| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is iaaA [H]
Identifier: 126446834
GI number: 126446834
Start: 1329115
End: 1330161
Strand: Reverse
Name: iaaA [H]
Synonym: BMA10247_A1362
Alternate gene names: 126446834
Gene position: 1330161-1329115 (Counterclockwise)
Preceding gene: 126446471
Following gene: 126447782
Centisome position: 56.54
GC content: 73.54
Gene sequence:
>1047_bases ATGACTTCACCCGCAATCGTTGCGATTCACGGCGGCGCAGGCACGATCCTGCGCGAGGCGATGACGGCCGACGCCGAAGC GCAGTACCGTGCGGAGCTCGCCGCGATCCTCGCCGCCGCGCAGAAGGTGCTCGCCGAAGGCGGCAGCGCGCTTGACGCGG TCAGCGTCGCCGTGCGCATGCTCGAGGATTGCCCGCTTTTCAACGCGGGGCGCGGCGCCGTCTACACGGCGGACGGCACG CACGAGCTCGACGCCGCGATCATGGACGGCGCGACGCTCGCGGCGGGCGCGATCTGCTGCGCGACGCGCGTGCGCAACCC GGTGCTCGCCGCGCGCCGCGTGCTCGAAGCGAGCGAGCATGTGATGTTCGCGGGCGCGGGCGCCGACGCGTTCGCGGCTG CGCAGGGGCTCGAGCTCGCGCCGCCGGGCTACTTCGACACCGAGCCGCGCCGCGCGCAATGGCTGAAGGCGCGACGCGCG GCGGGCACGATGCTCGATCACGACGCGGCGGCGTTCGTGTTCGGCCGGGGGGGCGGCGATGGCGGCGGTAATGGCGGCGG TAATGGCGGCGGCCCCGGCGCGCGCGCCGCGTGCGCGCCCGAGCCGCTCGATCCGGACCGCAAGCACGGCACGGTCGGCG CGGTCGCGCGCGATCTGCACGGCCACCTCGCGGCGGCCACGTCGACGGGCGGGATCACGAACAAGCAGCCGGGGCGCGTC GGCGATACGCCGATCATCGGCGCGGGCTGCTATGCGAACGACGCGACGTGCGCGGTATCGGCGACAGGCACGGGCGAGAT GTTCATCCGCCTCGCGACCGCGTACGACGTGTCCGCGCAGATCGAATACCGCGGCGCGTCGCTTGCCGGCGCCGCGTACG ACGTCGTGATGAACAAGCTGCCGAGCATCGCCGGCCGCGGCGGCATCATCGCGGTCGACGCGCGCGGCAACCTCGCGATG CCGTTCAACACCGAAGGGATGTACCGCGGCTACGCGCGCGTCGGCGAGGCGCCCGTGACCGCGATCTATCGCGAGGACGC GGCGTGA
Upstream 100 bases:
>100_bases CGGCCGCCGAAGTGACCGAATTCATGCTGCCGTGGCTCGAGGCGCGGGGCGCATGCGCCGCGCCGCCGCGCCCGCCGCGC CGTTCCAGGAAAACCGACCG
Downstream 100 bases:
>100_bases CGCCGCGAACGAGCGCAGACAGCACCGACAGGAGAAACCGATGAGCGCGAGCCGAGCCGCTCCGAGCCTGCCCGACGCGC GCGTGCTCGCGGTCGACGGG
Product: asparaginase family protein
Products: NA
Alternate protein names: Beta-aspartyl-peptidase; EcAIII; Isoaspartyl dipeptidase [H]
Number of amino acids: Translated: 348; Mature: 347
Protein sequence:
>348_residues MTSPAIVAIHGGAGTILREAMTADAEAQYRAELAAILAAAQKVLAEGGSALDAVSVAVRMLEDCPLFNAGRGAVYTADGT HELDAAIMDGATLAAGAICCATRVRNPVLAARRVLEASEHVMFAGAGADAFAAAQGLELAPPGYFDTEPRRAQWLKARRA AGTMLDHDAAAFVFGRGGGDGGGNGGGNGGGPGARAACAPEPLDPDRKHGTVGAVARDLHGHLAAATSTGGITNKQPGRV GDTPIIGAGCYANDATCAVSATGTGEMFIRLATAYDVSAQIEYRGASLAGAAYDVVMNKLPSIAGRGGIIAVDARGNLAM PFNTEGMYRGYARVGEAPVTAIYREDAA
Sequences:
>Translated_348_residues MTSPAIVAIHGGAGTILREAMTADAEAQYRAELAAILAAAQKVLAEGGSALDAVSVAVRMLEDCPLFNAGRGAVYTADGT HELDAAIMDGATLAAGAICCATRVRNPVLAARRVLEASEHVMFAGAGADAFAAAQGLELAPPGYFDTEPRRAQWLKARRA AGTMLDHDAAAFVFGRGGGDGGGNGGGNGGGPGARAACAPEPLDPDRKHGTVGAVARDLHGHLAAATSTGGITNKQPGRV GDTPIIGAGCYANDATCAVSATGTGEMFIRLATAYDVSAQIEYRGASLAGAAYDVVMNKLPSIAGRGGIIAVDARGNLAM PFNTEGMYRGYARVGEAPVTAIYREDAA >Mature_347_residues TSPAIVAIHGGAGTILREAMTADAEAQYRAELAAILAAAQKVLAEGGSALDAVSVAVRMLEDCPLFNAGRGAVYTADGTH ELDAAIMDGATLAAGAICCATRVRNPVLAARRVLEASEHVMFAGAGADAFAAAQGLELAPPGYFDTEPRRAQWLKARRAA GTMLDHDAAAFVFGRGGGDGGGNGGGNGGGPGARAACAPEPLDPDRKHGTVGAVARDLHGHLAAATSTGGITNKQPGRVG DTPIIGAGCYANDATCAVSATGTGEMFIRLATAYDVSAQIEYRGASLAGAAYDVVMNKLPSIAGRGGIIAVDARGNLAMP FNTEGMYRGYARVGEAPVTAIYREDAA
Specific function: May be involved in glutathione, and possibly other peptide, transport, although these results could also be due to polar effects of disruption [H]
COG id: COG1446
COG function: function code E; Asparaginase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Ntn-hydrolase family [H]
Homologues:
Organism=Homo sapiens, GI145275202, Length=335, Percent_Identity=34.6268656716418, Blast_Score=152, Evalue=3e-37, Organism=Homo sapiens, GI145275200, Length=335, Percent_Identity=34.6268656716418, Blast_Score=152, Evalue=3e-37, Organism=Homo sapiens, GI285002251, Length=264, Percent_Identity=34.8484848484849, Blast_Score=97, Evalue=2e-20, Organism=Escherichia coli, GI1787050, Length=341, Percent_Identity=53.9589442815249, Blast_Score=348, Evalue=2e-97, Organism=Caenorhabditis elegans, GI17569239, Length=266, Percent_Identity=24.4360902255639, Blast_Score=77, Evalue=9e-15, Organism=Drosophila melanogaster, GI18921183, Length=341, Percent_Identity=35.4838709677419, Blast_Score=153, Evalue=2e-37, Organism=Drosophila melanogaster, GI21357893, Length=290, Percent_Identity=31.3793103448276, Blast_Score=116, Evalue=2e-26, Organism=Drosophila melanogaster, GI221330102, Length=258, Percent_Identity=29.4573643410853, Blast_Score=93, Evalue=2e-19, Organism=Drosophila melanogaster, GI24652135, Length=258, Percent_Identity=29.4573643410853, Blast_Score=93, Evalue=3e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000246 [H]
Pfam domain/function: PF01112 Asparaginase_2 [H]
EC number: =3.4.19.5 [H]
Molecular weight: Translated: 35115; Mature: 34984
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSPAIVAIHGGAGTILREAMTADAEAQYRAELAAILAAAQKVLAEGGSALDAVSVAVRM CCCCEEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH LEDCPLFNAGRGAVYTADGTHELDAAIMDGATLAAGAICCATRVRNPVLAARRVLEASEH HHHCCCCCCCCCEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCC VMFAGAGADAFAAAQGLELAPPGYFDTEPRRAQWLKARRAAGTMLDHDAAAFVFGRGGGD EEEEECCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCC GGGNGGGNGGGPGARAACAPEPLDPDRKHGTVGAVARDLHGHLAAATSTGGITNKQPGRV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEEECCCCCCCCCCCCCC GDTPIIGAGCYANDATCAVSATGTGEMFIRLATAYDVSAQIEYRGASLAGAAYDVVMNKL CCCCEEECCCCCCCCEEEEEECCCCEEEEEEEEEECCEEEEEECCCCCCHHHHHHHHHHH PSIAGRGGIIAVDARGNLAMPFNTEGMYRGYARVGEAPVTAIYREDAA HHHCCCCCEEEEECCCCEECCCCCCCHHHHHHHCCCCCEEEEEECCCC >Mature Secondary Structure TSPAIVAIHGGAGTILREAMTADAEAQYRAELAAILAAAQKVLAEGGSALDAVSVAVRM CCCEEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH LEDCPLFNAGRGAVYTADGTHELDAAIMDGATLAAGAICCATRVRNPVLAARRVLEASEH HHHCCCCCCCCCEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCC VMFAGAGADAFAAAQGLELAPPGYFDTEPRRAQWLKARRAAGTMLDHDAAAFVFGRGGGD EEEEECCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCC GGGNGGGNGGGPGARAACAPEPLDPDRKHGTVGAVARDLHGHLAAATSTGGITNKQPGRV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEEECCCCCCCCCCCCCC GDTPIIGAGCYANDATCAVSATGTGEMFIRLATAYDVSAQIEYRGASLAGAAYDVVMNKL CCCCEEECCCCCCCCEEEEEECCCCEEEEEEEEEECCEEEEEECCCCCCHHHHHHHHHHH PSIAGRGGIIAVDARGNLAMPFNTEGMYRGYARVGEAPVTAIYREDAA HHHCCCCCEEEEECCCCEECCCCCCCHHHHHHHCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503; 3045084; 7984428 [H]