| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is lysN [H]
Identifier: 126447000
GI number: 126447000
Start: 1572561
End: 1573676
Strand: Reverse
Name: lysN [H]
Synonym: BMA10247_A1632
Alternate gene names: 126447000
Gene position: 1573676-1572561 (Counterclockwise)
Preceding gene: 126446634
Following gene: 262192867
Centisome position: 66.89
GC content: 74.1
Gene sequence:
>1116_bases ATGACGCTCGCCGCCGCCGTCGATTATCCGTTCGCCGCGCCGTTCGCCGATCCGCAGGGCTCGCCGATCCGCGAGCTGTT CAAGCACGTCGGCAAGCCGGGGATGATCTCGTTCGCGGGCGGCTATCCGTCCGCCGAGCTGTTCGACCGCGAGGGCATCG CGGCGGCGTTCGCCGACGCGGCCCGCGACGATCCGGTGGCCTGCCTGCAATATGGCGACACCGCCGGCCAGCCCGGCCTG CGCGCCGCGCTCGCCGACTGGATGACGCGCGCGCGCGGCGTCGCGTGCGACGCTTCGCAGGTGCTCGTCACGACGGGCTC GCAGCAAGGCTTCGATCTGCTCGTGCGCGCGCTGATCGAGCCGGGCGACGTCGCGCTCGTCGAGGCGCCCGCGTATCCGG CCGCGCTGCAGGCGCTGCGGCTCGCGGGCGCGAAGCTCGTGCCGGTGCGCACCGATGCCGACGGCGTCGACCCCGACGCG CTCGCCGCGCAGCTTGCCGCGTGGCCCGCGGCCGAGCGCCGTCCGAAGCTGCTGTATACGGTGCCGACGTTCGCGAATCC GACCGGCGCGACGCTGCCGCCGGCGCGCCGCGCGCGGCTCGCGGCGGTCGCGGCCGACGCGCGGCTCGTGCTCGTCGAGG ACGATCCGTACGCGGACCTGCGTTTCGCCGGCGAGCCCGTGAAGCCCGTGCTCGCGCATGACGGCGCATCGGACTGGACC GTCTATCTCGGCAGCCTGTCGAAAATCGTCGCGCCGGGCCTGCGGATCGGCTGGGCGGTCGCGCCCGCCGCGGTTCTGCG CCGGATGACCGTGGCGAAGCAGACGAGCGATTTGTGCACCGCGCCGATCGCGCAGGAAGCGATCCGCCGCTACCTGGCGA GCGGCCGGCTTGCCGCGCATTTGCGCACGATCGCGCAGACTTACGGCAGCCGTTGCCGCGCGCTCGTGAGCGCGCTCGAG CACAACGTGATGTACGTGCCGGGCGCGGCGTTCTACGCGCGCGACGCGGATGCGGGCAGCCTGCGGCTGTCGTTCGCCGC GCCGGGCGAAGCGGAGATTTTCGAGGGCGTGCGCCGGCTGCGCGCGGCGCTCGCGGCGTGCCGCCAGCGCACGTGA
Upstream 100 bases:
>100_bases CGCGGGCAATGCGACCGGCATCTTCAAGATGACGGCCGCGGCCTGATTCGCAGCGTCCCCGATTCGCCTGTTGCCCGACT TCCATCGCACCGGAGCCGCC
Downstream 100 bases:
>100_bases CGCACGTGCGGCGGGAGCGCCGCGCGCCGGGCACGCGAGCCCGCCGATAGGCCGAATGGCCGGTGCGCTTGCATGCGGCG CGCGAACGCGGTCCAATCGA
Product: aminotransferase family protein
Products: NA
Alternate protein names: 2-aminoadipate aminotransferase; Alpha-aminoadipate aminotransferase; AAA-AT; AadAT [H]
Number of amino acids: Translated: 371; Mature: 370
Protein sequence:
>371_residues MTLAAAVDYPFAAPFADPQGSPIRELFKHVGKPGMISFAGGYPSAELFDREGIAAAFADAARDDPVACLQYGDTAGQPGL RAALADWMTRARGVACDASQVLVTTGSQQGFDLLVRALIEPGDVALVEAPAYPAALQALRLAGAKLVPVRTDADGVDPDA LAAQLAAWPAAERRPKLLYTVPTFANPTGATLPPARRARLAAVAADARLVLVEDDPYADLRFAGEPVKPVLAHDGASDWT VYLGSLSKIVAPGLRIGWAVAPAAVLRRMTVAKQTSDLCTAPIAQEAIRRYLASGRLAAHLRTIAQTYGSRCRALVSALE HNVMYVPGAAFYARDADAGSLRLSFAAPGEAEIFEGVRRLRAALAACRQRT
Sequences:
>Translated_371_residues MTLAAAVDYPFAAPFADPQGSPIRELFKHVGKPGMISFAGGYPSAELFDREGIAAAFADAARDDPVACLQYGDTAGQPGL RAALADWMTRARGVACDASQVLVTTGSQQGFDLLVRALIEPGDVALVEAPAYPAALQALRLAGAKLVPVRTDADGVDPDA LAAQLAAWPAAERRPKLLYTVPTFANPTGATLPPARRARLAAVAADARLVLVEDDPYADLRFAGEPVKPVLAHDGASDWT VYLGSLSKIVAPGLRIGWAVAPAAVLRRMTVAKQTSDLCTAPIAQEAIRRYLASGRLAAHLRTIAQTYGSRCRALVSALE HNVMYVPGAAFYARDADAGSLRLSFAAPGEAEIFEGVRRLRAALAACRQRT >Mature_370_residues TLAAAVDYPFAAPFADPQGSPIRELFKHVGKPGMISFAGGYPSAELFDREGIAAAFADAARDDPVACLQYGDTAGQPGLR AALADWMTRARGVACDASQVLVTTGSQQGFDLLVRALIEPGDVALVEAPAYPAALQALRLAGAKLVPVRTDADGVDPDAL AAQLAAWPAAERRPKLLYTVPTFANPTGATLPPARRARLAAVAADARLVLVEDDPYADLRFAGEPVKPVLAHDGASDWTV YLGSLSKIVAPGLRIGWAVAPAAVLRRMTVAKQTSDLCTAPIAQEAIRRYLASGRLAAHLRTIAQTYGSRCRALVSALEH NVMYVPGAAFYARDADAGSLRLSFAAPGEAEIFEGVRRLRAALAACRQRT
Specific function: Catalyzes the transfer of an amino group between 2- oxoadipate (2-OA) and glutamate (Glu) to yield alpha-aminodipate (AAA). It can also transaminate glutamate, leucine, and aromatic amino acids. It also conbtributes in the biosynthesis of other amino acid
COG id: COG1167
COG function: function code KE; Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI7705897, Length=324, Percent_Identity=30.2469135802469, Blast_Score=137, Evalue=2e-32, Organism=Homo sapiens, GI33469970, Length=324, Percent_Identity=30.2469135802469, Blast_Score=137, Evalue=2e-32, Organism=Escherichia coli, GI1787710, Length=333, Percent_Identity=28.8288288288288, Blast_Score=126, Evalue=3e-30, Organism=Escherichia coli, GI1790797, Length=301, Percent_Identity=28.2392026578073, Blast_Score=117, Evalue=1e-27, Organism=Escherichia coli, GI1788722, Length=271, Percent_Identity=28.4132841328413, Blast_Score=74, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6321236, Length=326, Percent_Identity=27.6073619631902, Blast_Score=115, Evalue=1e-26, Organism=Saccharomyces cerevisiae, GI6321929, Length=295, Percent_Identity=24.0677966101695, Blast_Score=94, Evalue=2e-20, Organism=Drosophila melanogaster, GI21356535, Length=264, Percent_Identity=23.8636363636364, Blast_Score=101, Evalue=1e-21,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004839 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.6.1.39 [H]
Molecular weight: Translated: 39083; Mature: 38952
Theoretical pI: Translated: 8.19; Mature: 8.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLAAAVDYPFAAPFADPQGSPIRELFKHVGKPGMISFAGGYPSAELFDREGIAAAFADA CCEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEECCCCCCHHHHCCCCHHHHHHHH ARDDPVACLQYGDTAGQPGLRAALADWMTRARGVACDASQVLVTTGSQQGFDLLVRALIE CCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHCC PGDVALVEAPAYPAALQALRLAGAKLVPVRTDADGVDPDALAAQLAAWPAAERRPKLLYT CCCEEEEECCCCHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCEEEE VPTFANPTGATLPPARRARLAAVAADARLVLVEDDPYADLRFAGEPVKPVLAHDGASDWT CCCCCCCCCCCCCCHHHHHHHEEECCCEEEEECCCCCCCEEECCCCCCHHHHCCCCCCHH VYLGSLSKIVAPGLRIGWAVAPAAVLRRMTVAKQTSDLCTAPIAQEAIRRYLASGRLAAH HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHH LRTIAQTYGSRCRALVSALEHNVMYVPGAAFYARDADAGSLRLSFAAPGEAEIFEGVRRL HHHHHHHHHHHHHHHHHHHHCCEEEECCCCEEECCCCCCCEEEEECCCCHHHHHHHHHHH RAALAACRQRT HHHHHHHHCCC >Mature Secondary Structure TLAAAVDYPFAAPFADPQGSPIRELFKHVGKPGMISFAGGYPSAELFDREGIAAAFADA CEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEECCCCCCHHHHCCCCHHHHHHHH ARDDPVACLQYGDTAGQPGLRAALADWMTRARGVACDASQVLVTTGSQQGFDLLVRALIE CCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHCC PGDVALVEAPAYPAALQALRLAGAKLVPVRTDADGVDPDALAAQLAAWPAAERRPKLLYT CCCEEEEECCCCHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCEEEE VPTFANPTGATLPPARRARLAAVAADARLVLVEDDPYADLRFAGEPVKPVLAHDGASDWT CCCCCCCCCCCCCCHHHHHHHEEECCCEEEEECCCCCCCEEECCCCCCHHHHCCCCCCHH VYLGSLSKIVAPGLRIGWAVAPAAVLRRMTVAKQTSDLCTAPIAQEAIRRYLASGRLAAH HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHH LRTIAQTYGSRCRALVSALEHNVMYVPGAAFYARDADAGSLRLSFAAPGEAEIFEGVRRL HHHHHHHHHHHHHHHHHHHHCCEEEECCCCEEECCCCCCCEEEEECCCCHHHHHHHHHHH RAALAACRQRT HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA