| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is 126446294
Identifier: 126446294
GI number: 126446294
Start: 490145
End: 492154
Strand: Direct
Name: 126446294
Synonym: BMA10247_A0544
Alternate gene names: NA
Gene position: 490145-492154 (Clockwise)
Preceding gene: 126446816
Following gene: 126445828
Centisome position: 20.83
GC content: 70.5
Gene sequence:
>2010_bases ATGGCGGTGGCGGTGTGCGCGGCGACGGCGCTCGCGGGCGCCGCGCGAGCCGAGAACGTGCTGCCCGCGACGACGTCGTG GATCGGCAACACCTATGGCTATGGCGACGGCACGTGGACGCAGATCGACATTCGCGCGATCGCGGTCGCGCCTGACGGCA AGGTGTATACGAACGCGCCGTGGGACGAGAGCGGCGCGGAGGCGAGCGTCTATCAGGACGGCAAGATGCTCGGCTTCGCG GGCGGCACGCACGGCTGGGGCAACGCGGGCGGCAGCGCGATCGCGGTCAACAGCCGCTACGCGTACGTCGCGATCGCGGT CGGCAACGAGAAAGGCCGGCTCGTCGCGCCGGGCGTCTGGCCGGACAAGGGCCGGCAGTGGTACGGCATCTTGCGCCGCG AGATCGGCGACGTGAAGCAGGCCGCGCCGTTTCGCGGCGCGAAGGCGGGCGACGCGCGCGCGAAGCTTGCCGCGAGCTTC CTGATGGTCAACGAAGTGCCGACCGACACGCGCGCGGAAGTCGCCGGGCTCGCCGCGAGCGACAGCGTGCTGTACGCGAG CGATCCGCTGCACGACGCCGTGAACGTGTACGACACGCCGGCGCTGCCGCCGGACGCGCAGGCCGTCGACGTCGCGACCG ATGCGAAGGGCCGCGTGCTTCTCGCCGACAACGGCCCGCGCCAGCAGATCCTGATCTTCTCGAAATCGGCCGACGGCGGC TACGCGATGAGCGGCACGCTCGGCGAGCGCGGCGGCATCTTCTCGGGCGTCGCGGGCCGGCCGGGGCCGCAGCGCTTCAA CGGGCTCACGGGCGTCGGCGTCGACCGGGCGGGCAACGTGTACGTCGCGACCAACGGCATCGGCCCGCGCCACGGCACGA TCGGCGCGGGGCTCGGCAGCACGCTCGAGAGCTATGCGCCCGACGGCCGGCTGCGCTGGCAGGTGCAGGGCCTGCTGTTC GTCGACGGCGCGTGGATCGACCCGGGCCGGCCGAACAGCGTGTACACGGGCAACAAGCGCTTCGAGCTCGATCTGTCGAA GCCCGCGGGCAAGGAGTGGAAATATGCGGGATTCCTGTCGAACCGCTTCAAGTATCCGGACGACCCGGTGTTCAACACCG ATCAATGGCCGGGGATGCCGTTCGCGCGCAAGGTCGCGGGCCGCACGTTCCTCTACCTGACCGACATGCACGCCGACCAT CTGAAGATCTATCGCTTCGATCCGAAGCGCGACGGCGAGACCGCGATTCCGTCGGGGCTGCTCGCGGGGCGCGCGCGGCC CGTCGACAAGGTGCCGAACCGGCCGCCGGGCGGCGATTGGATCTGGCGCGACGCGAACGGCAACGGCCGCATCGACGAAG GCGAGTTCGAGCTCAACACGACCGGCAAGGAGATGGCGGGCGGCTGGGGCTGGTGGATCGACACGGGCGGCGATATCTGG CGCACGAGCGACACGCGCGGCATCCGGCGCTTTCGCTTCGGCGGGCTCGACAAGGCGGGCAACCCGATCTACTCGTACGA CAAGCTGACGACGTACCCAAGCCCCGCGCCGTTTACCGAGCTGCGCCGCGCGCTGTACGACGCGTCCTCGGACACGCTGT ACGTGACGGGCTACACGGCCGACGCGCCGCGCGTGGGCGGCCTGTCGAAGGAGGTGGGGCGCGTGCTCGTGCGCTTCGAC AAGTGGTCGAGCGGCGCGCCGGTCATGCGCTATCAGGTCGCGCTGCCGTGGCGGCTCGACGCGAAGCCGATCTTCACGCT GATCGGGCTGACGCAGGAGGGGCGCTACCTGTTCGGCGTCGAGCCCGTCGGCACGGTGCACGTGTACGACAAGGACAACG GCCGCGAGCTCGGCGTGATCAAGCCGGGGCCGGAGGTGGGGCGCGCGTCGGGCTGGGTGGACGTGCCGTTCGGCATCAGC GCGTACCGGCGCGAGAACGGCGAGTACCTGGTCTTCGTCGAGGAGGACGCGCGCGGCAAGGTGATGATGTATCGATGGAG GCCGCAATGA
Upstream 100 bases:
>100_bases CAAACGCACGAGCGTTTCGCGTGTCGGGCTCGCCTGCGGCCAGGCGCGCGGGCGTCTCGGCACGGTTGAAGGGAGAAGCG TTTTGCGACGTTTGATGCGA
Downstream 100 bases:
>100_bases TCGGGGCGGGAGCGGCGGCGATGGCGAACGCGGCGGGGCGGCGCGTCCATGGATAAAGGCATGCTGAAGAACGTCGCGAT CAATTTCTTCGGATTGGTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 669; Mature: 668
Protein sequence:
>669_residues MAVAVCAATALAGAARAENVLPATTSWIGNTYGYGDGTWTQIDIRAIAVAPDGKVYTNAPWDESGAEASVYQDGKMLGFA GGTHGWGNAGGSAIAVNSRYAYVAIAVGNEKGRLVAPGVWPDKGRQWYGILRREIGDVKQAAPFRGAKAGDARAKLAASF LMVNEVPTDTRAEVAGLAASDSVLYASDPLHDAVNVYDTPALPPDAQAVDVATDAKGRVLLADNGPRQQILIFSKSADGG YAMSGTLGERGGIFSGVAGRPGPQRFNGLTGVGVDRAGNVYVATNGIGPRHGTIGAGLGSTLESYAPDGRLRWQVQGLLF VDGAWIDPGRPNSVYTGNKRFELDLSKPAGKEWKYAGFLSNRFKYPDDPVFNTDQWPGMPFARKVAGRTFLYLTDMHADH LKIYRFDPKRDGETAIPSGLLAGRARPVDKVPNRPPGGDWIWRDANGNGRIDEGEFELNTTGKEMAGGWGWWIDTGGDIW RTSDTRGIRRFRFGGLDKAGNPIYSYDKLTTYPSPAPFTELRRALYDASSDTLYVTGYTADAPRVGGLSKEVGRVLVRFD KWSSGAPVMRYQVALPWRLDAKPIFTLIGLTQEGRYLFGVEPVGTVHVYDKDNGRELGVIKPGPEVGRASGWVDVPFGIS AYRRENGEYLVFVEEDARGKVMMYRWRPQ
Sequences:
>Translated_669_residues MAVAVCAATALAGAARAENVLPATTSWIGNTYGYGDGTWTQIDIRAIAVAPDGKVYTNAPWDESGAEASVYQDGKMLGFA GGTHGWGNAGGSAIAVNSRYAYVAIAVGNEKGRLVAPGVWPDKGRQWYGILRREIGDVKQAAPFRGAKAGDARAKLAASF LMVNEVPTDTRAEVAGLAASDSVLYASDPLHDAVNVYDTPALPPDAQAVDVATDAKGRVLLADNGPRQQILIFSKSADGG YAMSGTLGERGGIFSGVAGRPGPQRFNGLTGVGVDRAGNVYVATNGIGPRHGTIGAGLGSTLESYAPDGRLRWQVQGLLF VDGAWIDPGRPNSVYTGNKRFELDLSKPAGKEWKYAGFLSNRFKYPDDPVFNTDQWPGMPFARKVAGRTFLYLTDMHADH LKIYRFDPKRDGETAIPSGLLAGRARPVDKVPNRPPGGDWIWRDANGNGRIDEGEFELNTTGKEMAGGWGWWIDTGGDIW RTSDTRGIRRFRFGGLDKAGNPIYSYDKLTTYPSPAPFTELRRALYDASSDTLYVTGYTADAPRVGGLSKEVGRVLVRFD KWSSGAPVMRYQVALPWRLDAKPIFTLIGLTQEGRYLFGVEPVGTVHVYDKDNGRELGVIKPGPEVGRASGWVDVPFGIS AYRRENGEYLVFVEEDARGKVMMYRWRPQ >Mature_668_residues AVAVCAATALAGAARAENVLPATTSWIGNTYGYGDGTWTQIDIRAIAVAPDGKVYTNAPWDESGAEASVYQDGKMLGFAG GTHGWGNAGGSAIAVNSRYAYVAIAVGNEKGRLVAPGVWPDKGRQWYGILRREIGDVKQAAPFRGAKAGDARAKLAASFL MVNEVPTDTRAEVAGLAASDSVLYASDPLHDAVNVYDTPALPPDAQAVDVATDAKGRVLLADNGPRQQILIFSKSADGGY AMSGTLGERGGIFSGVAGRPGPQRFNGLTGVGVDRAGNVYVATNGIGPRHGTIGAGLGSTLESYAPDGRLRWQVQGLLFV DGAWIDPGRPNSVYTGNKRFELDLSKPAGKEWKYAGFLSNRFKYPDDPVFNTDQWPGMPFARKVAGRTFLYLTDMHADHL KIYRFDPKRDGETAIPSGLLAGRARPVDKVPNRPPGGDWIWRDANGNGRIDEGEFELNTTGKEMAGGWGWWIDTGGDIWR TSDTRGIRRFRFGGLDKAGNPIYSYDKLTTYPSPAPFTELRRALYDASSDTLYVTGYTADAPRVGGLSKEVGRVLVRFDK WSSGAPVMRYQVALPWRLDAKPIFTLIGLTQEGRYLFGVEPVGTVHVYDKDNGRELGVIKPGPEVGRASGWVDVPFGISA YRRENGEYLVFVEEDARGKVMMYRWRPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72382; Mature: 72251
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: PS00018 EF_HAND_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVAVCAATALAGAARAENVLPATTSWIGNTYGYGDGTWTQIDIRAIAVAPDGKVYTNAP CEEEEEHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCEEEEEEEEEEECCCCCEEECCC WDESGAEASVYQDGKMLGFAGGTHGWGNAGGSAIAVNSRYAYVAIAVGNEKGRLVAPGVW CCCCCCCEEEEECCCEEEECCCCCCCCCCCCCEEEEECCEEEEEEEEECCCCCEEECCCC PDKGRQWYGILRREIGDVKQAAPFRGAKAGDARAKLAASFLMVNEVPTDTRAEVAGLAAS CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHEEEEEEECCCCCCHHHHEEEECC DSVLYASDPLHDAVNVYDTPALPPDAQAVDVATDAKGRVLLADNGPRQQILIFSKSADGG CCEEEECCCCCHHHCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEEEEEEECCCCC YAMSGTLGERGGIFSGVAGRPGPQRFNGLTGVGVDRAGNVYVATNGIGPRHGTIGAGLGS EEEECCCCCCCCEEECCCCCCCHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHH TLESYAPDGRLRWQVQGLLFVDGAWIDPGRPNSVYTGNKRFELDLSKPAGKEWKYAGFLS HHHHHCCCCEEEEEEEEEEEECCEEECCCCCCCEEECCEEEEEEECCCCCCCEEEEEEHH NRFKYPDDPVFNTDQWPGMPFARKVAGRTFLYLTDMHADHLKIYRFDPKRDGETAIPSGL CCCCCCCCCCCCCCCCCCCCHHHHHCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCH LAGRARPVDKVPNRPPGGDWIWRDANGNGRIDEGEFELNTTGKEMAGGWGWWIDTGGDIW HHCCCCCHHHCCCCCCCCCEEEECCCCCCCCCCCEEEEECCCHHHCCCEEEEEECCCCEE RTSDTRGIRRFRFGGLDKAGNPIYSYDKLTTYPSPAPFTELRRALYDASSDTLYVTGYTA ECCCCCCHHEEECCCCCCCCCCCEECCCEECCCCCCCHHHHHHHHHCCCCCEEEEEEEEC DAPRVGGLSKEVGRVLVRFDKWSSGAPVMRYQVALPWRLDAKPIFTLIGLTQEGRYLFGV CCCCCCCCHHHHCEEEEEEECCCCCCCEEEEEEECCEEECCCCEEEEEEECCCCCEEEEC EPVGTVHVYDKDNGRELGVIKPGPEVGRASGWVDVPFGISAYRRENGEYLVFVEEDARGK CCCCEEEEEECCCCCEEEEECCCCCCCCCCCEEECCCCCCCEEECCCCEEEEEECCCCCC VMMYRWRPQ EEEEEECCC >Mature Secondary Structure AVAVCAATALAGAARAENVLPATTSWIGNTYGYGDGTWTQIDIRAIAVAPDGKVYTNAP EEEEEHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCEEEEEEEEEEECCCCCEEECCC WDESGAEASVYQDGKMLGFAGGTHGWGNAGGSAIAVNSRYAYVAIAVGNEKGRLVAPGVW CCCCCCCEEEEECCCEEEECCCCCCCCCCCCCEEEEECCEEEEEEEEECCCCCEEECCCC PDKGRQWYGILRREIGDVKQAAPFRGAKAGDARAKLAASFLMVNEVPTDTRAEVAGLAAS CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHEEEEEEECCCCCCHHHHEEEECC DSVLYASDPLHDAVNVYDTPALPPDAQAVDVATDAKGRVLLADNGPRQQILIFSKSADGG CCEEEECCCCCHHHCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEEEEEEECCCCC YAMSGTLGERGGIFSGVAGRPGPQRFNGLTGVGVDRAGNVYVATNGIGPRHGTIGAGLGS EEEECCCCCCCCEEECCCCCCCHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHH TLESYAPDGRLRWQVQGLLFVDGAWIDPGRPNSVYTGNKRFELDLSKPAGKEWKYAGFLS HHHHHCCCCEEEEEEEEEEEECCEEECCCCCCCEEECCEEEEEEECCCCCCCEEEEEEHH NRFKYPDDPVFNTDQWPGMPFARKVAGRTFLYLTDMHADHLKIYRFDPKRDGETAIPSGL CCCCCCCCCCCCCCCCCCCCHHHHHCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCH LAGRARPVDKVPNRPPGGDWIWRDANGNGRIDEGEFELNTTGKEMAGGWGWWIDTGGDIW HHCCCCCHHHCCCCCCCCCEEEECCCCCCCCCCCEEEEECCCHHHCCCEEEEEECCCCEE RTSDTRGIRRFRFGGLDKAGNPIYSYDKLTTYPSPAPFTELRRALYDASSDTLYVTGYTA ECCCCCCHHEEECCCCCCCCCCCEECCCEECCCCCCCHHHHHHHHHCCCCCEEEEEEEEC DAPRVGGLSKEVGRVLVRFDKWSSGAPVMRYQVALPWRLDAKPIFTLIGLTQEGRYLFGV CCCCCCCCHHHHCEEEEEEECCCCCCCEEEEEEECCEEECCCCEEEEEEECCCCCEEEEC EPVGTVHVYDKDNGRELGVIKPGPEVGRASGWVDVPFGISAYRRENGEYLVFVEEDARGK CCCCEEEEEECCCCCEEEEECCCCCCCCCCCEEECCCCCCCEEECCCCEEEEEECCCCCC VMMYRWRPQ EEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA