| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
Click here to switch to the map view.
The map label for this gene is 126446872
Identifier: 126446872
GI number: 126446872
Start: 251843
End: 252271
Strand: Direct
Name: 126446872
Synonym: BMA10247_A0288
Alternate gene names: NA
Gene position: 251843-252271 (Clockwise)
Preceding gene: 126446518
Following gene: 126447146
Centisome position: 10.7
GC content: 65.27
Gene sequence:
>429_bases ATGAAAAGAACAATCCGGAAAAGCTGGGCGGCGCTCGTGCCGCTGCTCGTCGCAGGCTCGGTCTGCGCCGCCGCGCCGCT GTGCCAGACCCAGAAGCTCGGCGCGCACACGTCGAAGATGTGCGTCGAGCAGACGCCGTTCAAGCACGATTACTACACGC TGTGGGTCGACGATTCGCCGATCTTCATGCTGCCCGACGACTACGTCGAGAAGGTCGCGCTCACGCACACGGTGCCGGAG GACGGCGCGATCGAGTTTCCGCTGTCGAAGCAGGGCACGCCCACCGTGACGATTTCGGGCGGCTGCGCGCCCGTGAGCGA GACGCAGGGCAAGGGCGCGGACGCGGTGAACCTCGAGACCGGACGCGTGTGCTCGTTCAACTGGGGCAAGGAGCCCGTCG TCAAGGATCTGCGCTTCAGCTTCGAGTAA
Upstream 100 bases:
>100_bases TTCGTTTGTAAGATAGCGGTCGCCGCGCGCGGCCCTGAGAGCGCGCGGCGTCGTGCGAAACGGCATGACCTCCCTCCCGC CATTCCTTTTCGAGTCGAAA
Downstream 100 bases:
>100_bases GCGGCGCGATACGGCGGGCGATGCGCCGCGCAGCGGGCGAGATCGCGCGATAGCGCGGCGCGCGTGCCGGCGCACGGCGC CGTGCTTGGCGAGCGCCCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MKRTIRKSWAALVPLLVAGSVCAAAPLCQTQKLGAHTSKMCVEQTPFKHDYYTLWVDDSPIFMLPDDYVEKVALTHTVPE DGAIEFPLSKQGTPTVTISGGCAPVSETQGKGADAVNLETGRVCSFNWGKEPVVKDLRFSFE
Sequences:
>Translated_142_residues MKRTIRKSWAALVPLLVAGSVCAAAPLCQTQKLGAHTSKMCVEQTPFKHDYYTLWVDDSPIFMLPDDYVEKVALTHTVPE DGAIEFPLSKQGTPTVTISGGCAPVSETQGKGADAVNLETGRVCSFNWGKEPVVKDLRFSFE >Mature_142_residues MKRTIRKSWAALVPLLVAGSVCAAAPLCQTQKLGAHTSKMCVEQTPFKHDYYTLWVDDSPIFMLPDDYVEKVALTHTVPE DGAIEFPLSKQGTPTVTISGGCAPVSETQGKGADAVNLETGRVCSFNWGKEPVVKDLRFSFE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15476; Mature: 15476
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRTIRKSWAALVPLLVAGSVCAAAPLCQTQKLGAHTSKMCVEQTPFKHDYYTLWVDDSP CCCHHHHHHHHHHHHHHHCHHHHHCCCCCCHHCCCCHHHHHHHCCCCCCCEEEEEECCCC IFMLPDDYVEKVALTHTVPEDGAIEFPLSKQGTPTVTISGGCAPVSETQGKGADAVNLET EEECCHHHHHHHHHEECCCCCCCEECCCCCCCCCEEEECCCCCCCCCCCCCCCCEEECCC GRVCSFNWGKEPVVKDLRFSFE CCEEEECCCCCHHHHHHEECCC >Mature Secondary Structure MKRTIRKSWAALVPLLVAGSVCAAAPLCQTQKLGAHTSKMCVEQTPFKHDYYTLWVDDSP CCCHHHHHHHHHHHHHHHCHHHHHCCCCCCHHCCCCHHHHHHHCCCCCCCEEEEEECCCC IFMLPDDYVEKVALTHTVPEDGAIEFPLSKQGTPTVTISGGCAPVSETQGKGADAVNLET EEECCHHHHHHHHHEECCCCCCCEECCCCCCCCCEEEECCCCCCCCCCCCCCCCEEECCC GRVCSFNWGKEPVVKDLRFSFE CCEEEECCCCCHHHHHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA