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The map label for this gene is benC [H]

Identifier: 126445721

GI number: 126445721

Start: 180760

End: 181779

Strand: Reverse

Name: benC [H]

Synonym: BMA10247_A0213

Alternate gene names: 126445721

Gene position: 181779-180760 (Counterclockwise)

Preceding gene: 126447624

Following gene: 126446103

Centisome position: 7.73

GC content: 71.08

Gene sequence:

>1020_bases
ATGGAACACCGCATCGCCCTGCAGTTCGAAGACGGCGTCACCCGCTTCATCGCCTGCCGCGACGGCGAGACGCTCGCCGA
CGCCGCGTATCGCCAGCAGATCAACCTCCCGCTCGATTGCCGCGACGGCGCGTGCGGCACGTGCCGCTGCCGGTGCGAAT
CCGGCGACTACGCGCTGCCCGCGTCGAGCTACATCGAAGACGCGCTGACGGCTAACGAGGCCGCGCAGCGCTACGTGCTC
GCGTGCCAGACGCGCCCGCGCTCCGATTGCGTGATCGACGTGCCCGCGTCGTCCGCCGCATGCAAGACGGGCGCCGCGCG
CCACGAGGGCACGCTCGCGTCGGTCGAGCGGCTGTCCGCGTCGACGATTCATTTCTCGATCGACGTCGACGAGCCCGCGA
AGCTCGCCTTTCTCGCCGGGCAGTACGTGAACGTCGAGATTCCCGGCCTCGGCGCGACGCGCTCGTACTCGTTCAGCTCG
CGCCCGGGCGACGCGCGCGTGTCGTTTCTCGTGCGCAACGTGCCGGGCGGGCGAATGAGCCGCTATCTCACCGACGAGGC
CGCGCCCGGCCAGCGGATCGCGTTCTCCGGGCCGCACGGCAGCTTTTACCTGCGCGACGCCGCGCGGCCCGCGCTCTTTC
TCGCGGGCGGCACCGGCATCGCGCCGTTCCTGTCGATGCTCGACGTCTGCGCATCGCGCGACGGCGCGCCGCCCGTGCGG
CTCGTCTACGGCGTCACGCGCGACGACGATCTCGTCGCGCTCGAGCGCCTCGGCGACGTCGAGCGCCGCCTCGCCGGCTT
CGCGTACCGGACCTGCGTCGCGGACGAGGCGAGCGCGCACCCACGCAAGGGCTACGTGAGCGCGCACGTCGAGCCCGAAT
GGCTGAACGGCGGCGACGTCGACATCTATCTGTGCGGCCCGGCGCCGATGGTCGACGCGGTGCAGGCCTGGCTGCGCGAG
CGCGGCGTCACGCCGGCCAATCTGTACTTCGAAAAATTCTCGTCGAGCAACGCACCATGA

Upstream 100 bases:

>100_bases
TACGTCGTCCTGAAGAACGACTACATCAACCAGCTGATCGACATCTACCACATCTAGCCGGTGCGCGCCGCGGCAGCGCG
GCCCGCTCGAGGAACGCATC

Downstream 100 bases:

>100_bases
ATACTCACCACGCACCCGGCCGCTTCAGCGGCAAGGTGACGATCGTCACGGGCGCCGCGCAGGGCATCGGCCGCGGTGTC
GCGCGGCGCGCGGCGCGCGA

Product: benzoate 1,2 dioxygenase, electron transfer component

Products: NA

Alternate protein names: Ferredoxin; Ferredoxin--NAD(+) reductase [H]

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MEHRIALQFEDGVTRFIACRDGETLADAAYRQQINLPLDCRDGACGTCRCRCESGDYALPASSYIEDALTANEAAQRYVL
ACQTRPRSDCVIDVPASSAACKTGAARHEGTLASVERLSASTIHFSIDVDEPAKLAFLAGQYVNVEIPGLGATRSYSFSS
RPGDARVSFLVRNVPGGRMSRYLTDEAAPGQRIAFSGPHGSFYLRDAARPALFLAGGTGIAPFLSMLDVCASRDGAPPVR
LVYGVTRDDDLVALERLGDVERRLAGFAYRTCVADEASAHPRKGYVSAHVEPEWLNGGDVDIYLCGPAPMVDAVQAWLRE
RGVTPANLYFEKFSSSNAP

Sequences:

>Translated_339_residues
MEHRIALQFEDGVTRFIACRDGETLADAAYRQQINLPLDCRDGACGTCRCRCESGDYALPASSYIEDALTANEAAQRYVL
ACQTRPRSDCVIDVPASSAACKTGAARHEGTLASVERLSASTIHFSIDVDEPAKLAFLAGQYVNVEIPGLGATRSYSFSS
RPGDARVSFLVRNVPGGRMSRYLTDEAAPGQRIAFSGPHGSFYLRDAARPALFLAGGTGIAPFLSMLDVCASRDGAPPVR
LVYGVTRDDDLVALERLGDVERRLAGFAYRTCVADEASAHPRKGYVSAHVEPEWLNGGDVDIYLCGPAPMVDAVQAWLRE
RGVTPANLYFEKFSSSNAP
>Mature_339_residues
MEHRIALQFEDGVTRFIACRDGETLADAAYRQQINLPLDCRDGACGTCRCRCESGDYALPASSYIEDALTANEAAQRYVL
ACQTRPRSDCVIDVPASSAACKTGAARHEGTLASVERLSASTIHFSIDVDEPAKLAFLAGQYVNVEIPGLGATRSYSFSS
RPGDARVSFLVRNVPGGRMSRYLTDEAAPGQRIAFSGPHGSFYLRDAARPALFLAGGTGIAPFLSMLDVCASRDGAPPVR
LVYGVTRDDDLVALERLGDVERRLAGFAYRTCVADEASAHPRKGYVSAHVEPEWLNGGDVDIYLCGPAPMVDAVQAWLRE
RGVTPANLYFEKFSSSNAP

Specific function: Electron transfer component of benzoate 1,2-dioxygenase system [H]

COG id: COG0543

COG function: function code HC; 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

Organism=Escherichia coli, GI1790359, Length=210, Percent_Identity=29.0476190476191, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1787098, Length=204, Percent_Identity=27.9411764705882, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI1787658, Length=246, Percent_Identity=23.5772357723577, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1788903, Length=227, Percent_Identity=25.1101321585903, Blast_Score=62, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6322146, Length=193, Percent_Identity=30.0518134715026, Blast_Score=68, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR017927
- InterPro:   IPR001041
- InterPro:   IPR001709
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR001221
- InterPro:   IPR017938 [H]

Pfam domain/function: PF00970 FAD_binding_6; PF00111 Fer2; PF00175 NAD_binding_1 [H]

EC number: =1.18.1.3 [H]

Molecular weight: Translated: 36540; Mature: 36540

Theoretical pI: Translated: 5.44; Mature: 5.44

Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEHRIALQFEDGVTRFIACRDGETLADAAYRQQINLPLDCRDGACGTCRCRCESGDYALP
CCCEEEEEECCCCEEEEEECCCCHHHHHHHHHHCCCCEECCCCCCCEEEEEECCCCEECC
ASSYIEDALTANEAAQRYVLACQTRPRSDCVIDVPASSAACKTGAARHEGTLASVERLSA
HHHHHHHHHHHHHHHHEEEEEECCCCCCCCEEECCCCCCHHHCCCCCCCCHHHHHHHCCC
STIHFSIDVDEPAKLAFLAGQYVNVEIPGLGATRSYSFSSRPGDARVSFLVRNVPGGRMS
EEEEEEEECCCCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHH
RYLTDEAAPGQRIAFSGPHGSFYLRDAARPALFLAGGTGIAPFLSMLDVCASRDGAPPVR
HHHCCCCCCCCEEEEECCCCCEEEECCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCEE
LVYGVTRDDDLVALERLGDVERRLAGFAYRTCVADEASAHPRKGYVSAHVEPEWLNGGDV
EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCE
DIYLCGPAPMVDAVQAWLRERGVTPANLYFEKFSSSNAP
EEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCC
>Mature Secondary Structure
MEHRIALQFEDGVTRFIACRDGETLADAAYRQQINLPLDCRDGACGTCRCRCESGDYALP
CCCEEEEEECCCCEEEEEECCCCHHHHHHHHHHCCCCEECCCCCCCEEEEEECCCCEECC
ASSYIEDALTANEAAQRYVLACQTRPRSDCVIDVPASSAACKTGAARHEGTLASVERLSA
HHHHHHHHHHHHHHHHEEEEEECCCCCCCCEEECCCCCCHHHCCCCCCCCHHHHHHHCCC
STIHFSIDVDEPAKLAFLAGQYVNVEIPGLGATRSYSFSSRPGDARVSFLVRNVPGGRMS
EEEEEEEECCCCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHH
RYLTDEAAPGQRIAFSGPHGSFYLRDAARPALFLAGGTGIAPFLSMLDVCASRDGAPPVR
HHHCCCCCCCCEEEEECCCCCEEEECCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCEE
LVYGVTRDDDLVALERLGDVERRLAGFAYRTCVADEASAHPRKGYVSAHVEPEWLNGGDV
EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCE
DIYLCGPAPMVDAVQAWLRERGVTPANLYFEKFSSSNAP
EEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1885518 [H]