| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is yceI [H]
Identifier: 126446804
GI number: 126446804
Start: 1396372
End: 1397808
Strand: Direct
Name: yceI [H]
Synonym: BMA10247_A1431
Alternate gene names: 126446804
Gene position: 1396372-1397808 (Clockwise)
Preceding gene: 126447598
Following gene: 126446928
Centisome position: 59.35
GC content: 70.56
Gene sequence:
>1437_bases ATGCCAGCCGCTCCCGCCGTCCCGTCGCGCGCCGCACGCGCCAGCGCCGCCGCCCGCCTCGAACGATTGCCGTTTTCCGG ATACCACAAGCTCATCTTCGTGATCATCGCGATCGCGTTCTTCTTCGATTCGGTCGACCTCGGCACGATGACTTTCGTGC TCGGCTCCATCAAGCGGGAGTTCGGCCTGTCGACGGCGACAGCCGGCCTCGTCGCGAGCGCGAGCTTCTTCGGCATGGTG CTCGGCGCGGCGGTCGCGGGGCTGCTCGCGGACCGCTTCGGCCGGCGGCCCGTCTTCCAGTGGAGCATGGTGCTATGGGG CGCGGCGTCGTACCTGTGCTCGACCGCGCAGAGCGTCGACGCGCTGATCGTCTATCGCGTGCTGCTCGGCATCGGCATGG GGATGGAATTTCCGGTCGCGCAAACGCTGCTGTCCGAGTTCGTTCCCGCCGCGAAGCGCGGCCGGCTGATCGCGCTGATG GACGGCTTCTGGCCGCTCGGCTTCATCACCGCCGGCGTCGTGTCGTACTTCGTGCTGCCGCTGTTCGGCTGGCGCACCGT GTTCGCGCTGCTCGCGCTGCCCGCCGTGTTCGTGCTCGTCGTGCGCCGGCTCGTGCCGGAATCGCCGCGCTGGCTCGAGC ATCGCGGCCGGCTCGCCGAGGCCGGGCGCGTGCTCGCGCACGTCGAGGCAAAGGTCATGAAGTCCGCGCGCGTGGCGAGC CTGCCCGCGCCGTCGCGGCTTGCCGAGCCGGCTTGCGCGCAGGGCCGCGGTGCGTTCGGCGAGATCTGGAGCGCCGCCTA CCGCCGCCGCACGACGATGGTCTGGCTGCTGTGGTTTTTCGCGCTGCTCGGTTTCTACGGGCTCACGTCGTGGCTCGGCG CGCTCCTGCAGCAAGCCGGCTTCGCCGTCACGCAATCCGTGTTCTATACGGTGCTGATCTCGCTCGGCGGCATTCCGGGC TTCCTGTGCGCGGCGTGGCTCGTCGAGCGCTGGGGCCGCAAGCCGACCTGCATCGCGTCGCTCGTCGGCGGGGGCGCGAT GGCCTACGTGTACGGCCAGAGCGCGCTGTTCGGCGGCAGCGTGACGCTGCTCGTCGGCACCGGACTCGCGATGCAGTTCT TCCTGTTCGGGATGTGGGCGGTGCTCTACACGTACACGCCGGAGCTCTACGGCACGGGCGCGCGCGCAACCGGCTCGGGT TTCGCGTCGGCGATCGGGCGGGTCGGCTCGCTGATCGGGCCGTACGCGGTCGGCATCGTGCTGCCCGTATTCGGACAAGG GGGCGTGTTCACGCTCGGCGCGCTGTCGTTCGTCGTCGCGGCACTGGCGGTGGGCGTGCTGGGAATCGAGACCCAAGGCC TGGCGCTCGAGGCGCTCGCGTCGACGCATGCCGCCGACGACGATGCGCGCGATCCCGCGGGCGCGGCGGCGAACTGA
Upstream 100 bases:
>100_bases ATGCCGCTTTCCTTCTATGGCGGCGAATAATGGTCAAGTCTACTGAGCAAGCCACGCCCCGCGCATCCCGCGCGGGGCCG CCTTCCGACCAGAGACCGCC
Downstream 100 bases:
>100_bases GCGCCGCGGCAACGCCGGCGTCGACGCCGTCGCCCGCGAATCGCCGTAGCCGATGCCGCGCCGCTGCCGATGCGGCGCCG TCAGGCCGAATCGGCCGCCT
Product: major facilitator family transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 478; Mature: 477
Protein sequence:
>478_residues MPAAPAVPSRAARASAAARLERLPFSGYHKLIFVIIAIAFFFDSVDLGTMTFVLGSIKREFGLSTATAGLVASASFFGMV LGAAVAGLLADRFGRRPVFQWSMVLWGAASYLCSTAQSVDALIVYRVLLGIGMGMEFPVAQTLLSEFVPAAKRGRLIALM DGFWPLGFITAGVVSYFVLPLFGWRTVFALLALPAVFVLVVRRLVPESPRWLEHRGRLAEAGRVLAHVEAKVMKSARVAS LPAPSRLAEPACAQGRGAFGEIWSAAYRRRTTMVWLLWFFALLGFYGLTSWLGALLQQAGFAVTQSVFYTVLISLGGIPG FLCAAWLVERWGRKPTCIASLVGGGAMAYVYGQSALFGGSVTLLVGTGLAMQFFLFGMWAVLYTYTPELYGTGARATGSG FASAIGRVGSLIGPYAVGIVLPVFGQGGVFTLGALSFVVAALAVGVLGIETQGLALEALASTHAADDDARDPAGAAAN
Sequences:
>Translated_478_residues MPAAPAVPSRAARASAAARLERLPFSGYHKLIFVIIAIAFFFDSVDLGTMTFVLGSIKREFGLSTATAGLVASASFFGMV LGAAVAGLLADRFGRRPVFQWSMVLWGAASYLCSTAQSVDALIVYRVLLGIGMGMEFPVAQTLLSEFVPAAKRGRLIALM DGFWPLGFITAGVVSYFVLPLFGWRTVFALLALPAVFVLVVRRLVPESPRWLEHRGRLAEAGRVLAHVEAKVMKSARVAS LPAPSRLAEPACAQGRGAFGEIWSAAYRRRTTMVWLLWFFALLGFYGLTSWLGALLQQAGFAVTQSVFYTVLISLGGIPG FLCAAWLVERWGRKPTCIASLVGGGAMAYVYGQSALFGGSVTLLVGTGLAMQFFLFGMWAVLYTYTPELYGTGARATGSG FASAIGRVGSLIGPYAVGIVLPVFGQGGVFTLGALSFVVAALAVGVLGIETQGLALEALASTHAADDDARDPAGAAAN >Mature_477_residues PAAPAVPSRAARASAAARLERLPFSGYHKLIFVIIAIAFFFDSVDLGTMTFVLGSIKREFGLSTATAGLVASASFFGMVL GAAVAGLLADRFGRRPVFQWSMVLWGAASYLCSTAQSVDALIVYRVLLGIGMGMEFPVAQTLLSEFVPAAKRGRLIALMD GFWPLGFITAGVVSYFVLPLFGWRTVFALLALPAVFVLVVRRLVPESPRWLEHRGRLAEAGRVLAHVEAKVMKSARVASL PAPSRLAEPACAQGRGAFGEIWSAAYRRRTTMVWLLWFFALLGFYGLTSWLGALLQQAGFAVTQSVFYTVLISLGGIPGF LCAAWLVERWGRKPTCIASLVGGGAMAYVYGQSALFGGSVTLLVGTGLAMQFFLFGMWAVLYTYTPELYGTGARATGSGF ASAIGRVGSLIGPYAVGIVLPVFGQGGVFTLGALSFVVAALAVGVLGIETQGLALEALASTHAADDDARDPAGAAAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Homo sapiens, GI24308167, Length=472, Percent_Identity=27.1186440677966, Blast_Score=134, Evalue=2e-31, Organism=Homo sapiens, GI7662270, Length=322, Percent_Identity=25.4658385093168, Blast_Score=121, Evalue=1e-27, Organism=Homo sapiens, GI213021148, Length=469, Percent_Identity=26.0127931769723, Blast_Score=119, Evalue=7e-27, Organism=Homo sapiens, GI4507005, Length=384, Percent_Identity=27.0833333333333, Blast_Score=108, Evalue=2e-23, Organism=Homo sapiens, GI216548223, Length=320, Percent_Identity=25.9375, Blast_Score=105, Evalue=8e-23, Organism=Homo sapiens, GI262399383, Length=277, Percent_Identity=25.9927797833935, Blast_Score=102, Evalue=6e-22, Organism=Homo sapiens, GI166197673, Length=379, Percent_Identity=29.287598944591, Blast_Score=101, Evalue=2e-21, Organism=Homo sapiens, GI24497490, Length=366, Percent_Identity=29.7814207650273, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI302148518, Length=374, Percent_Identity=25.668449197861, Blast_Score=95, Evalue=1e-19, Organism=Homo sapiens, GI4506999, Length=415, Percent_Identity=26.2650602409639, Blast_Score=89, Evalue=1e-17, Organism=Homo sapiens, GI33457322, Length=341, Percent_Identity=24.9266862170088, Blast_Score=88, Evalue=2e-17, Organism=Homo sapiens, GI73695465, Length=306, Percent_Identity=24.8366013071895, Blast_Score=87, Evalue=4e-17, Organism=Homo sapiens, GI24497476, Length=399, Percent_Identity=27.5689223057644, Blast_Score=85, Evalue=2e-16, Organism=Homo sapiens, GI20070188, Length=399, Percent_Identity=27.5689223057644, Blast_Score=85, Evalue=2e-16, Organism=Homo sapiens, GI203098995, Length=337, Percent_Identity=26.1127596439169, Blast_Score=82, Evalue=2e-15, Organism=Homo sapiens, GI11415038, Length=429, Percent_Identity=24.2424242424242, Blast_Score=81, Evalue=2e-15, Organism=Homo sapiens, GI31542327, Length=370, Percent_Identity=25.1351351351351, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI166064021, Length=373, Percent_Identity=25.4691689008043, Blast_Score=79, Evalue=9e-15, Organism=Homo sapiens, GI23510410, Length=300, Percent_Identity=28, Blast_Score=78, Evalue=2e-14, Organism=Homo sapiens, GI21553331, Length=307, Percent_Identity=24.4299674267101, Blast_Score=78, Evalue=2e-14, Organism=Homo sapiens, GI24497497, Length=401, Percent_Identity=27.1820448877805, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI90669191, Length=399, Percent_Identity=26.8170426065163, Blast_Score=69, Evalue=7e-12, Organism=Escherichia coli, GI1788068, Length=453, Percent_Identity=27.8145695364238, Blast_Score=156, Evalue=3e-39, Organism=Escherichia coli, GI1788074, Length=469, Percent_Identity=26.226012793177, Blast_Score=138, Evalue=7e-34, Organism=Escherichia coli, GI1786229, Length=449, Percent_Identity=24.0534521158129, Blast_Score=112, Evalue=5e-26, Organism=Escherichia coli, GI87082159, Length=411, Percent_Identity=25.5474452554745, Blast_Score=109, Evalue=3e-25, Organism=Escherichia coli, GI87081723, Length=411, Percent_Identity=28.2238442822384, Blast_Score=101, Evalue=1e-22, Organism=Escherichia coli, GI87082231, Length=181, Percent_Identity=30.3867403314917, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI87082404, Length=181, Percent_Identity=28.7292817679558, Blast_Score=92, Evalue=7e-20, Organism=Escherichia coli, GI1789207, Length=308, Percent_Identity=29.2207792207792, Blast_Score=89, Evalue=9e-19, Organism=Escherichia coli, GI1789312, Length=294, Percent_Identity=27.5510204081633, Blast_Score=88, Evalue=1e-18, Organism=Escherichia coli, GI1790463, Length=301, Percent_Identity=22.9235880398671, Blast_Score=83, Evalue=5e-17, Organism=Caenorhabditis elegans, GI32564663, Length=487, Percent_Identity=26.0780287474333, Blast_Score=150, Evalue=2e-36, Organism=Caenorhabditis elegans, GI71989531, Length=441, Percent_Identity=23.5827664399093, Blast_Score=85, Evalue=7e-17, Organism=Caenorhabditis elegans, GI71989525, Length=441, Percent_Identity=23.5827664399093, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI193202825, Length=391, Percent_Identity=25.3196930946292, Blast_Score=83, Evalue=4e-16, Organism=Caenorhabditis elegans, GI71986689, Length=391, Percent_Identity=25.3196930946292, Blast_Score=83, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17565978, Length=275, Percent_Identity=24, Blast_Score=81, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17542342, Length=436, Percent_Identity=24.5412844036697, Blast_Score=78, Evalue=9e-15, Organism=Caenorhabditis elegans, GI17565976, Length=266, Percent_Identity=26.3157894736842, Blast_Score=75, Evalue=6e-14, Organism=Caenorhabditis elegans, GI71991859, Length=422, Percent_Identity=24.4075829383886, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI71991854, Length=422, Percent_Identity=24.4075829383886, Blast_Score=73, Evalue=4e-13, Organism=Caenorhabditis elegans, GI32565921, Length=354, Percent_Identity=24.2937853107345, Blast_Score=72, Evalue=6e-13, Organism=Caenorhabditis elegans, GI71996338, Length=436, Percent_Identity=25.2293577981651, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71988651, Length=279, Percent_Identity=27.2401433691756, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI133900837, Length=346, Percent_Identity=23.4104046242775, Blast_Score=69, Evalue=4e-12, Organism=Caenorhabditis elegans, GI72003720, Length=347, Percent_Identity=23.342939481268, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17554160, Length=421, Percent_Identity=22.0902612826603, Blast_Score=66, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6320595, Length=242, Percent_Identity=30.5785123966942, Blast_Score=80, Evalue=5e-16, Organism=Saccharomyces cerevisiae, GI6324469, Length=415, Percent_Identity=22.4096385542169, Blast_Score=70, Evalue=8e-13, Organism=Saccharomyces cerevisiae, GI6320705, Length=409, Percent_Identity=22.7383863080685, Blast_Score=67, Evalue=5e-12, Organism=Saccharomyces cerevisiae, GI6323653, Length=276, Percent_Identity=25.7246376811594, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI19922874, Length=407, Percent_Identity=27.027027027027, Blast_Score=144, Evalue=1e-34, Organism=Drosophila melanogaster, GI24640198, Length=509, Percent_Identity=24.3614931237721, Blast_Score=103, Evalue=2e-22, Organism=Drosophila melanogaster, GI24640196, Length=509, Percent_Identity=24.3614931237721, Blast_Score=103, Evalue=2e-22, Organism=Drosophila melanogaster, GI24640200, Length=509, Percent_Identity=24.3614931237721, Blast_Score=103, Evalue=2e-22, Organism=Drosophila melanogaster, GI24649618, Length=378, Percent_Identity=25.3968253968254, Blast_Score=94, Evalue=2e-19, Organism=Drosophila melanogaster, GI19922616, Length=395, Percent_Identity=25.8227848101266, Blast_Score=89, Evalue=6e-18, Organism=Drosophila melanogaster, GI62484254, Length=390, Percent_Identity=25.6410256410256, Blast_Score=86, Evalue=5e-17, Organism=Drosophila melanogaster, GI24649622, Length=359, Percent_Identity=24.7910863509749, Blast_Score=80, Evalue=3e-15, Organism=Drosophila melanogaster, GI24668456, Length=373, Percent_Identity=24.3967828418231, Blast_Score=80, Evalue=4e-15, Organism=Drosophila melanogaster, GI24649616, Length=368, Percent_Identity=24.7282608695652, Blast_Score=80, Evalue=4e-15, Organism=Drosophila melanogaster, GI24647365, Length=349, Percent_Identity=25.7879656160458, Blast_Score=78, Evalue=1e-14, Organism=Drosophila melanogaster, GI161078338, Length=349, Percent_Identity=25.7879656160458, Blast_Score=78, Evalue=2e-14, Organism=Drosophila melanogaster, GI24668440, Length=375, Percent_Identity=22.1333333333333, Blast_Score=72, Evalue=6e-13, Organism=Drosophila melanogaster, GI161077756, Length=466, Percent_Identity=22.3175965665236, Blast_Score=72, Evalue=8e-13, Organism=Drosophila melanogaster, GI24584153, Length=153, Percent_Identity=33.3333333333333, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI20129657, Length=371, Percent_Identity=25.3369272237197, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI24585484, Length=371, Percent_Identity=25.3369272237197, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI45549297, Length=339, Percent_Identity=23.8938053097345, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI24583789, Length=153, Percent_Identity=32.6797385620915, Blast_Score=66, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 50469; Mature: 50338
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1 ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAAPAVPSRAARASAAARLERLPFSGYHKLIFVIIAIAFFFDSVDLGTMTFVLGSIKRE CCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH FGLSTATAGLVASASFFGMVLGAAVAGLLADRFGRRPVFQWSMVLWGAASYLCSTAQSVD HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH ALIVYRVLLGIGMGMEFPVAQTLLSEFVPAAKRGRLIALMDGFWPLGFITAGVVSYFVLP HHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHCCCEEEEECCCCHHHHHHHHHHHHHHHH LFGWRTVFALLALPAVFVLVVRRLVPESPRWLEHRGRLAEAGRVLAHVEAKVMKSARVAS HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC LPAPSRLAEPACAQGRGAFGEIWSAAYRRRTTMVWLLWFFALLGFYGLTSWLGALLQQAG CCCCHHHCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAVTQSVFYTVLISLGGIPGFLCAAWLVERWGRKPTCIASLVGGGAMAYVYGQSALFGGS HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEECCCHHCCCC VTLLVGTGLAMQFFLFGMWAVLYTYTPELYGTGARATGSGFASAIGRVGSLIGPYAVGIV EEEEHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH LPVFGQGGVFTLGALSFVVAALAVGVLGIETQGLALEALASTHAADDDARDPAGAAAN HHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure PAAPAVPSRAARASAAARLERLPFSGYHKLIFVIIAIAFFFDSVDLGTMTFVLGSIKRE CCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH FGLSTATAGLVASASFFGMVLGAAVAGLLADRFGRRPVFQWSMVLWGAASYLCSTAQSVD HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH ALIVYRVLLGIGMGMEFPVAQTLLSEFVPAAKRGRLIALMDGFWPLGFITAGVVSYFVLP HHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHCCCEEEEECCCCHHHHHHHHHHHHHHHH LFGWRTVFALLALPAVFVLVVRRLVPESPRWLEHRGRLAEAGRVLAHVEAKVMKSARVAS HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC LPAPSRLAEPACAQGRGAFGEIWSAAYRRRTTMVWLLWFFALLGFYGLTSWLGALLQQAG CCCCHHHCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAVTQSVFYTVLISLGGIPGFLCAAWLVERWGRKPTCIASLVGGGAMAYVYGQSALFGGS HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEECCCHHCCCC VTLLVGTGLAMQFFLFGMWAVLYTYTPELYGTGARATGSGFASAIGRVGSLIGPYAVGIV EEEEHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH LPVFGQGGVFTLGALSFVVAALAVGVLGIETQGLALEALASTHAADDDARDPAGAAAN HHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9274031; 9384377 [H]