| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is thrB
Identifier: 126446815
GI number: 126446815
Start: 295909
End: 296904
Strand: Reverse
Name: thrB
Synonym: BMA10247_A0338
Alternate gene names: 126446815
Gene position: 296904-295909 (Counterclockwise)
Preceding gene: 126447150
Following gene: 126446133
Centisome position: 12.62
GC content: 68.98
Gene sequence:
>996_bases ATGGCCGTTTTCACCGCAGTTTCCGACGCTGACCTCGCACTCTGGATGCGCCACTACGATCTCGGCGACGTTGTCGCGTT CCGCGGCATTCCGTCCGGCATCGAGAACAGCAACTTCTTCCTGACGACGACGCGCGGCGAATACGTGCTCACGATCTTCG AGAACCTGACGGCCGGGCAATTGCCGTTCTACGTCGATCTGATGAGCCATCTCGCGAAGCACGGGGTGCCCGTGCCCGCG CCCGTCGCGCGCGACGACGGCACGCTGTTCGGCGAGTTGCACGGCAAGCCGGCCGCGATCGTCACCAAGCTCGAGGGCGC GGCGCAGCTCGCGCCGGGCGTCGAGCACTGCGTCGAAGTCGGGCAGATGCTCGCGCGCATGCACCTCGCGGGCCGCGACT ATCCGCGGCATCAGCCCAACTTGCGCAGCCTGCCGTGGTGGCGCGACACGGTGCCCGCGATCGCGCCGTTCGTCACGGGC GAGCAGCGCGCGCTGCTGGAAGGCGAGCTCGCGCACCAGGCCGCGTTCTTCGCATCGGACGATTACGCGGCGCTGCCGGA AGGCCCGTGCCATTGCGACCTGTTTCGCGACAATGCGCTCTTCGCGCACGCGGAGCCCGACACCGGCCATTCGGTGCGGC TCGGCGGCTTCTTCGATTTCTACTTCGCCGGCTGCGACAAATGGCTGTTCGACGTCGCGGTGACGGTCAACGACTGGTGC GTCGATCTGCCGACGGGCGCGCTCGACGCCGCGCGCGCCGACGCGCTGCTGCGCGCGTACCAGACGGTGCGCCCGTTCAC CGCGGGCGAGCGCCGCCGCTGGGGCGACATGCTGCGCGCGGGCGCGTACCGCTTCTGGGTATCGCGCCTGTATGATTTCC ACCTTCCCCGCGCCGCGCAGATGCTCAAGCCGCACGACCCGGGCCATTTCGAACGCATCCTGCGCGAACGCATCGCGCAC GCGGGCGCGCTCCCCGAGACCCACGCATGCAACTGA
Upstream 100 bases:
>100_bases CTATTGACGCACCGCCGGCGCCGCGCGGCGCCGGCCCCCTTCCGCCCTTTTGCGACACCGGCACGCCGCCGGCGCGCCAA CCCGAACCGACGTTTCCTGC
Downstream 100 bases:
>100_bases TCGAAGTCTCCGCCAAGACCGGCTACGTGTGGTTCCGCCAAGGCATCTGGCTGTTCCGGCGCAATCCGCTCGCATTCGTC ACACTGTTCTTCACGTACCT
Product: homoserine kinase
Products: NA
Alternate protein names: HK; HSK
Number of amino acids: Translated: 331; Mature: 330
Protein sequence:
>331_residues MAVFTAVSDADLALWMRHYDLGDVVAFRGIPSGIENSNFFLTTTRGEYVLTIFENLTAGQLPFYVDLMSHLAKHGVPVPA PVARDDGTLFGELHGKPAAIVTKLEGAAQLAPGVEHCVEVGQMLARMHLAGRDYPRHQPNLRSLPWWRDTVPAIAPFVTG EQRALLEGELAHQAAFFASDDYAALPEGPCHCDLFRDNALFAHAEPDTGHSVRLGGFFDFYFAGCDKWLFDVAVTVNDWC VDLPTGALDAARADALLRAYQTVRPFTAGERRRWGDMLRAGAYRFWVSRLYDFHLPRAAQMLKPHDPGHFERILRERIAH AGALPETHACN
Sequences:
>Translated_331_residues MAVFTAVSDADLALWMRHYDLGDVVAFRGIPSGIENSNFFLTTTRGEYVLTIFENLTAGQLPFYVDLMSHLAKHGVPVPA PVARDDGTLFGELHGKPAAIVTKLEGAAQLAPGVEHCVEVGQMLARMHLAGRDYPRHQPNLRSLPWWRDTVPAIAPFVTG EQRALLEGELAHQAAFFASDDYAALPEGPCHCDLFRDNALFAHAEPDTGHSVRLGGFFDFYFAGCDKWLFDVAVTVNDWC VDLPTGALDAARADALLRAYQTVRPFTAGERRRWGDMLRAGAYRFWVSRLYDFHLPRAAQMLKPHDPGHFERILRERIAH AGALPETHACN >Mature_330_residues AVFTAVSDADLALWMRHYDLGDVVAFRGIPSGIENSNFFLTTTRGEYVLTIFENLTAGQLPFYVDLMSHLAKHGVPVPAP VARDDGTLFGELHGKPAAIVTKLEGAAQLAPGVEHCVEVGQMLARMHLAGRDYPRHQPNLRSLPWWRDTVPAIAPFVTGE QRALLEGELAHQAAFFASDDYAALPEGPCHCDLFRDNALFAHAEPDTGHSVRLGGFFDFYFAGCDKWLFDVAVTVNDWCV DLPTGALDAARADALLRAYQTVRPFTAGERRRWGDMLRAGAYRFWVSRLYDFHLPRAAQMLKPHDPGHFERILRERIAHA GALPETHACN
Specific function: Unknown
COG id: COG2334
COG function: function code R; Putative homoserine kinase type II (protein kinase fold)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pseudomonas-type thrB family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): KHSE_BURM7 (A3MBA7)
Other databases:
- EMBL: CP000547 - RefSeq: YP_001077543.1 - ProteinModelPortal: A3MBA7 - SMR: A3MBA7 - GeneID: 4890794 - GenomeReviews: CP000547_GR - KEGG: bmn:BMA10247_A0338 - TIGR: BMA10247_A0338 - HOGENOM: HBG309377 - OMA: ADLFRDN - ProtClustDB: PRK05231 - BioCyc: BMAL320389:BMA10247_A0338-MONOMER - HAMAP: MF_00301 - InterPro: IPR002575 - InterPro: IPR005280 - InterPro: IPR011009 - TIGRFAMs: TIGR00938
Pfam domain/function: PF01636 APH; SSF56112 Kinase_like
EC number: =2.7.1.39
Molecular weight: Translated: 36779; Mature: 36648
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVFTAVSDADLALWMRHYDLGDVVAFRGIPSGIENSNFFLTTTRGEYVLTIFENLTAGQ CEEEEECCCCHHHHHHHHCCCHHHHEECCCCCCCCCCCEEEEECCCCEEEEEECCCCCCC LPFYVDLMSHLAKHGVPVPAPVARDDGTLFGELHGKPAAIVTKLEGAAQLAPGVEHCVEV CHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCEEEEEECCCHHHHCCHHHHHHHH GQMLARMHLAGRDYPRHQPNLRSLPWWRDTVPAIAPFVTGEQRALLEGELAHQAAFFASD HHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCC DYAALPEGPCHCDLFRDNALFAHAEPDTGHSVRLGGFFDFYFAGCDKWLFDVAVTVNDWC CCCCCCCCCCEEEEEECCEEEEECCCCCCCEEEECCHHHHHHHHHHHHHHHEEEEECCEE VDLPTGALDAARADALLRAYQTVRPFTAGERRRWGDMLRAGAYRFWVSRLYDFHLPRAAQ EECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH MLKPHDPGHFERILRERIAHAGALPETHACN HCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure AVFTAVSDADLALWMRHYDLGDVVAFRGIPSGIENSNFFLTTTRGEYVLTIFENLTAGQ EEEEECCCCHHHHHHHHCCCHHHHEECCCCCCCCCCCEEEEECCCCEEEEEECCCCCCC LPFYVDLMSHLAKHGVPVPAPVARDDGTLFGELHGKPAAIVTKLEGAAQLAPGVEHCVEV CHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCEEEEEECCCHHHHCCHHHHHHHH GQMLARMHLAGRDYPRHQPNLRSLPWWRDTVPAIAPFVTGEQRALLEGELAHQAAFFASD HHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCC DYAALPEGPCHCDLFRDNALFAHAEPDTGHSVRLGGFFDFYFAGCDKWLFDVAVTVNDWC CCCCCCCCCCEEEEEECCEEEEECCCCCCCEEEECCHHHHHHHHHHHHHHHEEEEECCEE VDLPTGALDAARADALLRAYQTVRPFTAGERRRWGDMLRAGAYRFWVSRLYDFHLPRAAQ EECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH MLKPHDPGHFERILRERIAHAGALPETHACN HCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA