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The map label for this gene is orgB [H]

Identifier: 126446460

GI number: 126446460

Start: 677768

End: 678562

Strand: Reverse

Name: orgB [H]

Synonym: BMA10247_A0731

Alternate gene names: 126446460

Gene position: 678562-677768 (Counterclockwise)

Preceding gene: 126447233

Following gene: 126445806

Centisome position: 28.84

GC content: 73.96

Gene sequence:

>795_bases
ATGCGCTCCTCGAACCTGCGCCAGTTTCCTGACACGCTCGCGCCGCTCGGCGGCGTGCTGCTCAAGCGCGCGCCGCTGTC
GCAGGCGGCGCGCGCCGAGCGCTTGCTCGACGAAGCGAGGCGCCGCGCGCAACGGCTCGTGCGCGACGCCGAACGCGAGG
CCGACGCCTGCCGCGCGCACGCGGCGACAGCCGGCTACGAGGCCGGATTCGCGCGCGCGATCGCCGAACTCGCCGCCGGC
GTCGAGCGGATCGACGCGCAACGGGCGACGCTGCTCGAGCGCGTCGTCGACGACGTTCGCCGCTCGCTCGAACACCTGCT
CGACGATCCGGATCTGCTGCTGCGCATCGTGAACGCACTCGCGAGCCGCCGCGCCTGCGCGACCGATCGCCCGCTGCGCG
TATCGGTGCCGCCGCATGCGAAGCGGATCGCGCCGGCGATACGCGAACGCCTGAACGACGCGTATCCGTCGGCGCAGGTC
GTTGTCGCCGACACGCGAACGTTCGTCGTCGAATCGGGCGAGGACATTCTCGAGTTCGATCCGCGGGCCGTCGCGCGCGC
GCTTGGCGATGCGGCGCTCGCCGCATGCCGCGCGGCCGCCGCGACCGCCGCGACCGCCGCCGACGGCGCGCTCGCGCGGC
GCGCGGCGCTCGACGCGCCGCATCCGCTCGAACGAGGCACGGCACACGGCGCGGCGGCGATCGACGATGATCGGCCGCGC
GCCTCCCTCGACACTTCAACCGCACAGGAGCCATGCGATGACCCCGCTGCCAACCGCGACGCACACGCAGACTGA

Upstream 100 bases:

>100_bases
CCGCGCGCGCATGCGGCGCGGCTCGCCTCCGGGCTCGACGGCGCGCACGACGATGCGCGCGCGGCCTGGTCTTCCTCGCT
CTTCTCCTTCGCGGTGAATC

Downstream 100 bases:

>100_bases
CGCCGCCGATCGTTCAACGGGCCGCGAGCCCCCGAAGCCACCCGCGTCGCTCGACGAGATCATGAGGCAATGGCTGATCA
ACGACTTCAAGCAGAAGGTG

Product: HrpE/YscL family type III secretion apparatus protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MRSSNLRQFPDTLAPLGGVLLKRAPLSQAARAERLLDEARRRAQRLVRDAEREADACRAHAATAGYEAGFARAIAELAAG
VERIDAQRATLLERVVDDVRRSLEHLLDDPDLLLRIVNALASRRACATDRPLRVSVPPHAKRIAPAIRERLNDAYPSAQV
VVADTRTFVVESGEDILEFDPRAVARALGDAALAACRAAAATAATAADGALARRAALDAPHPLERGTAHGAAAIDDDRPR
ASLDTSTAQEPCDDPAANRDAHAD

Sequences:

>Translated_264_residues
MRSSNLRQFPDTLAPLGGVLLKRAPLSQAARAERLLDEARRRAQRLVRDAEREADACRAHAATAGYEAGFARAIAELAAG
VERIDAQRATLLERVVDDVRRSLEHLLDDPDLLLRIVNALASRRACATDRPLRVSVPPHAKRIAPAIRERLNDAYPSAQV
VVADTRTFVVESGEDILEFDPRAVARALGDAALAACRAAAATAATAADGALARRAALDAPHPLERGTAHGAAAIDDDRPR
ASLDTSTAQEPCDDPAANRDAHAD
>Mature_264_residues
MRSSNLRQFPDTLAPLGGVLLKRAPLSQAARAERLLDEARRRAQRLVRDAEREADACRAHAATAGYEAGFARAIAELAAG
VERIDAQRATLLERVVDDVRRSLEHLLDDPDLLLRIVNALASRRACATDRPLRVSVPPHAKRIAPAIRERLNDAYPSAQV
VVADTRTFVVESGEDILEFDPRAVARALGDAALAACRAAAATAATAADGALARRAALDAPHPLERGTAHGAAAIDDDRPR
ASLDTSTAQEPCDDPAANRDAHAD

Specific function: Oxygen-regulated protein required for bacterial internalization [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28198; Mature: 28198

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSSNLRQFPDTLAPLGGVLLKRAPLSQAARAERLLDEARRRAQRLVRDAEREADACRAH
CCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AATAGYEAGFARAIAELAAGVERIDAQRATLLERVVDDVRRSLEHLLDDPDLLLRIVNAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
ASRRACATDRPLRVSVPPHAKRIAPAIRERLNDAYPSAQVVVADTRTFVVESGEDILEFD
HHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEECCCHHHHCC
PRAVARALGDAALAACRAAAATAATAADGALARRAALDAPHPLERGTAHGAAAIDDDRPR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCC
ASLDTSTAQEPCDDPAANRDAHAD
CCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRSSNLRQFPDTLAPLGGVLLKRAPLSQAARAERLLDEARRRAQRLVRDAEREADACRAH
CCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AATAGYEAGFARAIAELAAGVERIDAQRATLLERVVDDVRRSLEHLLDDPDLLLRIVNAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
ASRRACATDRPLRVSVPPHAKRIAPAIRERLNDAYPSAQVVVADTRTFVVESGEDILEFD
HHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEECCCHHHHCC
PRAVARALGDAALAACRAAAATAATAADGALARRAALDAPHPLERGTAHGAAAIDDDRPR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCC
ASLDTSTAQEPCDDPAANRDAHAD
CCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8063389; 10816487; 11677609 [H]