| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
Click here to switch to the map view.
The map label for this gene is srpH [H]
Identifier: 126446738
GI number: 126446738
Start: 39764
End: 40687
Strand: Direct
Name: srpH [H]
Synonym: BMA10247_A0051
Alternate gene names: 126446738
Gene position: 39764-40687 (Clockwise)
Preceding gene: 126446148
Following gene: 126446347
Centisome position: 1.69
GC content: 66.67
Gene sequence:
>924_bases ATGTCGAAATCCGCCCGAAACTGGGGCCTCGAACAGATCGTCGCCGAGCTGCGCGAATCGCGCGAGAAACTGCACCGCAC GCGCCATCCGCGCGGCATTCGCGAGCTGCCGTCGCGCGATGCGGTGTGCACGATCGTGTCGGGCCTGCGCGCATCGATGT TCCCGACGCATTACGGCGCGCCTGATCTGACCGACGAAACCGTCGATTACTACGTCGGCCATACGCTCGAAAGCACGCTG CGCCTGCTCGCCGAGCAGATTCGCCGGGCGCTGCGGTTCCTGCCCGAGCACGCGCAGACGCCGCTTGCCGTGCTCGAAGA ACGAGCGTTCGAGATCGCGCGCGAGTTCGGCACGCAGTTGCCCCGCATTCGCGCGCTTCTCGTCAGCGACATTCAGGCCG CGTACACCGGCGATCCGGCCGCGCAACACATCACCGAAATCCTGCTTTGCTATCCGGGCGTGCTCGCCATGATGCACCAC CGGCTCGCGCACGCGCTGTATCGGCTCGGTGTGCCGCTGCTCGCGCGCTTCATCAACGAGATCGCGCATTCGGCCACGGG CATCGATATCCATCCGGGCGCGCAAATCGGCCCGAGCTTCTTCATCGACCACGGCACGGGCGTCGTGATCGGCGAGACCG CGATCATCGGCGAGCGCGTGCGCGTCTATCAGGCGGTCACGCTCGGCGCGAAGAGCTTCCCCGCCGACGGCGACGGGATG CTCGTCAAGGGCAACGCGCGGCATCCGATCGTCGAGGACGATGTGGTCATCTACGCAGGCGCGACGATTCTCGGCCGCGT GACGATCGGCAAGGGTTCGGTGATCGGCGGCAACGTGTGGCTCACGCACAGCGTGCCGCCCGGCAGCAGCGTCGCGCAGG GAAAGATCCGCGAGAGCGACAAGGACCAGGCCGAGAAGGACTGA
Upstream 100 bases:
>100_bases GGTGCGTACTCCGCTGACACGGCGAAAACACGGTAATCTTGCGGAACCGTCACTTTTACCCGGCGGCCGCCTGCGCAAGC TCGGCCGTGCGTTTTTGCCT
Downstream 100 bases:
>100_bases GCCGCCGGCGCGATTGCCGCTTGACGCGGCGCCGGCGCTCGCTCACGCTGATTGCCGGCTCGCGGCTCGCGGCTCGCGGC TCGCGGCTCGCGGCTCGCGG
Product: putative serine O-acetyltransferase
Products: NA
Alternate protein names: SAT [H]
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MSKSARNWGLEQIVAELRESREKLHRTRHPRGIRELPSRDAVCTIVSGLRASMFPTHYGAPDLTDETVDYYVGHTLESTL RLLAEQIRRALRFLPEHAQTPLAVLEERAFEIAREFGTQLPRIRALLVSDIQAAYTGDPAAQHITEILLCYPGVLAMMHH RLAHALYRLGVPLLARFINEIAHSATGIDIHPGAQIGPSFFIDHGTGVVIGETAIIGERVRVYQAVTLGAKSFPADGDGM LVKGNARHPIVEDDVVIYAGATILGRVTIGKGSVIGGNVWLTHSVPPGSSVAQGKIRESDKDQAEKD
Sequences:
>Translated_307_residues MSKSARNWGLEQIVAELRESREKLHRTRHPRGIRELPSRDAVCTIVSGLRASMFPTHYGAPDLTDETVDYYVGHTLESTL RLLAEQIRRALRFLPEHAQTPLAVLEERAFEIAREFGTQLPRIRALLVSDIQAAYTGDPAAQHITEILLCYPGVLAMMHH RLAHALYRLGVPLLARFINEIAHSATGIDIHPGAQIGPSFFIDHGTGVVIGETAIIGERVRVYQAVTLGAKSFPADGDGM LVKGNARHPIVEDDVVIYAGATILGRVTIGKGSVIGGNVWLTHSVPPGSSVAQGKIRESDKDQAEKD >Mature_306_residues SKSARNWGLEQIVAELRESREKLHRTRHPRGIRELPSRDAVCTIVSGLRASMFPTHYGAPDLTDETVDYYVGHTLESTLR LLAEQIRRALRFLPEHAQTPLAVLEERAFEIAREFGTQLPRIRALLVSDIQAAYTGDPAAQHITEILLCYPGVLAMMHHR LAHALYRLGVPLLARFINEIAHSATGIDIHPGAQIGPSFFIDHGTGVVIGETAIIGERVRVYQAVTLGAKSFPADGDGML VKGNARHPIVEDDVVIYAGATILGRVTIGKGSVIGGNVWLTHSVPPGSSVAQGKIRESDKDQAEKD
Specific function: Cysteine biosynthesis. [C]
COG id: COG1045
COG function: function code E; Serine acetyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family [H]
Homologues:
Organism=Escherichia coli, GI1790035, Length=202, Percent_Identity=35.6435643564356, Blast_Score=111, Evalue=6e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011004 [H]
Pfam domain/function: NA
EC number: =2.3.1.30 [H]
Molecular weight: Translated: 33549; Mature: 33418
Theoretical pI: Translated: 7.24; Mature: 7.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKSARNWGLEQIVAELRESREKLHRTRHPRGIRELPSRDAVCTIVSGLRASMFPTHYGA CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHCCCCCCC PDLTDETVDYYVGHTLESTLRLLAEQIRRALRFLPEHAQTPLAVLEERAFEIAREFGTQL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH PRIRALLVSDIQAAYTGDPAAQHITEILLCYPGVLAMMHHRLAHALYRLGVPLLARFINE HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH IAHSATGIDIHPGAQIGPSFFIDHGTGVVIGETAIIGERVRVYQAVTLGAKSFPADGDGM HHHHCCCCCCCCCCCCCCCEEEECCCEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCE LVKGNARHPIVEDDVVIYAGATILGRVTIGKGSVIGGNVWLTHSVPPGSSVAQGKIRESD EEECCCCCCCCCCCEEEEECCEEEEEEEECCCCEEECCEEEEECCCCCCCHHCCCCCCCC KDQAEKD CCCCCCC >Mature Secondary Structure SKSARNWGLEQIVAELRESREKLHRTRHPRGIRELPSRDAVCTIVSGLRASMFPTHYGA CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHCCCCCCC PDLTDETVDYYVGHTLESTLRLLAEQIRRALRFLPEHAQTPLAVLEERAFEIAREFGTQL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH PRIRALLVSDIQAAYTGDPAAQHITEILLCYPGVLAMMHHRLAHALYRLGVPLLARFINE HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH IAHSATGIDIHPGAQIGPSFFIDHGTGVVIGETAIIGERVRVYQAVTLGAKSFPADGDGM HHHHCCCCCCCCCCCCCCCEEEECCCEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCE LVKGNARHPIVEDDVVIYAGATILGRVTIGKGSVIGGNVWLTHSVPPGSSVAQGKIRESD EEECCCCCCCCCCCEEEEECCEEEEEEEECCCCEEECCEEEEECCCCCCCHHCCCCCCCC KDQAEKD CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7603442 [H]