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The map label for this gene is yedU [C]

Identifier: 126446290

GI number: 126446290

Start: 1445005

End: 1445685

Strand: Reverse

Name: yedU [C]

Synonym: BMA10247_A1490

Alternate gene names: 126446290

Gene position: 1445685-1445005 (Counterclockwise)

Preceding gene: 126447446

Following gene: 126445655

Centisome position: 61.45

GC content: 67.11

Gene sequence:

>681_bases
ATGAAGATTCTCGTGGTTCTCACTTCGCACGACGAACTCGGCACGACCGGCAAGAAAACCGGATTCTGGCTCGAGGAACT
GGCCGCGCCGTACTACGCGCTGAAAGACGCCGGCGCCGAGCTCACGCTCGCGTCGCCGCGCGGCGGGCTGCCGCCCGTCG
ATCCGAAGAGCGACGATCCGGCTTCACAAACCGACGCGACGCGCCGTTTCGCGAAGGACGCCGAAGCACAGGCCGCGCTC
GCGTCGACGCGCAAACTCGCCGACGTGTCGATCGACGATTACGACGCGGTGTTCTATCCCGGCGGCCACGGCCCGCTGTG
GGACCTCGCCGAGGACCGTCATTCGATCGCGCTGATCGAGCGCGCGATCGCGACGAACAAGCCCGTCGCGGCCGTCTGCC
ATGCGCCCGGCGTACTGCGCAACGTGAAGGATCCGTCGGGCGCGTCGTTCGTGAAGGGCCTGAATGTCACGGGCTTCTCG
AACAGCGAGGAGGCGGCCGTCGAGCTCACCGAGGTCGTGCCGTTTCTCGTCGAGGACATGCTGAAGACGAACGGCGGCAA
TTACTCGCGCGCGGCCGACTGGGCGCCGCACGTCGTCGTCGACGGGCTGCTCGTCACAGGGCAGAACCCGGCGTCGTCGG
AGCCGGTTGCCGAGGCGCTGCTCAATCTGCTCGAGACGTAA

Upstream 100 bases:

>100_bases
TCGCGCGCGAGCGGGACGCCGGCCGCTTCGAAGACGTACGACCGGCGGGCCCGTCCGGGCCGCGCCGCCTGATTCTCAAG
ACGCCAAGGAGGGCATCCAG

Downstream 100 bases:

>100_bases
TGCGCGGCGCGGGCGGACGCGTCGCGCACCGTTCGCCGCGCTGTTGCCGAGCCCTGTTCGCGTCGAGCCGCGCCGACGTC
GGCTCGCGTTCGGCGGCCTC

Product: DJ-1/PfpI family protein

Products: NA

Alternate protein names: ThiJ/PfpI Domain-Containing Protein; ThiJ/PfpI Family Protein; ThiJ/PfpI; DJ-1/PfpI Family Protein; Intracellular Protease/Amidase; DJ-1/PfpI Family; NonF-Related Protein; DJ-1/PfpI-Family Transcriptional Regulator; Peptidase; DJ-1/PfpI Family Transcriptional Regulator; DJ-1/PfPI Family Protein; Intracellular Protease/Amidase ThiJ/PfpL Family; Exported Pfp1 Family Protein; Intracellular Protease/Amidase-Like; C56 Family Peptidase; DJ-1/PfpI/ThiJ Superfamily Protein; Transcriptional Regulator; Amidotransferase; PFPI-Like Cystiene Protease; Intracellular Protease Amidase; ThiJ/PfpI Protein; Regulatory Protein; ThiJ Protein; NonF Protein; Chaperone Protein; Thij/Pfpi Domain-Containing Protein; Transcriptional Regulator Fis Family; Intracellular Protease/Amidase ThiJ/PfpL Family Protein; Chaperone Protein HchA; Fis Family Transcriptional Regulator

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MKILVVLTSHDELGTTGKKTGFWLEELAAPYYALKDAGAELTLASPRGGLPPVDPKSDDPASQTDATRRFAKDAEAQAAL
ASTRKLADVSIDDYDAVFYPGGHGPLWDLAEDRHSIALIERAIATNKPVAAVCHAPGVLRNVKDPSGASFVKGLNVTGFS
NSEEAAVELTEVVPFLVEDMLKTNGGNYSRAADWAPHVVVDGLLVTGQNPASSEPVAEALLNLLET

Sequences:

>Translated_226_residues
MKILVVLTSHDELGTTGKKTGFWLEELAAPYYALKDAGAELTLASPRGGLPPVDPKSDDPASQTDATRRFAKDAEAQAAL
ASTRKLADVSIDDYDAVFYPGGHGPLWDLAEDRHSIALIERAIATNKPVAAVCHAPGVLRNVKDPSGASFVKGLNVTGFS
NSEEAAVELTEVVPFLVEDMLKTNGGNYSRAADWAPHVVVDGLLVTGQNPASSEPVAEALLNLLET
>Mature_226_residues
MKILVVLTSHDELGTTGKKTGFWLEELAAPYYALKDAGAELTLASPRGGLPPVDPKSDDPASQTDATRRFAKDAEAQAAL
ASTRKLADVSIDDYDAVFYPGGHGPLWDLAEDRHSIALIERAIATNKPVAAVCHAPGVLRNVKDPSGASFVKGLNVTGFS
NSEEAAVELTEVVPFLVEDMLKTNGGNYSRAADWAPHVVVDGLLVTGQNPASSEPVAEALLNLLET

Specific function: Not Known. [C]

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI310129235, Length=193, Percent_Identity=27.979274611399, Blast_Score=64, Evalue=7e-11,
Organism=Homo sapiens, GI239749942, Length=193, Percent_Identity=27.979274611399, Blast_Score=64, Evalue=7e-11,
Organism=Homo sapiens, GI32699045, Length=193, Percent_Identity=27.979274611399, Blast_Score=64, Evalue=8e-11,
Organism=Homo sapiens, GI310129233, Length=161, Percent_Identity=30.4347826086957, Blast_Score=64, Evalue=9e-11,
Organism=Saccharomyces cerevisiae, GI6320742, Length=234, Percent_Identity=30.3418803418803, Blast_Score=92, Evalue=9e-20,
Organism=Saccharomyces cerevisiae, GI6324967, Length=233, Percent_Identity=26.6094420600858, Blast_Score=69, Evalue=8e-13,
Organism=Saccharomyces cerevisiae, GI6324975, Length=233, Percent_Identity=26.6094420600858, Blast_Score=68, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6323984, Length=233, Percent_Identity=26.1802575107296, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23890; Mature: 23890

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILVVLTSHDELGTTGKKTGFWLEELAAPYYALKDAGAELTLASPRGGLPPVDPKSDDP
CEEEEEEECCCCCCCCCCCCCCHHHHHCCCHHHHHCCCCEEEEECCCCCCCCCCCCCCCC
ASQTDATRRFAKDAEAQAALASTRKLADVSIDDYDAVFYPGGHGPLWDLAEDRHSIALIE
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHH
RAIATNKPVAAVCHAPGVLRNVKDPSGASFVKGLNVTGFSNSEEAAVELTEVVPFLVEDM
HHHHCCCCEEEECCCCHHHHCCCCCCCCHHHHCCEECCCCCCHHHHHHHHHHHHHHHHHH
LKTNGGNYSRAADWAPHVVVDGLLVTGQNPASSEPVAEALLNLLET
HHCCCCCCCCCCCCCCHHEECCEEEECCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MKILVVLTSHDELGTTGKKTGFWLEELAAPYYALKDAGAELTLASPRGGLPPVDPKSDDP
CEEEEEEECCCCCCCCCCCCCCHHHHHCCCHHHHHCCCCEEEEECCCCCCCCCCCCCCCC
ASQTDATRRFAKDAEAQAALASTRKLADVSIDDYDAVFYPGGHGPLWDLAEDRHSIALIE
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHH
RAIATNKPVAAVCHAPGVLRNVKDPSGASFVKGLNVTGFSNSEEAAVELTEVVPFLVEDM
HHHHCCCCEEEECCCCHHHHCCCCCCCCHHHHCCEECCCCCCHHHHHHHHHHHHHHHHHH
LKTNGGNYSRAADWAPHVVVDGLLVTGQNPASSEPVAEALLNLLET
HHCCCCCCCCCCCCCCHHEECCEEEECCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA