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The map label for this gene is ftrA [H]

Identifier: 126446531

GI number: 126446531

Start: 1508947

End: 1509903

Strand: Reverse

Name: ftrA [H]

Synonym: BMA10247_A1565

Alternate gene names: 126446531

Gene position: 1509903-1508947 (Counterclockwise)

Preceding gene: 126446099

Following gene: 126445981

Centisome position: 64.18

GC content: 72.31

Gene sequence:

>957_bases
ATGCACCCTCATCTCGTCGTCGCGCTCGCCTACGATCGCCTCTGCACTTTCGAATTCGGCTGCGTCGTCGAACTGTTCGC
GCTGCCGCGGCCGGAGCTCGGCGTCGACTGGTATCGCTTCGCGGTCTGCGCGAGCGAGCCGGGGCCGGTGCGCGCGGCGG
GCGGCATCAAGGTGCAGGCGCCGTATCGGCTCGCGCTGATGGATCGCGCGGACACGATCGTGATTCCCGGCTGGCGCGAT
CCGGACGAAACGCCGCCCGAGCCGCTGCTCAAGAAGCTCCGCGCGGCGCACCGGCGCGGCGCGCGACTCTGCTCGATCTG
CTCGGGCGTGTTCGTGCTGGCCGCGGCGGGCGTGCTCGACGGCGCGACCGTCACCACGCACTGGCGCTACGCCGAGCGCC
TGCAGGCGCGCTATCCGGCGCTGCGCGTGAATCCCGATGCGCTCTATGTCGACGCGGGGCAGATCGTCACGTCGGCGGGT
TCGGCGGCGGGCCTCGACATGCTGATGCATCTCGTGCGCCGCGATCACGGCAGCGCGATCGCGAATCGCGTCGCGCAACG
GCTCGTGCTGCCGCCGCATCGCGACGGCGGCCAGGCGCAGTTCGTGCCGCGGCCGCTGCCGAGCGTCGGCGGCGACCGGC
TCGCGAAGCTGATCGACTGGATGCGCGCACACGCGGGGCAGCCGCATACGCTCGCGTCGCTCGCCGCGCGCGCGGCGATG
AGTCCGCGCACGCTGCAGCGGCAGTTTCGCGACGCGACCGGGCTCGGCCCGTACGAATGGCTGATCCGCGAGCGGGTCGG
GCTCGCGAAGGAGATGATCGAGCGCGATCCCGCGTTGCCCGTCGCGCGCGTTGCCGCGCTCGCGGGGTTCGGCTCGGAGG
AGTCGCTGCGCCGGCATTTCAGGCGCATCGCGGCGACGAGTCCGGCCGCGTATCGCCGCAGTTTCGATGCGGGTTGA

Upstream 100 bases:

>100_bases
TCTCCTCGGGACGGTGATGGTGGCAAACGAGCGCTCAGTATCCGCGGCGCCCGCGCCGCGCGATAGTGGCGCGATCGACA
ACTTCCGGTAACATCGCGCC

Downstream 100 bases:

>100_bases
CTGCGGCGGGCGGGGCGATGCGCGGCGCGGTGGCGCTTGCGTGCAGGGAGGGGTGCGGAATCGATGAACGGCGCGATCCG
GCAGCGTGCGCGGCAGGCTC

Product: transcriptional activator FtrA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MHPHLVVALAYDRLCTFEFGCVVELFALPRPELGVDWYRFAVCASEPGPVRAAGGIKVQAPYRLALMDRADTIVIPGWRD
PDETPPEPLLKKLRAAHRRGARLCSICSGVFVLAAAGVLDGATVTTHWRYAERLQARYPALRVNPDALYVDAGQIVTSAG
SAAGLDMLMHLVRRDHGSAIANRVAQRLVLPPHRDGGQAQFVPRPLPSVGGDRLAKLIDWMRAHAGQPHTLASLAARAAM
SPRTLQRQFRDATGLGPYEWLIRERVGLAKEMIERDPALPVARVAALAGFGSEESLRRHFRRIAATSPAAYRRSFDAG

Sequences:

>Translated_318_residues
MHPHLVVALAYDRLCTFEFGCVVELFALPRPELGVDWYRFAVCASEPGPVRAAGGIKVQAPYRLALMDRADTIVIPGWRD
PDETPPEPLLKKLRAAHRRGARLCSICSGVFVLAAAGVLDGATVTTHWRYAERLQARYPALRVNPDALYVDAGQIVTSAG
SAAGLDMLMHLVRRDHGSAIANRVAQRLVLPPHRDGGQAQFVPRPLPSVGGDRLAKLIDWMRAHAGQPHTLASLAARAAM
SPRTLQRQFRDATGLGPYEWLIRERVGLAKEMIERDPALPVARVAALAGFGSEESLRRHFRRIAATSPAAYRRSFDAG
>Mature_318_residues
MHPHLVVALAYDRLCTFEFGCVVELFALPRPELGVDWYRFAVCASEPGPVRAAGGIKVQAPYRLALMDRADTIVIPGWRD
PDETPPEPLLKKLRAAHRRGARLCSICSGVFVLAAAGVLDGATVTTHWRYAERLQARYPALRVNPDALYVDAGQIVTSAG
SAAGLDMLMHLVRRDHGSAIANRVAQRLVLPPHRDGGQAQFVPRPLPSVGGDRLAKLIDWMRAHAGQPHTLASLAARAAM
SPRTLQRQFRDATGLGPYEWLIRERVGLAKEMIERDPALPVARVAALAGFGSEESLRRHFRRIAATSPAAYRRSFDAG

Specific function: Binds To The Right Arm Of The Replication Origin Oric Of The E.Coli Chromosome. Rob Binding May Influence The Formation Of The Nucleoprotein Structure, Required For Oric Function In The Initiation Of Replication. [C]

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 34811; Mature: 34811

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHPHLVVALAYDRLCTFEFGCVVELFALPRPELGVDWYRFAVCASEPGPVRAAGGIKVQA
CCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEECCCCCCEEECCCEEEEC
PYRLALMDRADTIVIPGWRDPDETPPEPLLKKLRAAHRRGARLCSICSGVFVLAAAGVLD
CEEEEEECCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHC
GATVTTHWRYAERLQARYPALRVNPDALYVDAGQIVTSAGSAAGLDMLMHLVRRDHGSAI
CCCHHHHHHHHHHHHHHCCEEEECCCEEEEECCHHHHCCCCHHHHHHHHHHHHHCCCHHH
ANRVAQRLVLPPHRDGGQAQFVPRPLPSVGGDRLAKLIDWMRAHAGQPHTLASLAARAAM
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC
SPRTLQRQFRDATGLGPYEWLIRERVGLAKEMIERDPALPVARVAALAGFGSEESLRRHF
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHH
RRIAATSPAAYRRSFDAG
HHHHHCCCHHHHHCCCCC
>Mature Secondary Structure
MHPHLVVALAYDRLCTFEFGCVVELFALPRPELGVDWYRFAVCASEPGPVRAAGGIKVQA
CCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEECCCCCCEEECCCEEEEC
PYRLALMDRADTIVIPGWRDPDETPPEPLLKKLRAAHRRGARLCSICSGVFVLAAAGVLD
CEEEEEECCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHC
GATVTTHWRYAERLQARYPALRVNPDALYVDAGQIVTSAGSAAGLDMLMHLVRRDHGSAI
CCCHHHHHHHHHHHHHHCCEEEECCCEEEEECCHHHHCCCCHHHHHHHHHHHHHCCCHHH
ANRVAQRLVLPPHRDGGQAQFVPRPLPSVGGDRLAKLIDWMRAHAGQPHTLASLAARAAM
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC
SPRTLQRQFRDATGLGPYEWLIRERVGLAKEMIERDPALPVARVAALAGFGSEESLRRHF
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHH
RRIAATSPAAYRRSFDAG
HHHHHCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]