Click here to switch to the map view.

The map label for this gene is yxjC [H]

Identifier: 126446502

GI number: 126446502

Start: 349764

End: 351167

Strand: Reverse

Name: yxjC [H]

Synonym: BMA10247_A0395

Alternate gene names: 126446502

Gene position: 351167-349764 (Counterclockwise)

Preceding gene: 126447336

Following gene: 126447620

Centisome position: 14.93

GC content: 67.38

Gene sequence:

>1404_bases
TTGTCATTCGTGATCGTCCTCGCCGCGCTGGCGTTCCTGATGTTCGCCGCCTACCGCGGCTACAGCGTGATCCTGTTCGC
CCCCGTCGCCGCGCTCGGCGCGGTGCTGCTGACCGATCCCGCCGCCGTCGCCCCCGTCTTCTCCGGCATCTTCATGGAAA
AGATGGTCGGCTTCGTGAAGCTCTACTTCCCGGTGTTCCTGCTCGGCGCCGTGTTCGGCAAGGTGATCGAGCTGTCCGGC
TTCTCCGAGGCGATCGTCGCCGCCGCGATCCGCTACATCGGCCGCTCGCGCGCGAACGCGGTGATCGTCGCGGTGTGCGC
GCTGCTCACCTATGGCGGCGTGTCGCTGTTCGTCGTCGTGTTCGCCGTCTATCCGTTCGCGGCCGAGCTCTATCGCCAGA
GCAACATTCCGAAGCGCCTGATGCCGGGCGCGATCGCGCTCGGCGCGTTCTCGTTCACGATGGATTCGCTGCCGGGCACG
CCGCAGATCCAGAACATCATCCCGACGACGTTCTTCAAGACCACCGCGTGGGCCGCGCCCGCGCTCGGCACGATCGGCTC
GGTGTTCATCGTCGTCGTCGGCCTGTCGTATCTCGAATGGCGCCGCCGCTCGGCGCTCGCGCGCGGCGAAGGCTACGGCA
CGTCGCTCGTGAACGAGCCGGAACGCGTCGAGACGAAATCGCTGCCCCATCCGATCCTCGCGGTGTCGCCGCTCGTGCTC
GTCGGCGTCGCGAACTTCGCGCTGACGAAACTGATTCCGGTGTGGTACGGCGGCGCGTCGTACACGGTGCCGCCCGACGT
GCTGCCGGGCGTGCATACGCCGATCACGACGCCGATCAAGACGGTCGTCGCGATCTGGTCGGTCGAGGCGGCGCTCCTGC
TCGGCATCCTGCTCGTCGTCATCACCGCGTTCAAGCGCGTGCACGAGCGTTTTGCGACGGGCACCAAGGCGGCCGTCGGC
GGCGCGCTGCTCGCCGCGATGAACACCGCGTCCGAATACGGCTTCGGCGGTGTGATCGCCGCGCTGCCGGGCTTCATCGT
CGTCGGCGACGCGCTGAAGAACATTCCGAATCCGCTCGTCAACGCGGCGGTGTCGGTCAGCTCGCTCGCGGGGATCACGG
GGTCGGCGTCGGGCGGCATGAGCATCGCGCTCGCGGCGATGTCCGATCTCTTCATCAAGGGCGCGCAGGCCGCGCAGATT
CCGATGGACGTGCTGCACCGGGTCGTCGCGATGGCGAGCGGCGGCATGGACACGCTGCCGCACAACGGCGCGGTGATCAC
GCTGCTCGCGGTGACGGGCCTCACGCATCGCGAATCGTATCGGGACATCTTCGCGGTGACCGTCATCAAGACGCTCGCGG
TGTTCTTCGTGATCGCCGTCTATTACCTGACGGGACTCGTCTGA

Upstream 100 bases:

>100_bases
GCACGCCGGATGGCACGAATCCTGCGGCAGCGCGTGGCGCAGCGTCGCGCCGTCCGCCGGCGCGCCCGAGCCCACAACAA
CCAAGATTTAGGAGACTCTC

Downstream 100 bases:

>100_bases
TCCGGCGGCGGGCGCGACACGCCCGCCCCGCGGCAGCCCCGCGCCGACGCCTGCCGCGCGCGAGGCCGCCCGCCGCGTCG
GCCCGGCTGCCCCGCGCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 467; Mature: 466

Protein sequence:

>467_residues
MSFVIVLAALAFLMFAAYRGYSVILFAPVAALGAVLLTDPAAVAPVFSGIFMEKMVGFVKLYFPVFLLGAVFGKVIELSG
FSEAIVAAAIRYIGRSRANAVIVAVCALLTYGGVSLFVVVFAVYPFAAELYRQSNIPKRLMPGAIALGAFSFTMDSLPGT
PQIQNIIPTTFFKTTAWAAPALGTIGSVFIVVVGLSYLEWRRRSALARGEGYGTSLVNEPERVETKSLPHPILAVSPLVL
VGVANFALTKLIPVWYGGASYTVPPDVLPGVHTPITTPIKTVVAIWSVEAALLLGILLVVITAFKRVHERFATGTKAAVG
GALLAAMNTASEYGFGGVIAALPGFIVVGDALKNIPNPLVNAAVSVSSLAGITGSASGGMSIALAAMSDLFIKGAQAAQI
PMDVLHRVVAMASGGMDTLPHNGAVITLLAVTGLTHRESYRDIFAVTVIKTLAVFFVIAVYYLTGLV

Sequences:

>Translated_467_residues
MSFVIVLAALAFLMFAAYRGYSVILFAPVAALGAVLLTDPAAVAPVFSGIFMEKMVGFVKLYFPVFLLGAVFGKVIELSG
FSEAIVAAAIRYIGRSRANAVIVAVCALLTYGGVSLFVVVFAVYPFAAELYRQSNIPKRLMPGAIALGAFSFTMDSLPGT
PQIQNIIPTTFFKTTAWAAPALGTIGSVFIVVVGLSYLEWRRRSALARGEGYGTSLVNEPERVETKSLPHPILAVSPLVL
VGVANFALTKLIPVWYGGASYTVPPDVLPGVHTPITTPIKTVVAIWSVEAALLLGILLVVITAFKRVHERFATGTKAAVG
GALLAAMNTASEYGFGGVIAALPGFIVVGDALKNIPNPLVNAAVSVSSLAGITGSASGGMSIALAAMSDLFIKGAQAAQI
PMDVLHRVVAMASGGMDTLPHNGAVITLLAVTGLTHRESYRDIFAVTVIKTLAVFFVIAVYYLTGLV
>Mature_466_residues
SFVIVLAALAFLMFAAYRGYSVILFAPVAALGAVLLTDPAAVAPVFSGIFMEKMVGFVKLYFPVFLLGAVFGKVIELSGF
SEAIVAAAIRYIGRSRANAVIVAVCALLTYGGVSLFVVVFAVYPFAAELYRQSNIPKRLMPGAIALGAFSFTMDSLPGTP
QIQNIIPTTFFKTTAWAAPALGTIGSVFIVVVGLSYLEWRRRSALARGEGYGTSLVNEPERVETKSLPHPILAVSPLVLV
GVANFALTKLIPVWYGGASYTVPPDVLPGVHTPITTPIKTVVAIWSVEAALLLGILLVVITAFKRVHERFATGTKAAVGG
ALLAAMNTASEYGFGGVIAALPGFIVVGDALKNIPNPLVNAAVSVSSLAGITGSASGGMSIALAAMSDLFIKGAQAAQIP
MDVLHRVVAMASGGMDTLPHNGAVITLLAVTGLTHRESYRDIFAVTVIKTLAVFFVIAVYYLTGLV

Specific function: Unknown

COG id: COG2610

COG function: function code GE; H+/gluconate symporter and related permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CitM (TC 2.A.11) transporter family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004680 [H]

Pfam domain/function: PF03600 CitMHS [H]

EC number: NA

Molecular weight: Translated: 48857; Mature: 48726

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SFVIVLAALAFLMFAAYRGYSVILFAPVAALGAVLLTDPAAVAPVFSGIFMEKMVGFVK
HHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH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CCCCEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377; 10568751 [H]