| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is 126446569
Identifier: 126446569
GI number: 126446569
Start: 167929
End: 169545
Strand: Reverse
Name: 126446569
Synonym: BMA10247_A0197
Alternate gene names: NA
Gene position: 169545-167929 (Counterclockwise)
Preceding gene: 126445597
Following gene: 126447010
Centisome position: 7.21
GC content: 64.07
Gene sequence:
>1617_bases GTGGCGGACATGGCGGGCGCGGCGCTCGCGCGCGATGCTCATGCCGACGCGCCGACGCGCGCGCCGAAAAAAACGGAAGG GCCGCTCGTAGCGGCCCTTCAGATTGCTGACAAACCCTCGCCAAGTGGGGGATTTTTGTTTTTTAATGGCGTGATGCTGA AGACGCCCATGCCCACGCAGCACGAACTCGAGATGGTGACGCTCGAGGAACTCGTGCCGAAGGACCACCTGCTGCGCCAG ATCGATGCGGCGGTGGATTTCGAGTTCATCCGCGCGAAGGTGGCGCATCTGTATTGCGCGGACAACGGGCGGCCGGCGCT CGATCCCGTGGTGATGTTCAAGCTGTTGTTCATCGGCTACCTGTTCGGGGTGCGCAGCGAGCGGCAACTGATGCGTGAGG TCCAGGTCAACGTCGCCTATCGCTGGTTCGCCCGGTTCCGGCTGACCGACAAGGTGCCGGATGCGTCAACGTTCTCGCAG AATCGCCGCCGACGCTTCACGGACACGACGGTGTATCAGGAGATCTTCGACGAGATCGTGCGGCAGGCGATCAAGCGCGG GCTGGTCGACGGTCGGGTGCTGTACACGGACAGCACGCACCTGAAGGCGAACGCGAACAAAGGCAAGTTCGATGTGGTGA AGCTGGAGCAGACGCCGGCCGCCTACACGGAGGCATTGAACGCGGCAGTGGATGCGGACCGGGCCGCGCATGGCAGGAAG CCGCTGGATCGCGACGACGATGAGCCGCCGTCTAGCAAGGACACCAAGCTCAGCCGGACCGATCCGGACAGCGGCTACAT GGTGCGGGACGACAAGCCGAAGGGGTTCTTCTATCTGGACCACCGCACGGTGGATGCCAAGCACGCGATCATCACCGATA CGCATGTGACGCCGGCCTCGGTGCATGACAGCCAGCCGTATCTGGATCGGCTGGATCGCCAGCGCGAGCGCTTTGAGTTC AAGGTCGAGGCGGTGGGGCTGGATGCGGGCTACTTCACGCCGGCGGTGTGCCAGGGGCTGGAGGAGCGAGGGATTGCCGG GGTGATGGGCTATCGCACGCCGAACCACAAGCCGGGCATGTTCTACAAACGGCAGTTCAAGTACGACGCGTATCGCAACG AATACGTGTGCCCGCAGGGGCAGGCCCTGCCGTACAGCACGACCAATCGGCTCGGCTATCGGGAATACAAATCCAATGCG CAGATCTGCGGGCGCTGCCCGGTACGATCGCAGTGCACGAACAGTGCGATCGCGGTGAAGGTGGTAACGCGCCACGTGTG GGAGCGCGCCAAGGAGCGGGTGGACGCGCGGCGCTTGACCGAATGGGGCCAACGCATTTACGCGCGGCGCAAGCAGACGG TGGAGCGCAGCTTCGCCGATGCCAAGCAGCTGCATGGGCACCGTTATGCCCGTATGCGTGGGCTACGCAAGGTGGCCGAG CAGTGCTTGCTGGCCGCGGCGGCACAGAACATCAAGAAGATTGCGATGCTGCTGGCGCGGAAGCGGAAAAAGGGGCCAGC GGGTCCCGATTGGCGCTTCGTGCGCATGCTGCTGCGTCTGGTGAGCGGTTTGCGCTGCAGCTTCGACTACCCGCTCGCGG CGAACCCGCAATCCTGA
Upstream 100 bases:
>100_bases CGCGAAAGGGCGGGAAATGGTGTAACGGTGCGGGTGTAACGGTGCGGCACCGAGCGAAACGGCGCAGCGGTACCGCACGC GGCGAGACGGCGCCACGGGC
Downstream 100 bases:
>100_bases TCCCAGAAAGACAAAACCCCACGCTCACAAAAACGTGGGGTTCGTCAGCAGTCTGAGGGCCGCTCGTAGCGGCCCTTCTC TTCTCCCTGATTTGCCTGCT
Product: ISBma2, transposase
Products: NA
Alternate protein names: Transposase IS4 Family Protein; ISBma2 Transposase; IS4 Family Transposase; Transposase Is4 Family Protein; Transposase IS4 Family; ISCps6 Transposase; ISPsy22 Transposase Truncated; ISPsy6 Transposase; IS5 Family Transposase N-Terminal Domain Protein; Transposase And Inactivated Derivative; ISMca1 Transposase; IS5 Family Transposase N-Terminal Domain; Transposase ; Transposase Fragment IS5 Family; IS4 Transposase; Transposase For IS; ISPpu20 Transposase; Transposase-Related Protein; Transposase Mutator Type; Phage-Associated Cell Wall Hydrolase; Transposase Truncated; Transposase For Insertion Sequence NGRIS-8b; ISSag8 Transposase
Number of amino acids: Translated: 538; Mature: 537
Protein sequence:
>538_residues MADMAGAALARDAHADAPTRAPKKTEGPLVAALQIADKPSPSGGFLFFNGVMLKTPMPTQHELEMVTLEELVPKDHLLRQ IDAAVDFEFIRAKVAHLYCADNGRPALDPVVMFKLLFIGYLFGVRSERQLMREVQVNVAYRWFARFRLTDKVPDASTFSQ NRRRRFTDTTVYQEIFDEIVRQAIKRGLVDGRVLYTDSTHLKANANKGKFDVVKLEQTPAAYTEALNAAVDADRAAHGRK PLDRDDDEPPSSKDTKLSRTDPDSGYMVRDDKPKGFFYLDHRTVDAKHAIITDTHVTPASVHDSQPYLDRLDRQRERFEF KVEAVGLDAGYFTPAVCQGLEERGIAGVMGYRTPNHKPGMFYKRQFKYDAYRNEYVCPQGQALPYSTTNRLGYREYKSNA QICGRCPVRSQCTNSAIAVKVVTRHVWERAKERVDARRLTEWGQRIYARRKQTVERSFADAKQLHGHRYARMRGLRKVAE QCLLAAAAQNIKKIAMLLARKRKKGPAGPDWRFVRMLLRLVSGLRCSFDYPLAANPQS
Sequences:
>Translated_538_residues MADMAGAALARDAHADAPTRAPKKTEGPLVAALQIADKPSPSGGFLFFNGVMLKTPMPTQHELEMVTLEELVPKDHLLRQ IDAAVDFEFIRAKVAHLYCADNGRPALDPVVMFKLLFIGYLFGVRSERQLMREVQVNVAYRWFARFRLTDKVPDASTFSQ NRRRRFTDTTVYQEIFDEIVRQAIKRGLVDGRVLYTDSTHLKANANKGKFDVVKLEQTPAAYTEALNAAVDADRAAHGRK PLDRDDDEPPSSKDTKLSRTDPDSGYMVRDDKPKGFFYLDHRTVDAKHAIITDTHVTPASVHDSQPYLDRLDRQRERFEF KVEAVGLDAGYFTPAVCQGLEERGIAGVMGYRTPNHKPGMFYKRQFKYDAYRNEYVCPQGQALPYSTTNRLGYREYKSNA QICGRCPVRSQCTNSAIAVKVVTRHVWERAKERVDARRLTEWGQRIYARRKQTVERSFADAKQLHGHRYARMRGLRKVAE QCLLAAAAQNIKKIAMLLARKRKKGPAGPDWRFVRMLLRLVSGLRCSFDYPLAANPQS >Mature_537_residues ADMAGAALARDAHADAPTRAPKKTEGPLVAALQIADKPSPSGGFLFFNGVMLKTPMPTQHELEMVTLEELVPKDHLLRQI DAAVDFEFIRAKVAHLYCADNGRPALDPVVMFKLLFIGYLFGVRSERQLMREVQVNVAYRWFARFRLTDKVPDASTFSQN RRRRFTDTTVYQEIFDEIVRQAIKRGLVDGRVLYTDSTHLKANANKGKFDVVKLEQTPAAYTEALNAAVDADRAAHGRKP LDRDDDEPPSSKDTKLSRTDPDSGYMVRDDKPKGFFYLDHRTVDAKHAIITDTHVTPASVHDSQPYLDRLDRQRERFEFK VEAVGLDAGYFTPAVCQGLEERGIAGVMGYRTPNHKPGMFYKRQFKYDAYRNEYVCPQGQALPYSTTNRLGYREYKSNAQ ICGRCPVRSQCTNSAIAVKVVTRHVWERAKERVDARRLTEWGQRIYARRKQTVERSFADAKQLHGHRYARMRGLRKVAEQ CLLAAAAQNIKKIAMLLARKRKKGPAGPDWRFVRMLLRLVSGLRCSFDYPLAANPQS
Specific function: Unknown
COG id: COG3666
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61177; Mature: 61045
Theoretical pI: Translated: 10.09; Mature: 10.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADMAGAALARDAHADAPTRAPKKTEGPLVAALQIADKPSPSGGFLFFNGVMLKTPMPTQ CCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEECCEEEECCCCCC HELEMVTLEELVPKDHLLRQIDAAVDFEFIRAKVAHLYCADNGRPALDPVVMFKLLFIGY HHHHEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHH LFGVRSERQLMREVQVNVAYRWFARFRLTDKVPDASTFSQNRRRRFTDTTVYQEIFDEIV HHCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHH RQAIKRGLVDGRVLYTDSTHLKANANKGKFDVVKLEQTPAAYTEALNAAVDADRAAHGRK HHHHHCCCCCCEEEEECCCEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCC PLDRDDDEPPSSKDTKLSRTDPDSGYMVRDDKPKGFFYLDHRTVDAKHAIITDTHVTPAS CCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEECEEECCCCEEEECCCCCCCC VHDSQPYLDRLDRQRERFEFKVEAVGLDAGYFTPAVCQGLEERGIAGVMGYRTPNHKPGM CCCCCHHHHHHHHHHHHHEEEEEEEECCCCCCCHHHHCCHHHCCCEEEECCCCCCCCCCC FYKRQFKYDAYRNEYVCPQGQALPYSTTNRLGYREYKSNAQICGRCPVRSQCTNSAIAVK CCHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCEECCCCCCHHHCCCHHHHH VVTRHVWERAKERVDARRLTEWGQRIYARRKQTVERSFADAKQLHGHRYARMRGLRKVAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QCLLAAAAQNIKKIAMLLARKRKKGPAGPDWRFVRMLLRLVSGLRCSFDYPLAANPQS HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEECCCCCCCCCCCC >Mature Secondary Structure ADMAGAALARDAHADAPTRAPKKTEGPLVAALQIADKPSPSGGFLFFNGVMLKTPMPTQ CCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEECCEEEECCCCCC HELEMVTLEELVPKDHLLRQIDAAVDFEFIRAKVAHLYCADNGRPALDPVVMFKLLFIGY HHHHEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHH LFGVRSERQLMREVQVNVAYRWFARFRLTDKVPDASTFSQNRRRRFTDTTVYQEIFDEIV HHCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHH RQAIKRGLVDGRVLYTDSTHLKANANKGKFDVVKLEQTPAAYTEALNAAVDADRAAHGRK HHHHHCCCCCCEEEEECCCEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCC PLDRDDDEPPSSKDTKLSRTDPDSGYMVRDDKPKGFFYLDHRTVDAKHAIITDTHVTPAS CCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEECEEECCCCEEEECCCCCCCC VHDSQPYLDRLDRQRERFEFKVEAVGLDAGYFTPAVCQGLEERGIAGVMGYRTPNHKPGM CCCCCHHHHHHHHHHHHHEEEEEEEECCCCCCCHHHHCCHHHCCCEEEECCCCCCCCCCC FYKRQFKYDAYRNEYVCPQGQALPYSTTNRLGYREYKSNAQICGRCPVRSQCTNSAIAVK CCHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCEECCCCCCHHHCCCHHHHH VVTRHVWERAKERVDARRLTEWGQRIYARRKQTVERSFADAKQLHGHRYARMRGLRKVAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QCLLAAAAQNIKKIAMLLARKRKKGPAGPDWRFVRMLLRLVSGLRCSFDYPLAANPQS HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA