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The map label for this gene is rbsB [H]

Identifier: 126446171

GI number: 126446171

Start: 1728612

End: 1729625

Strand: Reverse

Name: rbsB [H]

Synonym: BMA10247_A1793

Alternate gene names: 126446171

Gene position: 1729625-1728612 (Counterclockwise)

Preceding gene: 126447858

Following gene: 126447826

Centisome position: 73.52

GC content: 68.05

Gene sequence:

>1014_bases
ATGACGTGGATCAATCGCGGGCGAGCATTCGCCGGATGCGTCGCGCTGGCGGGTGCGCTCGCCGCCGCGCCGGCGGGCGC
GGACACGGGCAAGGTCGGGCTCGACCTGCCTTTGCTGACCTCGCCGTTCTGGCAGTCGTACAACCGCTACCTGCTGCATT
ACGCGAAGGACATGCAGATCGATGCGCTCGCGCCCGTCAATTCGAACGGCGATCCCGCGCAGCAGATCACGGACATGAAC
ACCCTGCTGAATCTCGGCGCGAAGGGCATCGTCGTCGGCCCGCTCGATTCGGCGGCGATCGGCCGCGCGCTCGATGCGGC
GGCCGCGCGCAACGTGCCCGTCGTCGCCGTCGACGTCGCGCCGACGCAGGGCAAGGTCGCGATGGTCGTGCGCGCCGACA
ATCGCGCGTACGGCGAGAAGGCGTGCCAGTATCTCGGCGAGCACGTGCGCCGCGGCAAGGTCGTGCAGATCATGGGCGAT
CTCGCGTCGGTGAACGGCCGCGATCGCTCGGAGGCGTTCCGCGCATGCATGAAGGGCTATCCGAACCTGCAGGTGCTCGA
GATTCCGGCCGCCTGGAAGGGCGACGTCGCCGCGACCGCGCTCGACAGCCTGCTGAGCGCGAATCCGGACGTGAAGGGCA
TCTACCTGCAGGCGGGCGGCGTCTATCTGTCGCCGACGCTGCAAACGCTGCGCCGCAAGCAGATGCTGTATCCGGCGGGT
GACGCGAAGCACGTCGCGATCGTCAGCAACGACGGCATCCCGCAGGAATACGAAGCGATCCGCCGCGGCGACATCGACGC
CACCGTGTCGCAACCGGCCGATCTGTACGCGCGCTACGGGCTTTTCTACATCAAGGCGGCGCTCGCCGGCCGAACCTTCA
AGCCGGGGCCGACCGATCACGGCAGCGTGATCGTGCAGCGCGCGCCCGGCGTGCTCGAGGATCAGTTGCCGGCACCGCTC
GTGACGAAGGCGAACGTCGACGACAAGGGCCTGTGGGGCAACACGATCAAATGA

Upstream 100 bases:

>100_bases
ACTTCAAAAAGTCCGTATATAAATAATAATTTCGCCAGTGAACATATGGCAACGGTCCGCACGCCGGGCCGATAAACGTC
GGAGGAAACAGGAGACAGGC

Downstream 100 bases:

>100_bases
ACGCGATCGCCGCCGTCACCGCGCGCGCCTGCACCGACGCCGGCGCGCCCGTCGTCGAGGCGCGCGCGCTCACGAAGCGC
TTCGGCCCGCACATCGCGCT

Product: carbohydrate ABC transporter periplasmic sugar-binding protein

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 336

Protein sequence:

>337_residues
MTWINRGRAFAGCVALAGALAAAPAGADTGKVGLDLPLLTSPFWQSYNRYLLHYAKDMQIDALAPVNSNGDPAQQITDMN
TLLNLGAKGIVVGPLDSAAIGRALDAAAARNVPVVAVDVAPTQGKVAMVVRADNRAYGEKACQYLGEHVRRGKVVQIMGD
LASVNGRDRSEAFRACMKGYPNLQVLEIPAAWKGDVAATALDSLLSANPDVKGIYLQAGGVYLSPTLQTLRRKQMLYPAG
DAKHVAIVSNDGIPQEYEAIRRGDIDATVSQPADLYARYGLFYIKAALAGRTFKPGPTDHGSVIVQRAPGVLEDQLPAPL
VTKANVDDKGLWGNTIK

Sequences:

>Translated_337_residues
MTWINRGRAFAGCVALAGALAAAPAGADTGKVGLDLPLLTSPFWQSYNRYLLHYAKDMQIDALAPVNSNGDPAQQITDMN
TLLNLGAKGIVVGPLDSAAIGRALDAAAARNVPVVAVDVAPTQGKVAMVVRADNRAYGEKACQYLGEHVRRGKVVQIMGD
LASVNGRDRSEAFRACMKGYPNLQVLEIPAAWKGDVAATALDSLLSANPDVKGIYLQAGGVYLSPTLQTLRRKQMLYPAG
DAKHVAIVSNDGIPQEYEAIRRGDIDATVSQPADLYARYGLFYIKAALAGRTFKPGPTDHGSVIVQRAPGVLEDQLPAPL
VTKANVDDKGLWGNTIK
>Mature_336_residues
TWINRGRAFAGCVALAGALAAAPAGADTGKVGLDLPLLTSPFWQSYNRYLLHYAKDMQIDALAPVNSNGDPAQQITDMNT
LLNLGAKGIVVGPLDSAAIGRALDAAAARNVPVVAVDVAPTQGKVAMVVRADNRAYGEKACQYLGEHVRRGKVVQIMGDL
ASVNGRDRSEAFRACMKGYPNLQVLEIPAAWKGDVAATALDSLLSANPDVKGIYLQAGGVYLSPTLQTLRRKQMLYPAGD
AKHVAIVSNDGIPQEYEAIRRGDIDATVSQPADLYARYGLFYIKAALAGRTFKPGPTDHGSVIVQRAPGVLEDQLPAPLV
TKANVDDKGLWGNTIK

Specific function: Involved in the high-affinity D-ribose membrane transport system and also serves as the primary chemoreceptor for chemotaxis [H]

COG id: COG1879

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790192, Length=299, Percent_Identity=26.4214046822742, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1790526, Length=271, Percent_Identity=25.830258302583, Blast_Score=68, Evalue=1e-12,

Paralogues:

None

Copy number: 3940 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 5900 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 1520 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001761 [H]

Pfam domain/function: PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 35760; Mature: 35629

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTWINRGRAFAGCVALAGALAAAPAGADTGKVGLDLPLLTSPFWQSYNRYLLHYAKDMQI
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCE
DALAPVNSNGDPAQQITDMNTLLNLGAKGIVVGPLDSAAIGRALDAAAARNVPVVAVDVA
EEECCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEC
PTQGKVAMVVRADNRAYGEKACQYLGEHVRRGKVVQIMGDLASVNGRDRSEAFRACMKGY
CCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEHHHHHCCCCCHHHHHHHHHCCC
PNLQVLEIPAAWKGDVAATALDSLLSANPDVKGIYLQAGGVYLSPTLQTLRRKQMLYPAG
CCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCEEECHHHHHHHHHHHCCCCC
DAKHVAIVSNDGIPQEYEAIRRGDIDATVSQPADLYARYGLFYIKAALAGRTFKPGPTDH
CCCEEEEEECCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
GSVIVQRAPGVLEDQLPAPLVTKANVDDKGLWGNTIK
CCEEEECCCCCHHHCCCCCEEEECCCCCCCCCCCCCC
>Mature Secondary Structure 
TWINRGRAFAGCVALAGALAAAPAGADTGKVGLDLPLLTSPFWQSYNRYLLHYAKDMQI
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCE
DALAPVNSNGDPAQQITDMNTLLNLGAKGIVVGPLDSAAIGRALDAAAARNVPVVAVDVA
EEECCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEC
PTQGKVAMVVRADNRAYGEKACQYLGEHVRRGKVVQIMGDLASVNGRDRSEAFRACMKGY
CCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEHHHHHCCCCCHHHHHHHHHCCC
PNLQVLEIPAAWKGDVAATALDSLLSANPDVKGIYLQAGGVYLSPTLQTLRRKQMLYPAG
CCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCEEECHHHHHHHHHHHCCCCC
DAKHVAIVSNDGIPQEYEAIRRGDIDATVSQPADLYARYGLFYIKAALAGRTFKPGPTDH
CCCEEEEEECCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
GSVIVQRAPGVLEDQLPAPLVTKANVDDKGLWGNTIK
CCEEEECCCCCHHHCCCCCEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6313683; 7686882; 9278503; 3011793; 3011794; 8899705; 9298646; 1583688; 7982928; 9641984 [H]