWLAARTGDARWHAVAGRARR FVSAMWEPGDGRFLIGTRDDGHTPNTGPSALDASLWPLLAMPDAPADWRRSLAWVERAHRIDGGYGFNAHPDGVWTEGTA QAALALQAAGRSDDARPLWALLMSQRAPSGLLFATPEPSIRTGLSIGPTSKTDDFRYFHLPHLSATAWAVLAAAGWNPFR PGGCLAAGYPGDAAPACGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44503; Mature: 44372
Theoretical pI: Translated: 8.03; Mature: 8.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASLLFVAHGAAGAEPPRAALLAAGCKTLAERVHALPGSGPVFLGSYEPAPGGAALAGAL CCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCHHHHHHH TQAAFVYDNALASIALIACHRPGDARRIADAILQASRQDRHYRDARVRNAYRAGALPPGP HHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC APLPGWWDTPSKRWFEDAYQAGTATGNVAWAALSLLAVYEATRERRYLDGAAALMGWVDP CCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GRLDATAPAGYVGGEFGHEPQPLRQGWKSTEHNVDAYAVFRWLAARTGDARWHAVAGRAR CCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHH RFVSAMWEPGDGRFLIGTRDDGHTPNTGPSALDASLWPLLAMPDAPADWRRSLAWVERAH HHHHHHCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHEEECCCCCHHHHHHHHHHHHHH RIDGGYGFNAHPDGVWTEGTAQAALALQAAGRSDDARPLWALLMSQRAPSGLLFATPEPS HCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEECCCCC IRTGLSIGPTSKTDDFRYFHLPHLSATAWAVLAAAGWNPFRPGGCLAAGYPGDAAPACGA HHCCCEECCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCC >Mature Secondary Structure ASLLFVAHGAAGAEPPRAALLAAGCKTLAERVHALPGSGPVFLGSYEPAPGGAALAGAL CCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCHHHHHHH TQAAFVYDNALASIALIACHRPGDARRIADAILQASRQDRHYRDARVRNAYRAGALPPGP HHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC APLPGWWDTPSKRWFEDAYQAGTATGNVAWAALSLLAVYEATRERRYLDGAAALMGWVDP CCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GRLDATAPAGYVGGEFGHEPQPLRQGWKSTEHNVDAYAVFRWLAARTGDARWHAVAGRAR CCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHH RFVSAMWEPGDGRFLIGTRDDGHTPNTGPSALDASLWPLLAMPDAPADWRRSLAWVERAH HHHHHHCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHEEECCCCCHHHHHHHHHHHHHH RIDGGYGFNAHPDGVWTEGTAQAALALQAAGRSDDARPLWALLMSQRAPSGLLFATPEPS HCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEECCCCC IRTGLSIGPTSKTDDFRYFHLPHLSATAWAVLAAAGWNPFRPGGCLAAGYPGDAAPACGA HHCCCEECCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA