| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is 126446254
Identifier: 126446254
GI number: 126446254
Start: 155507
End: 156157
Strand: Direct
Name: 126446254
Synonym: BMA10247_A0180
Alternate gene names: NA
Gene position: 155507-156157 (Clockwise)
Preceding gene: 126447613
Following gene: 126446389
Centisome position: 6.61
GC content: 69.28
Gene sequence:
>651_bases ATGAAAACGGATAGGCAGATCAAGCAGGAAGTCGAGGATGAACTGACGGGCGACCCGATGATCGACGTCGCGCATTTCGA CGTCGACGTCGCCGGGCACATCGTCACGCTGACGGGCCACCCGTCGAGCTACGCGGAAAAGCTCGCGGCCGAGAAGGCGG CGAACCGGGTCGCGGGCGTGCGGGCGGTCGTCGTCGACGTGCAGGTGCGGTTGCCGAGCGATGACGTGCGCACCGACGAG GCGATCGCCGACGCGGTGCGCTCGACCCTGCACTGGACGGTCGGGCTGCACGACGCGGCCGTGCACGTGCAAGTGGAAGC GGGCTGGGTGACGTTGTCGGGCCAGGTCGACTGGCCGTATCAGAGCCATGTCGCGGCGCGCGCGATTTCGCAGATGCGCG GCGTGACGGGCGTGACGAACCAGATCGAGGTGCTCGGCGACATCAGCGCCGACGAGATCGCGGGCGGCATCCGGCGCGCG ATGCAGCGCCATGCGGAGCGCGAGGCGAATCATATCGACGTGACGGTCAAGGACGGCACCGTCACGCTGGCGGGCAAGGT TGGCTCGTATGCGGAGCGCGCGGTCGCGCGCGGCGCCGCCTGGTCGGCGCGCGGCGTGCGGGCGGTGGTCGACGATCTGG TTGTCGAGTGA
Upstream 100 bases:
>100_bases GCCGGTCCGCACTTGACGTGCATCAGGAAATTCGCGGCGTGCGTATGCAAAGCTGTTCCGATGCGGCGGATGCGCGCCGC GTTTTCCGGTGGAGCGAGCG
Downstream 100 bases:
>100_bases TGACGGGTGCGAATCGCAGGGGGGAGCGAGCGGCGTGCGCGTCGGGCGCGATGGGCGTGAGCAGGCGCGATCGGCGCGAT ATGCAACACGGGCCGTATTC
Product: OsmY domain-containing protein
Products: NA
Alternate protein names: Osmotically Inducible Protein Y Domain Protein; Osmotically Inducible Protein Y; Lipoprotein; Transport Associated Protein; Periplasmic Or Secreted Lipoprotein; Osmotically Inducible Periplasmic Protein OsmY; Osmotically-Inducible Protein Y
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MKTDRQIKQEVEDELTGDPMIDVAHFDVDVAGHIVTLTGHPSSYAEKLAAEKAANRVAGVRAVVVDVQVRLPSDDVRTDE AIADAVRSTLHWTVGLHDAAVHVQVEAGWVTLSGQVDWPYQSHVAARAISQMRGVTGVTNQIEVLGDISADEIAGGIRRA MQRHAEREANHIDVTVKDGTVTLAGKVGSYAERAVARGAAWSARGVRAVVDDLVVE
Sequences:
>Translated_216_residues MKTDRQIKQEVEDELTGDPMIDVAHFDVDVAGHIVTLTGHPSSYAEKLAAEKAANRVAGVRAVVVDVQVRLPSDDVRTDE AIADAVRSTLHWTVGLHDAAVHVQVEAGWVTLSGQVDWPYQSHVAARAISQMRGVTGVTNQIEVLGDISADEIAGGIRRA MQRHAEREANHIDVTVKDGTVTLAGKVGSYAERAVARGAAWSARGVRAVVDDLVVE >Mature_216_residues MKTDRQIKQEVEDELTGDPMIDVAHFDVDVAGHIVTLTGHPSSYAEKLAAEKAANRVAGVRAVVVDVQVRLPSDDVRTDE AIADAVRSTLHWTVGLHDAAVHVQVEAGWVTLSGQVDWPYQSHVAARAISQMRGVTGVTNQIEVLGDISADEIAGGIRRA MQRHAEREANHIDVTVKDGTVTLAGKVGSYAERAVARGAAWSARGVRAVVDDLVVE
Specific function: Unknown
COG id: COG2823
COG function: function code R; Predicted periplasmic or secreted lipoprotein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23168; Mature: 23168
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: PS50914 BON
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTDRQIKQEVEDELTGDPMIDVAHFDVDVAGHIVTLTGHPSSYAEKLAAEKAANRVAGV CCCHHHHHHHHHHHCCCCCEEEEEEECEEECCEEEEEECCCHHHHHHHHHHHHHHHHHCE RAVVVDVQVRLPSDDVRTDEAIADAVRSTLHWTVGLHDAAVHVQVEAGWVTLSGQVDWPY EEEEEEEEEECCCCCCCHHHHHHHHHHHHHEEEEEEECEEEEEEEEECEEEEECEECCCH QSHVAARAISQMRGVTGVTNQIEVLGDISADEIAGGIRRAMQRHAEREANHIDVTVKDGT HHHHHHHHHHHHCCCCCCCCHHHEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCE VTLAGKVGSYAERAVARGAAWSARGVRAVVDDLVVE EEEECCCCHHHHHHHHCCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure MKTDRQIKQEVEDELTGDPMIDVAHFDVDVAGHIVTLTGHPSSYAEKLAAEKAANRVAGV CCCHHHHHHHHHHHCCCCCEEEEEEECEEECCEEEEEECCCHHHHHHHHHHHHHHHHHCE RAVVVDVQVRLPSDDVRTDEAIADAVRSTLHWTVGLHDAAVHVQVEAGWVTLSGQVDWPY EEEEEEEEEECCCCCCCHHHHHHHHHHHHHEEEEEEECEEEEEEEEECEEEEECEECCCH QSHVAARAISQMRGVTGVTNQIEVLGDISADEIAGGIRRAMQRHAEREANHIDVTVKDGT HHHHHHHHHHHHCCCCCCCCHHHEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCE VTLAGKVGSYAERAVARGAAWSARGVRAVVDDLVVE EEEECCCCHHHHHHHHCCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA