Click here to switch to the map view.

The map label for this gene is cvpA [H]

Identifier: 126446763

GI number: 126446763

Start: 482213

End: 482707

Strand: Direct

Name: cvpA [H]

Synonym: BMA10247_A0535

Alternate gene names: 126446763

Gene position: 482213-482707 (Clockwise)

Preceding gene: 126445625

Following gene: 126446960

Centisome position: 20.5

GC content: 67.07

Gene sequence:

>495_bases
ATGCTGACTGCTTTCGATTACGCCGTGTTGCTGGTGATCGGTTTGTCGGCGCTGCGCGGCGCGTGGCGAGGATTCGTCGG
CGAGATTTTCGGCCTGATCGGCTGGATCGCCGCGTTTTTGATCGCGTGCCGCTTCGTCGGCGTCGTGCTGCCCTATATTC
CGGCGACTTGGCCGGGCGGCGCGCTGACCCAGTGGGTCATCGCGTTCGCGTTGATCATCATCGGCGTCGTGCTGGTCGCG
GGCGTCGCGAACGCGCTGCTGTCGCGAATCGCGCAGGCGACGGGCCTGGGCGGCGTCGATCGGTCGCTCGGCATGATGTT
CGGCCTCGTGCGCGGCGTGCTGCTCGTGTTGCTGCTCGTCGCGGCGGCGGGGCTCACCGAGCTGCCGAAACAGGAATTCT
GGCGCGACGCGTTGCTGCGTCCGTTCGCCGAACAGGGCGTGCGCGAGCTCAAGCCGCTCTTGCCCGACGGGCTCGCTGCG
TACATTCACGTCTGA

Upstream 100 bases:

>100_bases
TACGGCTACACTGTTGCGCGCGGGGCCGTTCGCCGATCGCGCGGCCGCTTCCGCCGCGATCGCGAAGGTGCGCGAAGCGG
GCCTCACGCAGTAACGGGCG

Downstream 100 bases:

>100_bases
TCCGCGCGAGCGCACCGACCGAACCGTTTTTTGTATCGTTGAAGGACATGCCATGTGCGGCATCGTAGGCGTTATCTCCC
AGTCCCCGGTCAACCAGCTC

Product: CvpA family protein

Products: NA

Alternate protein names: Protein dedE; Pur regulon 18 kDa protein [H]

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MLTAFDYAVLLVIGLSALRGAWRGFVGEIFGLIGWIAAFLIACRFVGVVLPYIPATWPGGALTQWVIAFALIIIGVVLVA
GVANALLSRIAQATGLGGVDRSLGMMFGLVRGVLLVLLLVAAAGLTELPKQEFWRDALLRPFAEQGVRELKPLLPDGLAA
YIHV

Sequences:

>Translated_164_residues
MLTAFDYAVLLVIGLSALRGAWRGFVGEIFGLIGWIAAFLIACRFVGVVLPYIPATWPGGALTQWVIAFALIIIGVVLVA
GVANALLSRIAQATGLGGVDRSLGMMFGLVRGVLLVLLLVAAAGLTELPKQEFWRDALLRPFAEQGVRELKPLLPDGLAA
YIHV
>Mature_164_residues
MLTAFDYAVLLVIGLSALRGAWRGFVGEIFGLIGWIAAFLIACRFVGVVLPYIPATWPGGALTQWVIAFALIIIGVVLVA
GVANALLSRIAQATGLGGVDRSLGMMFGLVRGVLLVLLLVAAAGLTELPKQEFWRDALLRPFAEQGVRELKPLLPDGLAA
YIHV

Specific function: Required for colicin V production from plasmid IncFI ColV3-K30 [H]

COG id: COG1286

COG function: function code R; Uncharacterized membrane protein, required for colicin V production

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788652, Length=139, Percent_Identity=34.5323741007194, Blast_Score=72, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003825 [H]

Pfam domain/function: PF02674 Colicin_V [H]

EC number: NA

Molecular weight: Translated: 17438; Mature: 17438

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTAFDYAVLLVIGLSALRGAWRGFVGEIFGLIGWIAAFLIACRFVGVVLPYIPATWPGG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
ALTQWVIAFALIIIGVVLVAGVANALLSRIAQATGLGGVDRSLGMMFGLVRGVLLVLLLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
AAAGLTELPKQEFWRDALLRPFAEQGVRELKPLLPDGLAAYIHV
HHHCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCC
>Mature Secondary Structure
MLTAFDYAVLLVIGLSALRGAWRGFVGEIFGLIGWIAAFLIACRFVGVVLPYIPATWPGG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
ALTQWVIAFALIIIGVVLVAGVANALLSRIAQATGLGGVDRSLGMMFGLVRGVLLVLLLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
AAAGLTELPKQEFWRDALLRPFAEQGVRELKPLLPDGLAAYIHV
HHHCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3040734; 2991286; 9205837; 9278503; 2542219 [H]