Definition Burkholderia mallei NCTC 10247 chromosome II, complete genome.
Accession NC_009079
Length 2,352,693

Click here to switch to the map view.

The map label for this gene is 126446569

Identifier: 126446569

GI number: 126446569

Start: 167929

End: 169545

Strand: Reverse

Name: 126446569

Synonym: BMA10247_A0197

Alternate gene names: NA

Gene position: 169545-167929 (Counterclockwise)

Preceding gene: 126445597

Following gene: 126447010

Centisome position: 7.21

GC content: 64.07

Gene sequence:

>1617_bases
GTGGCGGACATGGCGGGCGCGGCGCTCGCGCGCGATGCTCATGCCGACGCGCCGACGCGCGCGCCGAAAAAAACGGAAGG
GCCGCTCGTAGCGGCCCTTCAGATTGCTGACAAACCCTCGCCAAGTGGGGGATTTTTGTTTTTTAATGGCGTGATGCTGA
AGACGCCCATGCCCACGCAGCACGAACTCGAGATGGTGACGCTCGAGGAACTCGTGCCGAAGGACCACCTGCTGCGCCAG
ATCGATGCGGCGGTGGATTTCGAGTTCATCCGCGCGAAGGTGGCGCATCTGTATTGCGCGGACAACGGGCGGCCGGCGCT
CGATCCCGTGGTGATGTTCAAGCTGTTGTTCATCGGCTACCTGTTCGGGGTGCGCAGCGAGCGGCAACTGATGCGTGAGG
TCCAGGTCAACGTCGCCTATCGCTGGTTCGCCCGGTTCCGGCTGACCGACAAGGTGCCGGATGCGTCAACGTTCTCGCAG
AATCGCCGCCGACGCTTCACGGACACGACGGTGTATCAGGAGATCTTCGACGAGATCGTGCGGCAGGCGATCAAGCGCGG
GCTGGTCGACGGTCGGGTGCTGTACACGGACAGCACGCACCTGAAGGCGAACGCGAACAAAGGCAAGTTCGATGTGGTGA
AGCTGGAGCAGACGCCGGCCGCCTACACGGAGGCATTGAACGCGGCAGTGGATGCGGACCGGGCCGCGCATGGCAGGAAG
CCGCTGGATCGCGACGACGATGAGCCGCCGTCTAGCAAGGACACCAAGCTCAGCCGGACCGATCCGGACAGCGGCTACAT
GGTGCGGGACGACAAGCCGAAGGGGTTCTTCTATCTGGACCACCGCACGGTGGATGCCAAGCACGCGATCATCACCGATA
CGCATGTGACGCCGGCCTCGGTGCATGACAGCCAGCCGTATCTGGATCGGCTGGATCGCCAGCGCGAGCGCTTTGAGTTC
AAGGTCGAGGCGGTGGGGCTGGATGCGGGCTACTTCACGCCGGCGGTGTGCCAGGGGCTGGAGGAGCGAGGGATTGCCGG
GGTGATGGGCTATCGCACGCCGAACCACAAGCCGGGCATGTTCTACAAACGGCAGTTCAAGTACGACGCGTATCGCAACG
AATACGTGTGCCCGCAGGGGCAGGCCCTGCCGTACAGCACGACCAATCGGCTCGGCTATCGGGAATACAAATCCAATGCG
CAGATCTGCGGGCGCTGCCCGGTACGATCGCAGTGCACGAACAGTGCGATCGCGGTGAAGGTGGTAACGCGCCACGTGTG
GGAGCGCGCCAAGGAGCGGGTGGACGCGCGGCGCTTGACCGAATGGGGCCAACGCATTTACGCGCGGCGCAAGCAGACGG
TGGAGCGCAGCTTCGCCGATGCCAAGCAGCTGCATGGGCACCGTTATGCCCGTATGCGTGGGCTACGCAAGGTGGCCGAG
CAGTGCTTGCTGGCCGCGGCGGCACAGAACATCAAGAAGATTGCGATGCTGCTGGCGCGGAAGCGGAAAAAGGGGCCAGC
GGGTCCCGATTGGCGCTTCGTGCGCATGCTGCTGCGTCTGGTGAGCGGTTTGCGCTGCAGCTTCGACTACCCGCTCGCGG
CGAACCCGCAATCCTGA

Upstream 100 bases:

>100_bases
CGCGAAAGGGCGGGAAATGGTGTAACGGTGCGGGTGTAACGGTGCGGCACCGAGCGAAACGGCGCAGCGGTACCGCACGC
GGCGAGACGGCGCCACGGGC

Downstream 100 bases:

>100_bases
TCCCAGAAAGACAAAACCCCACGCTCACAAAAACGTGGGGTTCGTCAGCAGTCTGAGGGCCGCTCGTAGCGGCCCTTCTC
TTCTCCCTGATTTGCCTGCT

Product: ISBma2, transposase

Products: NA

Alternate protein names: Transposase IS4 Family Protein; ISBma2 Transposase; IS4 Family Transposase; Transposase Is4 Family Protein; Transposase IS4 Family; ISCps6 Transposase; ISPsy22 Transposase Truncated; ISPsy6 Transposase; IS5 Family Transposase N-Terminal Domain Protein; Transposase And Inactivated Derivative; ISMca1 Transposase; IS5 Family Transposase N-Terminal Domain; Transposase ; Transposase Fragment IS5 Family; IS4 Transposase; Transposase For IS; ISPpu20 Transposase; Transposase-Related Protein; Transposase Mutator Type; Phage-Associated Cell Wall Hydrolase; Transposase Truncated; Transposase For Insertion Sequence NGRIS-8b; ISSag8 Transposase

Number of amino acids: Translated: 538; Mature: 537

Protein sequence:

>538_residues
MADMAGAALARDAHADAPTRAPKKTEGPLVAALQIADKPSPSGGFLFFNGVMLKTPMPTQHELEMVTLEELVPKDHLLRQ
IDAAVDFEFIRAKVAHLYCADNGRPALDPVVMFKLLFIGYLFGVRSERQLMREVQVNVAYRWFARFRLTDKVPDASTFSQ
NRRRRFTDTTVYQEIFDEIVRQAIKRGLVDGRVLYTDSTHLKANANKGKFDVVKLEQTPAAYTEALNAAVDADRAAHGRK
PLDRDDDEPPSSKDTKLSRTDPDSGYMVRDDKPKGFFYLDHRTVDAKHAIITDTHVTPASVHDSQPYLDRLDRQRERFEF
KVEAVGLDAGYFTPAVCQGLEERGIAGVMGYRTPNHKPGMFYKRQFKYDAYRNEYVCPQGQALPYSTTNRLGYREYKSNA
QICGRCPVRSQCTNSAIAVKVVTRHVWERAKERVDARRLTEWGQRIYARRKQTVERSFADAKQLHGHRYARMRGLRKVAE
QCLLAAAAQNIKKIAMLLARKRKKGPAGPDWRFVRMLLRLVSGLRCSFDYPLAANPQS

Sequences:

>Translated_538_residues
MADMAGAALARDAHADAPTRAPKKTEGPLVAALQIADKPSPSGGFLFFNGVMLKTPMPTQHELEMVTLEELVPKDHLLRQ
IDAAVDFEFIRAKVAHLYCADNGRPALDPVVMFKLLFIGYLFGVRSERQLMREVQVNVAYRWFARFRLTDKVPDASTFSQ
NRRRRFTDTTVYQEIFDEIVRQAIKRGLVDGRVLYTDSTHLKANANKGKFDVVKLEQTPAAYTEALNAAVDADRAAHGRK
PLDRDDDEPPSSKDTKLSRTDPDSGYMVRDDKPKGFFYLDHRTVDAKHAIITDTHVTPASVHDSQPYLDRLDRQRERFEF
KVEAVGLDAGYFTPAVCQGLEERGIAGVMGYRTPNHKPGMFYKRQFKYDAYRNEYVCPQGQALPYSTTNRLGYREYKSNA
QICGRCPVRSQCTNSAIAVKVVTRHVWERAKERVDARRLTEWGQRIYARRKQTVERSFADAKQLHGHRYARMRGLRKVAE
QCLLAAAAQNIKKIAMLLARKRKKGPAGPDWRFVRMLLRLVSGLRCSFDYPLAANPQS
>Mature_537_residues
ADMAGAALARDAHADAPTRAPKKTEGPLVAALQIADKPSPSGGFLFFNGVMLKTPMPTQHELEMVTLEELVPKDHLLRQI
DAAVDFEFIRAKVAHLYCADNGRPALDPVVMFKLLFIGYLFGVRSERQLMREVQVNVAYRWFARFRLTDKVPDASTFSQN
RRRRFTDTTVYQEIFDEIVRQAIKRGLVDGRVLYTDSTHLKANANKGKFDVVKLEQTPAAYTEALNAAVDADRAAHGRKP
LDRDDDEPPSSKDTKLSRTDPDSGYMVRDDKPKGFFYLDHRTVDAKHAIITDTHVTPASVHDSQPYLDRLDRQRERFEFK
VEAVGLDAGYFTPAVCQGLEERGIAGVMGYRTPNHKPGMFYKRQFKYDAYRNEYVCPQGQALPYSTTNRLGYREYKSNAQ
ICGRCPVRSQCTNSAIAVKVVTRHVWERAKERVDARRLTEWGQRIYARRKQTVERSFADAKQLHGHRYARMRGLRKVAEQ
CLLAAAAQNIKKIAMLLARKRKKGPAGPDWRFVRMLLRLVSGLRCSFDYPLAANPQS

Specific function: Unknown

COG id: COG3666

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61177; Mature: 61045

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADMAGAALARDAHADAPTRAPKKTEGPLVAALQIADKPSPSGGFLFFNGVMLKTPMPTQ
CCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEECCEEEECCCCCC
HELEMVTLEELVPKDHLLRQIDAAVDFEFIRAKVAHLYCADNGRPALDPVVMFKLLFIGY
HHHHEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHH
LFGVRSERQLMREVQVNVAYRWFARFRLTDKVPDASTFSQNRRRRFTDTTVYQEIFDEIV
HHCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHH
RQAIKRGLVDGRVLYTDSTHLKANANKGKFDVVKLEQTPAAYTEALNAAVDADRAAHGRK
HHHHHCCCCCCEEEEECCCEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCC
PLDRDDDEPPSSKDTKLSRTDPDSGYMVRDDKPKGFFYLDHRTVDAKHAIITDTHVTPAS
CCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEECEEECCCCEEEECCCCCCCC
VHDSQPYLDRLDRQRERFEFKVEAVGLDAGYFTPAVCQGLEERGIAGVMGYRTPNHKPGM
CCCCCHHHHHHHHHHHHHEEEEEEEECCCCCCCHHHHCCHHHCCCEEEECCCCCCCCCCC
FYKRQFKYDAYRNEYVCPQGQALPYSTTNRLGYREYKSNAQICGRCPVRSQCTNSAIAVK
CCHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCEECCCCCCHHHCCCHHHHH
VVTRHVWERAKERVDARRLTEWGQRIYARRKQTVERSFADAKQLHGHRYARMRGLRKVAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QCLLAAAAQNIKKIAMLLARKRKKGPAGPDWRFVRMLLRLVSGLRCSFDYPLAANPQS
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEECCCCCCCCCCCC
>Mature Secondary Structure 
ADMAGAALARDAHADAPTRAPKKTEGPLVAALQIADKPSPSGGFLFFNGVMLKTPMPTQ
CCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEECCEEEECCCCCC
HELEMVTLEELVPKDHLLRQIDAAVDFEFIRAKVAHLYCADNGRPALDPVVMFKLLFIGY
HHHHEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHH
LFGVRSERQLMREVQVNVAYRWFARFRLTDKVPDASTFSQNRRRRFTDTTVYQEIFDEIV
HHCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHH
RQAIKRGLVDGRVLYTDSTHLKANANKGKFDVVKLEQTPAAYTEALNAAVDADRAAHGRK
HHHHHCCCCCCEEEEECCCEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCC
PLDRDDDEPPSSKDTKLSRTDPDSGYMVRDDKPKGFFYLDHRTVDAKHAIITDTHVTPAS
CCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEECEEECCCCEEEECCCCCCCC
VHDSQPYLDRLDRQRERFEFKVEAVGLDAGYFTPAVCQGLEERGIAGVMGYRTPNHKPGM
CCCCCHHHHHHHHHHHHHEEEEEEEECCCCCCCHHHHCCHHHCCCEEEECCCCCCCCCCC
FYKRQFKYDAYRNEYVCPQGQALPYSTTNRLGYREYKSNAQICGRCPVRSQCTNSAIAVK
CCHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCEECCCCCCHHHCCCHHHHH
VVTRHVWERAKERVDARRLTEWGQRIYARRKQTVERSFADAKQLHGHRYARMRGLRKVAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QCLLAAAAQNIKKIAMLLARKRKKGPAGPDWRFVRMLLRLVSGLRCSFDYPLAANPQS
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA