| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is 126446661
Identifier: 126446661
GI number: 126446661
Start: 1670222
End: 1671835
Strand: Reverse
Name: 126446661
Synonym: BMA10247_A1742
Alternate gene names: NA
Gene position: 1671835-1670222 (Counterclockwise)
Preceding gene: 126445894
Following gene: 126446310
Centisome position: 71.06
GC content: 73.05
Gene sequence:
>1614_bases ATGAGCGCCGCCGGCATCCGCGCGTTTCCCGGCTTCGCTTTCGGCGGCGGCGACCGGGCGCTCGCGTTCGTCGGCGGCGG CCTGATTCTCGACAGCGGCGAGGCCGAGAACACGTTCGCGTTCCGTTGCCAGGATCGCTTTCTCGTCTACACGGGTTTGC TCGGCCTGCCGAGCGTGCTGCTCGTGCTCGACGACGCGCATAGCCGGCATTACGCGCGCCTGCTCGCGACGCTCGACGAG CGGCTGCAGGGCCTCGCCGCCGTGCATCGCGTCGCGGCGCCGCGCCTGCCGCCGCCCGTTGACGTGCGATGCGATCTGCG GACGCTGTCGCTCTCGGCGAGCGCCTCGTTCGATCGCGCGGCGCATGCGCTCGCGCGCGACGGCGCACGCATCGGCTTCG TCGCGAACCAGGTCGCGCCGAGCACCGCGCGCATGCTGGGCGAACTGGCGGATCTGCTGCGCGGCCGCGGCGTCGAGGTC GATTTCGATCGCGCGGCCTGCGAGCGCGTGGCCGCGCTCGCGCACGCGTGGCACAACAAGGCGCGCTTTCTCGCGTTCAT GCGCGAGGCGGCGATACGCGGCGGGCCGCCGCTCGCGCCGAGCGCCGTGCTCGCGCCCGAGGCGTTCCTGCGCATGCGCG AGTGGGCCGAGCTCGCGGCCCGCTTCGCCGCCGAATGCGATCGGCGCGCGCCTTCGAGCGGGCTCTTTCTGAAGTCGTCG CAGGATTCGAGCGGCAACGTATCGGCGATCCTGTCGAGCGCGAACTTCGCCGAGCGCGCGCCGGCGTTCGCCGCCGAGGT GCGGCGCTGGCTGCTCGCTGACGGCTTCGACGATCCGGCGCACGTGCGCGAGCTGCGAAAGGAGTGCGAACAGCCGCCGT CGATGGAGCCGGTACCGCTGAGCGACGCGACGCTCGCCGAGCTGCGGCGCCGCCAGGCGCGGCGCCGCACCGGCCTGCCG CTGATCGTGCAGCCGGCATTGCAGCCTCCCGCCGACGCGTGCGGCAGCCCGGCGAGCGTCGGCGCGAGTTTTTGCATCGA GGACGACGGCCGCCATCGCGTCGTGGCGGTGGCGGCGCAACTGTATCGCGATGCGCAGCGCCGCCGGTTTCTCGGCCTGC ATGTCGACGACGGCCTGCTCGACGACCGCCGCGTGCGCGAATGGGTCGCGCGATGCGGCGCGCTCGTCGACGCGCTCGCG GCGCGCGGCTATCGCGGGCCCGTCAATTTCGACGGCTGCATGGGCGCGGACGGGCGGTACTGGTTCGTCGGCGACTGCAA TCCGCGGCTGACGGCCGTCTATGTGCCGCTCGCCGTGCGGACCTGGCTGCGCGCGGCCGGCATCGACGTGCGCTCGGTCA GCAGTTTCGGCTACCGGGGAGAGTTCGCGACTCCGGCGATTCGCGCGTGCGTCGACACATGGTCGCGCGCGGGCCTGATC TTCAGCCGCGAGCGGCCGCGGGGTTTCGTCGTCCTGCCCAATCTCGCGTGCCGCGACGGCCACGATGTGCTCGCGATCAA CCTCGGCGTCGCGCAGGCGACGGCGGGGCTCGCGCGCATGCGCGAGCTCGTCGCGGGTGCGGTGCCCGCGCACCTCGGAG CGATCCATGTCTGA
Upstream 100 bases:
>100_bases AGCGGCGCCGCGCCCAGTCGGCGCGCCAGACGCTGCATGCGCTGCGCGCCGCGGGCGCGCTCGAGGCGGGCGAATCGGCC GCCATTGCGCTGGGCAACGC
Downstream 100 bases:
>100_bases CGGCCCGGCGCTCGGCATCCGCCCCTTGTCCGCGGCGCTCGGCGCGCGCATCGACGGGATCGACGCGCGCGCCGAGCTGG ACGCGGATACCGTGCGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 537; Mature: 536
Protein sequence:
>537_residues MSAAGIRAFPGFAFGGGDRALAFVGGGLILDSGEAENTFAFRCQDRFLVYTGLLGLPSVLLVLDDAHSRHYARLLATLDE RLQGLAAVHRVAAPRLPPPVDVRCDLRTLSLSASASFDRAAHALARDGARIGFVANQVAPSTARMLGELADLLRGRGVEV DFDRAACERVAALAHAWHNKARFLAFMREAAIRGGPPLAPSAVLAPEAFLRMREWAELAARFAAECDRRAPSSGLFLKSS QDSSGNVSAILSSANFAERAPAFAAEVRRWLLADGFDDPAHVRELRKECEQPPSMEPVPLSDATLAELRRRQARRRTGLP LIVQPALQPPADACGSPASVGASFCIEDDGRHRVVAVAAQLYRDAQRRRFLGLHVDDGLLDDRRVREWVARCGALVDALA ARGYRGPVNFDGCMGADGRYWFVGDCNPRLTAVYVPLAVRTWLRAAGIDVRSVSSFGYRGEFATPAIRACVDTWSRAGLI FSRERPRGFVVLPNLACRDGHDVLAINLGVAQATAGLARMRELVAGAVPAHLGAIHV
Sequences:
>Translated_537_residues MSAAGIRAFPGFAFGGGDRALAFVGGGLILDSGEAENTFAFRCQDRFLVYTGLLGLPSVLLVLDDAHSRHYARLLATLDE RLQGLAAVHRVAAPRLPPPVDVRCDLRTLSLSASASFDRAAHALARDGARIGFVANQVAPSTARMLGELADLLRGRGVEV DFDRAACERVAALAHAWHNKARFLAFMREAAIRGGPPLAPSAVLAPEAFLRMREWAELAARFAAECDRRAPSSGLFLKSS QDSSGNVSAILSSANFAERAPAFAAEVRRWLLADGFDDPAHVRELRKECEQPPSMEPVPLSDATLAELRRRQARRRTGLP LIVQPALQPPADACGSPASVGASFCIEDDGRHRVVAVAAQLYRDAQRRRFLGLHVDDGLLDDRRVREWVARCGALVDALA ARGYRGPVNFDGCMGADGRYWFVGDCNPRLTAVYVPLAVRTWLRAAGIDVRSVSSFGYRGEFATPAIRACVDTWSRAGLI FSRERPRGFVVLPNLACRDGHDVLAINLGVAQATAGLARMRELVAGAVPAHLGAIHV >Mature_536_residues SAAGIRAFPGFAFGGGDRALAFVGGGLILDSGEAENTFAFRCQDRFLVYTGLLGLPSVLLVLDDAHSRHYARLLATLDER LQGLAAVHRVAAPRLPPPVDVRCDLRTLSLSASASFDRAAHALARDGARIGFVANQVAPSTARMLGELADLLRGRGVEVD FDRAACERVAALAHAWHNKARFLAFMREAAIRGGPPLAPSAVLAPEAFLRMREWAELAARFAAECDRRAPSSGLFLKSSQ DSSGNVSAILSSANFAERAPAFAAEVRRWLLADGFDDPAHVRELRKECEQPPSMEPVPLSDATLAELRRRQARRRTGLPL IVQPALQPPADACGSPASVGASFCIEDDGRHRVVAVAAQLYRDAQRRRFLGLHVDDGLLDDRRVREWVARCGALVDALAA RGYRGPVNFDGCMGADGRYWFVGDCNPRLTAVYVPLAVRTWLRAAGIDVRSVSSFGYRGEFATPAIRACVDTWSRAGLIF SRERPRGFVVLPNLACRDGHDVLAINLGVAQATAGLARMRELVAGAVPAHLGAIHV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57906; Mature: 57775
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAAGIRAFPGFAFGGGDRALAFVGGGLILDSGEAENTFAFRCQDRFLVYTGLLGLPSVL CCCCCCCCCCCCEECCCCEEEEEECCCEEEECCCCCCEEEEEECCCEEEEHHHHHHHHEE LVLDDAHSRHYARLLATLDERLQGLAAVHRVAAPRLPPPVDVRCDLRTLSLSASASFDRA EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECEEEEEECCCCCHHHH AHALARDGARIGFVANQVAPSTARMLGELADLLRGRGVEVDFDRAACERVAALAHAWHNK HHHHHHCCCEEEEEHHHCCHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHH ARFLAFMREAAIRGGPPLAPSAVLAPEAFLRMREWAELAARFAAECDRRAPSSGLFLKSS HHHHHHHHHHHHCCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECC QDSSGNVSAILSSANFAERAPAFAAEVRRWLLADGFDDPAHVRELRKECEQPPSMEPVPL CCCCCCHHHHEECCCHHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCC SDATLAELRRRQARRRTGLPLIVQPALQPPADACGSPASVGASFCIEDDGRHRVVAVAAQ CCHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHCCCCHHCCCEEEECCCCCCHHHHHHHH LYRDAQRRRFLGLHVDDGLLDDRRVREWVARCGALVDALAARGYRGPVNFDGCMGADGRY HHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCE WFVGDCNPRLTAVYVPLAVRTWLRAAGIDVRSVSSFGYRGEFATPAIRACVDTWSRAGLI EEEECCCCCEEEEEHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHCCEE FSRERPRGFVVLPNLACRDGHDVLAINLGVAQATAGLARMRELVAGAVPAHLGAIHV EECCCCCCEEEECCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SAAGIRAFPGFAFGGGDRALAFVGGGLILDSGEAENTFAFRCQDRFLVYTGLLGLPSVL CCCCCCCCCCCEECCCCEEEEEECCCEEEECCCCCCEEEEEECCCEEEEHHHHHHHHEE LVLDDAHSRHYARLLATLDERLQGLAAVHRVAAPRLPPPVDVRCDLRTLSLSASASFDRA EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECEEEEEECCCCCHHHH AHALARDGARIGFVANQVAPSTARMLGELADLLRGRGVEVDFDRAACERVAALAHAWHNK HHHHHHCCCEEEEEHHHCCHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHH ARFLAFMREAAIRGGPPLAPSAVLAPEAFLRMREWAELAARFAAECDRRAPSSGLFLKSS HHHHHHHHHHHHCCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECC QDSSGNVSAILSSANFAERAPAFAAEVRRWLLADGFDDPAHVRELRKECEQPPSMEPVPL CCCCCCHHHHEECCCHHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCC SDATLAELRRRQARRRTGLPLIVQPALQPPADACGSPASVGASFCIEDDGRHRVVAVAAQ CCHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHCCCCHHCCCEEEECCCCCCHHHHHHHH LYRDAQRRRFLGLHVDDGLLDDRRVREWVARCGALVDALAARGYRGPVNFDGCMGADGRY HHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCE WFVGDCNPRLTAVYVPLAVRTWLRAAGIDVRSVSSFGYRGEFATPAIRACVDTWSRAGLI EEEECCCCCEEEEEHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHCCEE FSRERPRGFVVLPNLACRDGHDVLAINLGVAQATAGLARMRELVAGAVPAHLGAIHV EECCCCCCEEEECCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA