Click here to switch to the map view.

The map label for this gene is 126445745

Identifier: 126445745

GI number: 126445745

Start: 144892

End: 146028

Strand: Direct

Name: 126445745

Synonym: BMA10247_A0172

Alternate gene names: NA

Gene position: 144892-146028 (Clockwise)

Preceding gene: 126446475

Following gene: 126447516

Centisome position: 6.16

GC content: 64.47

Gene sequence:

>1137_bases
GTGAACGGAATCCTCAGGCTCGCGTTCAAGCTGCTCGTCAACGACAGCGCGAAGTTCACCGCGCTGCTCGTCGGGATCAC
GTTCGCCGTGTTCCTGATGGTCGAGATGACCTCGCTGTTCGCCGGGATCCTCGACAAATCGTCGTCGACCGTCATCAACG
TCGGCGCGAAGATGTGGGTGATGGACCCGGGCGTGCAGACGATCGCGAGCAGCATCGGGATGCCCGCCTACGTGCTCGAC
GCGGTGCGCAGCGTCGACGGCGTCAAGTACGCGGTGCCGATCTACTCGGGCGGCGCGCTCGTGAAGCTCGCCGACGGCAC
CTATCAGGCGGTCACGGTGATCGGCCTGGACGATGCGAGCCTGCTCGGCCGCCCGACGATGAAGGCGGGCCGCATCGAGG
ACATCTACGCGGAAAACGGCTTCATCGCGATCGACGACGCCGAGTTCCCGAAGCTGAAGAATCCCGCGCTCGGCACGACG
TTCGAGCTGAACGACCACCGCGGCGTGATCGTCGGCATCGCGAAGGTCGCGAGCAGCGGCCTGTTCGGCACGCCGACGCT
CTATACCACCTATGCACGCGCGACGCGCTACATTCCGTCGACGCGCTACACGACGTCGTACATTCTCGTCGAGCCGAAGT
CGCAGCGCGACATCGCGCGCATCAAGCGGGAGGTCGCCGCGCTCGGCTATCGCGCGTACACGAAGGAAGAATTCATGCGG
CGCATCTCGGACTTCTACAAGTACGAGACGGGCGTCGGCACGAACATCCTGCTGATGACGGCGATCAGCTTCATCGTCGG
GCTGTCGATCTCGGGCCAGACCTTCTATGCGTTCATCATCGAGAACCTCGAGAAATTCGGCGCGCTGAAGGCGATCGGCG
CGAAGAACCGCGAGCTCGTCGCGATGATCCTGTTTCAGGCGACATTCACCGCGCTCACCGGCTATGGCCTGGGCGTCGGC
CTCTGCAGCGCGCTCATCAGCGTCGCGCGGCTGCGCCTGCCGAGCTACGCGGCGCTCATCACGTACGGCAATCTCGCGCT
CGCGTTCGGCATGGTCGTCGTGATCGCGGGGCTGTCGAGCTATCTGGGCGTGCGCCGCGTGCTGCGCATCGAGCCGTTCG
ACATTTTCAGGGGATGA

Upstream 100 bases:

>100_bases
GCTTCGTCGACCTGTATTACCGGCCGATCTTCGCCCCCGCGTTCGCGCGGCAGCGCGTCGCGTTCGTCCATCGTCGCCGG
GGGGCCGCGCGCGACGTATC

Downstream 100 bases:

>100_bases
CGATGGCGGGGCTGGCGATCGATGCGCGCGGGCTCACCAAGTGGTTCGGTGAGGGCGAGGCCCGCACGCGCGCGCTCGCC
GACGTATCGGTGCAGGCGCG

Product: efflux ABC transporter, permease protein

Products: NA

Alternate protein names: ABC Transporter Permease Protein; ABC-Transporter Permease Protein; Efflux ABC Transporter Permease Protein; DevC Protein; ABC Transporter Membrane Protein; ABC-Type Export System Membrane Protein; Antimicrobial Peptide ABC Transporter Permease; ABC Efflux Pump Inner Membrane Subunit; ABC-Type Transport System Permease Component; ABC Transporter Permease Component

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MNGILRLAFKLLVNDSAKFTALLVGITFAVFLMVEMTSLFAGILDKSSSTVINVGAKMWVMDPGVQTIASSIGMPAYVLD
AVRSVDGVKYAVPIYSGGALVKLADGTYQAVTVIGLDDASLLGRPTMKAGRIEDIYAENGFIAIDDAEFPKLKNPALGTT
FELNDHRGVIVGIAKVASSGLFGTPTLYTTYARATRYIPSTRYTTSYILVEPKSQRDIARIKREVAALGYRAYTKEEFMR
RISDFYKYETGVGTNILLMTAISFIVGLSISGQTFYAFIIENLEKFGALKAIGAKNRELVAMILFQATFTALTGYGLGVG
LCSALISVARLRLPSYAALITYGNLALAFGMVVVIAGLSSYLGVRRVLRIEPFDIFRG

Sequences:

>Translated_378_residues
MNGILRLAFKLLVNDSAKFTALLVGITFAVFLMVEMTSLFAGILDKSSSTVINVGAKMWVMDPGVQTIASSIGMPAYVLD
AVRSVDGVKYAVPIYSGGALVKLADGTYQAVTVIGLDDASLLGRPTMKAGRIEDIYAENGFIAIDDAEFPKLKNPALGTT
FELNDHRGVIVGIAKVASSGLFGTPTLYTTYARATRYIPSTRYTTSYILVEPKSQRDIARIKREVAALGYRAYTKEEFMR
RISDFYKYETGVGTNILLMTAISFIVGLSISGQTFYAFIIENLEKFGALKAIGAKNRELVAMILFQATFTALTGYGLGVG
LCSALISVARLRLPSYAALITYGNLALAFGMVVVIAGLSSYLGVRRVLRIEPFDIFRG
>Mature_378_residues
MNGILRLAFKLLVNDSAKFTALLVGITFAVFLMVEMTSLFAGILDKSSSTVINVGAKMWVMDPGVQTIASSIGMPAYVLD
AVRSVDGVKYAVPIYSGGALVKLADGTYQAVTVIGLDDASLLGRPTMKAGRIEDIYAENGFIAIDDAEFPKLKNPALGTT
FELNDHRGVIVGIAKVASSGLFGTPTLYTTYARATRYIPSTRYTTSYILVEPKSQRDIARIKREVAALGYRAYTKEEFMR
RISDFYKYETGVGTNILLMTAISFIVGLSISGQTFYAFIIENLEKFGALKAIGAKNRELVAMILFQATFTALTGYGLGVG
LCSALISVARLRLPSYAALITYGNLALAFGMVVVIAGLSSYLGVRRVLRIEPFDIFRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40910; Mature: 40910

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: PS00178 AA_TRNA_LIGASE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGILRLAFKLLVNDSAKFTALLVGITFAVFLMVEMTSLFAGILDKSSSTVINVGAKMWV
CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEE
MDPGVQTIASSIGMPAYVLDAVRSVDGVKYAVPIYSGGALVKLADGTYQAVTVIGLDDAS
ECCCHHHHHHHCCCHHHHHHHHHHCCCCEEEEEEECCCEEEEEECCCEEEEEEEECCCHH
LLGRPTMKAGRIEDIYAENGFIAIDDAEFPKLKNPALGTTFELNDHRGVIVGIAKVASSG
HCCCCCCCCCCCCEEEECCCEEEECCCCCCCCCCCCCCCEEEECCCCEEEEEHHHHHCCC
LFGTPTLYTTYARATRYIPSTRYTTSYILVEPKSQRDIARIKREVAALGYRAYTKEEFMR
CCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RISDFYKYETGVGTNILLMTAISFIVGLSISGQTFYAFIIENLEKFGALKAIGAKNRELV
HHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHCCCCCHHHH
AMILFQATFTALTGYGLGVGLCSALISVARLRLPSYAALITYGNLALAFGMVVVIAGLSS
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEHEEECHHHHHHHHHHHHHHHHH
YLGVRRVLRIEPFDIFRG
HHHHHHHHCCCCHHHCCC
>Mature Secondary Structure
MNGILRLAFKLLVNDSAKFTALLVGITFAVFLMVEMTSLFAGILDKSSSTVINVGAKMWV
CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEE
MDPGVQTIASSIGMPAYVLDAVRSVDGVKYAVPIYSGGALVKLADGTYQAVTVIGLDDAS
ECCCHHHHHHHCCCHHHHHHHHHHCCCCEEEEEEECCCEEEEEECCCEEEEEEEECCCHH
LLGRPTMKAGRIEDIYAENGFIAIDDAEFPKLKNPALGTTFELNDHRGVIVGIAKVASSG
HCCCCCCCCCCCCEEEECCCEEEECCCCCCCCCCCCCCCEEEECCCCEEEEEHHHHHCCC
LFGTPTLYTTYARATRYIPSTRYTTSYILVEPKSQRDIARIKREVAALGYRAYTKEEFMR
CCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RISDFYKYETGVGTNILLMTAISFIVGLSISGQTFYAFIIENLEKFGALKAIGAKNRELV
HHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHCCCCCHHHH
AMILFQATFTALTGYGLGVGLCSALISVARLRLPSYAALITYGNLALAFGMVVVIAGLSS
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEHEEECHHHHHHHHHHHHHHHHH
YLGVRRVLRIEPFDIFRG
HHHHHHHHCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA