Definition Burkholderia mallei NCTC 10247 chromosome II, complete genome.
Accession NC_009079
Length 2,352,693

Click here to switch to the map view.

The map label for this gene is 126445810

Identifier: 126445810

GI number: 126445810

Start: 237875

End: 239077

Strand: Direct

Name: 126445810

Synonym: BMA10247_A0275

Alternate gene names: NA

Gene position: 237875-239077 (Clockwise)

Preceding gene: 126446447

Following gene: 126447866

Centisome position: 10.11

GC content: 68.66

Gene sequence:

>1203_bases
ATGAGGAGGAGCGAATTGAAATTCAACTGCATCGCAGCAACCATCCTGGCCGCGGTCGCCGCCGACGCGACGGCGGCCGG
CGCGTGCCTGAACGGCTCCACGATCGCCTCGACGACGCGTGCGCCGCTCGTCGCGCGACAGGGCTCGGTGTTCTCGTCGA
CGCTCTATGATCCGGCGATCACGTCGAACAATCGCACGCACAATCCCGTCATGCTGACGGTCAAGGTGACGAACAACGGG
CGGCCGGTCGCCGGCTGCGACGTCGCCTGGCAGCCGCGCGGCGCGGGCGGCGCGTCGGGATGGCTCTTCCCGGCGAGCGC
GTCGACCGACGCCAACGGGATCGCGTCCGCGTGGTGGGTCGCCGGCAGCGGCGCCGCGCAGACGGCGGTGGCGAGCATCC
GCCGGTTCGACGGCACGACGCAGGGCGTCGCGATCGGCGGCTCGGCGCAGCCGCACGCGACGCGCGCGAATTCGATCCAT
CTGAACTACGAGCCGGCGAGCGACTGGACCGCGTTCAGGGTCGACGTGACGCCCGAAGCGCTCGCGCCGACCACCTATTG
GGAGGCGATCGGCTGGCCGGGCGCGTACACCGGCATCCAGTCGATCGACGGCAAGCAGAACGGACTCGTGCTGTTCTCCG
TGTGGGACGTGAACGGCAAGTCGCCTCAAATCATCGCGAAAGGGCCCGGCGTCGATTGCACGCAGTTCGGCGGCGAAGGC
ACCGGCTACAAGTGCGCCAAGCGCCATGCGCCCGTCGCGGGCCGCACCTACCGCTTCATGGCGTCGATCGCGCCGGTCGC
AGGACAGAACCAGACCGACTATTCGGTCTGGTTCACCGACACCTCGACCAACGCGCGCGAGCTGATCGCGACGCTGCGCT
ACCAGAAGGCCGTCCAGTCGGCGAACTACGCGAACAGCTTCGTCGAGGATTGGGCGACGCAGGGCGCGTCGTGTCTCGGC
GCGACGCAGCGCGCCGGGCAGTACGGCAACGTATGGGCGCTCGACAGGGCGTCCGCGCAGTGGCGCACGGTCAAGCGGGC
ATCGACCTCGGCCGTCTACACGCCGGATCACAACGAAGTCTGCTCGAACTATCAGTTCTCGGTGGTCAACGGCCGCTTCC
GGATGAGCACGGGCGGCCATGCGGTCGGACAGCCGCTCAATCTGCCGAACGGGCCGAAGTCGTTTCCGCTGACGCTGCCC
TGA

Upstream 100 bases:

>100_bases
AAAAAGATCGAATTATCCTGTCGAATAAGGTCGGTTATTCGATCGAATCCGCTTCCCTCGCTTATAGTGCGCGACGTATA
CCCGCGAATCGAAATGCCCG

Downstream 100 bases:

>100_bases
TGCGTCGGCCCGGCGCCCGGCCGTGCGACACGGCCCGGTGCGCCGACACGCCGTGCGCACCGGCGGGGCGCGCGCGGCCC
GGCGCCGCGCGCGGCGACAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MRRSELKFNCIAATILAAVAADATAAGACLNGSTIASTTRAPLVARQGSVFSSTLYDPAITSNNRTHNPVMLTVKVTNNG
RPVAGCDVAWQPRGAGGASGWLFPASASTDANGIASAWWVAGSGAAQTAVASIRRFDGTTQGVAIGGSAQPHATRANSIH
LNYEPASDWTAFRVDVTPEALAPTTYWEAIGWPGAYTGIQSIDGKQNGLVLFSVWDVNGKSPQIIAKGPGVDCTQFGGEG
TGYKCAKRHAPVAGRTYRFMASIAPVAGQNQTDYSVWFTDTSTNARELIATLRYQKAVQSANYANSFVEDWATQGASCLG
ATQRAGQYGNVWALDRASAQWRTVKRASTSAVYTPDHNEVCSNYQFSVVNGRFRMSTGGHAVGQPLNLPNGPKSFPLTLP

Sequences:

>Translated_400_residues
MRRSELKFNCIAATILAAVAADATAAGACLNGSTIASTTRAPLVARQGSVFSSTLYDPAITSNNRTHNPVMLTVKVTNNG
RPVAGCDVAWQPRGAGGASGWLFPASASTDANGIASAWWVAGSGAAQTAVASIRRFDGTTQGVAIGGSAQPHATRANSIH
LNYEPASDWTAFRVDVTPEALAPTTYWEAIGWPGAYTGIQSIDGKQNGLVLFSVWDVNGKSPQIIAKGPGVDCTQFGGEG
TGYKCAKRHAPVAGRTYRFMASIAPVAGQNQTDYSVWFTDTSTNARELIATLRYQKAVQSANYANSFVEDWATQGASCLG
ATQRAGQYGNVWALDRASAQWRTVKRASTSAVYTPDHNEVCSNYQFSVVNGRFRMSTGGHAVGQPLNLPNGPKSFPLTLP
>Mature_400_residues
MRRSELKFNCIAATILAAVAADATAAGACLNGSTIASTTRAPLVARQGSVFSSTLYDPAITSNNRTHNPVMLTVKVTNNG
RPVAGCDVAWQPRGAGGASGWLFPASASTDANGIASAWWVAGSGAAQTAVASIRRFDGTTQGVAIGGSAQPHATRANSIH
LNYEPASDWTAFRVDVTPEALAPTTYWEAIGWPGAYTGIQSIDGKQNGLVLFSVWDVNGKSPQIIAKGPGVDCTQFGGEG
TGYKCAKRHAPVAGRTYRFMASIAPVAGQNQTDYSVWFTDTSTNARELIATLRYQKAVQSANYANSFVEDWATQGASCLG
ATQRAGQYGNVWALDRASAQWRTVKRASTSAVYTPDHNEVCSNYQFSVVNGRFRMSTGGHAVGQPLNLPNGPKSFPLTLP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42192; Mature: 42192

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRSELKFNCIAATILAAVAADATAAGACLNGSTIASTTRAPLVARQGSVFSSTLYDPAI
CCCCCCCHHHHHHHHHHHHHHCCHHCCEEECCCEECCCCCCCEEEECCCCHHHHCCCCCC
TSNNRTHNPVMLTVKVTNNGRPVAGCDVAWQPRGAGGASGWLFPASASTDANGIASAWWV
CCCCCCCCCEEEEEEECCCCCEEECCCEEECCCCCCCCCCEEEECCCCCCCCCCEEEEEE
AGSGAAQTAVASIRRFDGTTQGVAIGGSAQPHATRANSIHLNYEPASDWTAFRVDVTPEA
ECCCHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCEEEEEECCCCCCEEEEEECCHHH
LAPTTYWEAIGWPGAYTGIQSIDGKQNGLVLFSVWDVNGKSPQIIAKGPGVDCTQFGGEG
CCCCHHHHHCCCCCHHCCCHHCCCCCCCEEEEEEEECCCCCCEEEEECCCCCHHHCCCCC
TGYKCAKRHAPVAGRTYRFMASIAPVAGQNQTDYSVWFTDTSTNARELIATLRYQKAVQS
CCCCHHHHCCCCCCCHHEEHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHH
ANYANSFVEDWATQGASCLGATQRAGQYGNVWALDRASAQWRTVKRASTSAVYTPDHNEV
HHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEECCCCHHHHHHHCCCCEEECCCCHHH
CSNYQFSVVNGRFRMSTGGHAVGQPLNLPNGPKSFPLTLP
HCCEEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRRSELKFNCIAATILAAVAADATAAGACLNGSTIASTTRAPLVARQGSVFSSTLYDPAI
CCCCCCCHHHHHHHHHHHHHHCCHHCCEEECCCEECCCCCCCEEEECCCCHHHHCCCCCC
TSNNRTHNPVMLTVKVTNNGRPVAGCDVAWQPRGAGGASGWLFPASASTDANGIASAWWV
CCCCCCCCCEEEEEEECCCCCEEECCCEEECCCCCCCCCCEEEECCCCCCCCCCEEEEEE
AGSGAAQTAVASIRRFDGTTQGVAIGGSAQPHATRANSIHLNYEPASDWTAFRVDVTPEA
ECCCHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCEEEEEECCCCCCEEEEEECCHHH
LAPTTYWEAIGWPGAYTGIQSIDGKQNGLVLFSVWDVNGKSPQIIAKGPGVDCTQFGGEG
CCCCHHHHHCCCCCHHCCCHHCCCCCCCEEEEEEEECCCCCCEEEEECCCCCHHHCCCCC
TGYKCAKRHAPVAGRTYRFMASIAPVAGQNQTDYSVWFTDTSTNARELIATLRYQKAVQS
CCCCHHHHCCCCCCCHHEEHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHH
ANYANSFVEDWATQGASCLGATQRAGQYGNVWALDRASAQWRTVKRASTSAVYTPDHNEV
HHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEECCCCHHHHHHHCCCCEEECCCCHHH
CSNYQFSVVNGRFRMSTGGHAVGQPLNLPNGPKSFPLTLP
HCCEEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA