| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is plcN [H]
Identifier: 126445709
GI number: 126445709
Start: 78486
End: 80681
Strand: Direct
Name: plcN [H]
Synonym: BMA10247_A0095
Alternate gene names: 126445709
Gene position: 78486-80681 (Clockwise)
Preceding gene: 126447750
Following gene: 126446054
Centisome position: 3.34
GC content: 67.49
Gene sequence:
>2196_bases ATGAACGCTCGTCGCAGATTTCTGCAAGGCACCGCAACCACCGGCATCGCGGCCGCCACGTTGGCCGCGTTTCCGCTCAG CATTCGCCGCGCACTCGCGATTCCCGCCAACAACCGCACCGGAACCATCCGGGATGTCGAGCACATCGTCATCCTGATGC AGGAAAACCGCTCGTTCGACAACTACTTCGGCACGCTGCGCGGCGTGCGCGGCTTTGGCGACCGCTTCGGCATTCCGCTG CCGAACGCGCTGACGGTCTGGCAGCAGCGTAACGCGACGGGCGCGCTGGTGCTGCCCTATCACCTGGACGGCAGCAAGGG CAACGCACAGCGCGTCAGCGGCACGCCGCACTCGTGGGACGACGGCCAGAACGCGTGGGACGGCGGGCGCATGTATCAGT GGCCGCGCTACAAGAACACGGCGTCGATGGGCTACTTCCGGGAGAGCGAGCTGCCGTTCCAGTTCGCGCTCGCGAACGCG TTCACGATCTGCGATGCGTACCACTGCTCGATGCACGCGGGCACCAACTCCAACCGGATGTTCATGTGGACCGGCACCAA CGGCCCGACCGGCGCGGGCGTGGCCTCGGTGGTGAACGAATGGGACGACATCGGTCCCTCCACGTTCGGCTATGAGTGGA AGACCTATCCCGAGCGCTTGCAGGAAGCCGGTGTGAGCTGGAAGGTCTACCAGAACATGCCGGACAACTTCACCGATAAC GCGCTTGCCGGCTTCAGGCAGTACCGCCGCGCGAACGAGGCGTCGGGCAAGCCGGTGAGCAACAGCGACAAGGTGGTTTC GCCCGCATACGATCCGGCGAGCGACGACGTTCGCAACCCGCTGTACAAGGGCATCGCCAACACGATGCCCGACGGCGGCT TCCTCGGCGCCTTCAAGGAAGACATCCGTGCGGGCAAGCTGCCGCAGGTGTCGTGGGTGGTGGCGCCGGCCGCGTATTCC GAGCATCCGGGGCCGTCGAGCCCGGTGCAGGGCGCGTGGTACATCCAGGAGGTGCTCGATGCGCTCACCGCGACGCCGGA CGTCTGGAGCAAGACCGTGCTGCTCGTGAATTTCGACGAGAACGACGGCTACTTCGACCACGTGCCTTCGCCGTCGGCGC CGTCGCTGAATCCGGACGGCTCGCCGGCCGGCAAGACCACGCTGCCCGAGGCCGACATCGCGTTCGAGCGCTTCACCCAT CCGAAGCCGCCGGGCACCAAGAGCCAGCCGCAGCCCGACGCCCGCGTATATGGCCCCGGCGTGCGCGTGCCGATGTACGT GATCTCGCCGTGGAGCCGCGGCGGCTGGGTCAACTCGCAGGTGTTCGATCACACGTCGACGCTGCGCTTCATCGAGGCGC GCTTCGGTGTGCGCGAGCCCAATATCTCCGCGTTCCGCCGCGCGGTGTGCGGCGATCTGACGAGCGCGTTCAACTTCGTG CGACCGAACAACGAGCCGCTGCCCACGCTGGCGGGGCGCAAGACCCGGGCTCAGGCCGATGCGCTGCGCGCCGCGCAGCA GCAGATGCCGCAGATCGTGCCGCCTGCGAACGGCCTATTGCCGCGCCAGGAGACAGGCACGCGGCCGTCGCGCGCGTTGC CGTACGAACTGCATGTCAACGCGGTCGCGCGCACGCTCGACGGCACGCTGCGCCTCGTATTCGCCAACACGGGGCAGGCC GCGGCCGTGTTCCACGTCTACGACAAGCTGAATCTGGGCCGCCTGCCGCGCCGATACATGGTCGAGGCCGGCAAGCAGCT CGACGACGTCTGGGCCGCGATGACGGACAACGGCGGCAAGTACGACCTGTGGGTGCTCGGGCCCAACGGCTTGCACCGCC ATTTCACCGGCGATATGAACCGCCTGCGCGCGGGCGGCGCGCCCGTGCCCGAAGTGCGGGTGGAGTACGACCGCCAGCAC GGCAACGTGCAATTGCTGTTGCGTAACGAAGGGGCGCGCGAGTGCGTGTTCACCGTGCGCGCGAAGGCGTACCGCGACGA TGGTCCGTGGACCTTCAAGGTCAAGGGCGGCGCCGAGCGCAAGCATCACTGGAAGCTGGACGGCAGCGGCAATTGGTACG ACTTCGTCGTGACCTGCGACGCCGACACCGGTTACTCGCGCCGCTTCGCCGGGCGGGTGGAAACCGGCGAGCACTCCGTC AGCGATCCGGCGATGGGGTTCGGCGATCGGTTCTGA
Upstream 100 bases:
>100_bases GCTCGATGTGCAACGCCGCCGCAGCCGTCGCCGTGCGCGCCGGCGCATGTGCGCATCGCCGGTTCATCGCTCGGTCAACC CATACCAAGGACTCCGGAAC
Downstream 100 bases:
>100_bases GCTGGGCGAGCCGCCGCGGCCGCGGTCGGTCGCGGCGGGACGATGTGGAGATGGAGGGGACGAAAGAGGAGAACAAAGGC CTGACGCGCACGACAATGGC
Product: non-hemolytic phospholipase C
Products: NA
Alternate protein names: PLC-N; Phosphatidylcholine cholinephosphohydrolase; Phosphatidylcholine-hydrolyzing phospholipase C; PC-PLC [H]
Number of amino acids: Translated: 731; Mature: 731
Protein sequence:
>731_residues MNARRRFLQGTATTGIAAATLAAFPLSIRRALAIPANNRTGTIRDVEHIVILMQENRSFDNYFGTLRGVRGFGDRFGIPL PNALTVWQQRNATGALVLPYHLDGSKGNAQRVSGTPHSWDDGQNAWDGGRMYQWPRYKNTASMGYFRESELPFQFALANA FTICDAYHCSMHAGTNSNRMFMWTGTNGPTGAGVASVVNEWDDIGPSTFGYEWKTYPERLQEAGVSWKVYQNMPDNFTDN ALAGFRQYRRANEASGKPVSNSDKVVSPAYDPASDDVRNPLYKGIANTMPDGGFLGAFKEDIRAGKLPQVSWVVAPAAYS EHPGPSSPVQGAWYIQEVLDALTATPDVWSKTVLLVNFDENDGYFDHVPSPSAPSLNPDGSPAGKTTLPEADIAFERFTH PKPPGTKSQPQPDARVYGPGVRVPMYVISPWSRGGWVNSQVFDHTSTLRFIEARFGVREPNISAFRRAVCGDLTSAFNFV RPNNEPLPTLAGRKTRAQADALRAAQQQMPQIVPPANGLLPRQETGTRPSRALPYELHVNAVARTLDGTLRLVFANTGQA AAVFHVYDKLNLGRLPRRYMVEAGKQLDDVWAAMTDNGGKYDLWVLGPNGLHRHFTGDMNRLRAGGAPVPEVRVEYDRQH GNVQLLLRNEGARECVFTVRAKAYRDDGPWTFKVKGGAERKHHWKLDGSGNWYDFVVTCDADTGYSRRFAGRVETGEHSV SDPAMGFGDRF
Sequences:
>Translated_731_residues MNARRRFLQGTATTGIAAATLAAFPLSIRRALAIPANNRTGTIRDVEHIVILMQENRSFDNYFGTLRGVRGFGDRFGIPL PNALTVWQQRNATGALVLPYHLDGSKGNAQRVSGTPHSWDDGQNAWDGGRMYQWPRYKNTASMGYFRESELPFQFALANA FTICDAYHCSMHAGTNSNRMFMWTGTNGPTGAGVASVVNEWDDIGPSTFGYEWKTYPERLQEAGVSWKVYQNMPDNFTDN ALAGFRQYRRANEASGKPVSNSDKVVSPAYDPASDDVRNPLYKGIANTMPDGGFLGAFKEDIRAGKLPQVSWVVAPAAYS EHPGPSSPVQGAWYIQEVLDALTATPDVWSKTVLLVNFDENDGYFDHVPSPSAPSLNPDGSPAGKTTLPEADIAFERFTH PKPPGTKSQPQPDARVYGPGVRVPMYVISPWSRGGWVNSQVFDHTSTLRFIEARFGVREPNISAFRRAVCGDLTSAFNFV RPNNEPLPTLAGRKTRAQADALRAAQQQMPQIVPPANGLLPRQETGTRPSRALPYELHVNAVARTLDGTLRLVFANTGQA AAVFHVYDKLNLGRLPRRYMVEAGKQLDDVWAAMTDNGGKYDLWVLGPNGLHRHFTGDMNRLRAGGAPVPEVRVEYDRQH GNVQLLLRNEGARECVFTVRAKAYRDDGPWTFKVKGGAERKHHWKLDGSGNWYDFVVTCDADTGYSRRFAGRVETGEHSV SDPAMGFGDRF >Mature_731_residues MNARRRFLQGTATTGIAAATLAAFPLSIRRALAIPANNRTGTIRDVEHIVILMQENRSFDNYFGTLRGVRGFGDRFGIPL PNALTVWQQRNATGALVLPYHLDGSKGNAQRVSGTPHSWDDGQNAWDGGRMYQWPRYKNTASMGYFRESELPFQFALANA FTICDAYHCSMHAGTNSNRMFMWTGTNGPTGAGVASVVNEWDDIGPSTFGYEWKTYPERLQEAGVSWKVYQNMPDNFTDN ALAGFRQYRRANEASGKPVSNSDKVVSPAYDPASDDVRNPLYKGIANTMPDGGFLGAFKEDIRAGKLPQVSWVVAPAAYS EHPGPSSPVQGAWYIQEVLDALTATPDVWSKTVLLVNFDENDGYFDHVPSPSAPSLNPDGSPAGKTTLPEADIAFERFTH PKPPGTKSQPQPDARVYGPGVRVPMYVISPWSRGGWVNSQVFDHTSTLRFIEARFGVREPNISAFRRAVCGDLTSAFNFV RPNNEPLPTLAGRKTRAQADALRAAQQQMPQIVPPANGLLPRQETGTRPSRALPYELHVNAVARTLDGTLRLVFANTGQA AAVFHVYDKLNLGRLPRRYMVEAGKQLDDVWAAMTDNGGKYDLWVLGPNGLHRHFTGDMNRLRAGGAPVPEVRVEYDRQH GNVQLLLRNEGARECVFTVRAKAYRDDGPWTFKVKGGAERKHHWKLDGSGNWYDFVVTCDADTGYSRRFAGRVETGEHSV SDPAMGFGDRF
Specific function: Hydrolyzes phosphatidylserine as well as phosphatidylcholine [H]
COG id: COG3511
COG function: function code M; Phospholipase C
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial phospholipase C family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007312 - InterPro: IPR008475 - InterPro: IPR017767 - InterPro: IPR006311 [H]
Pfam domain/function: PF05506 DUF756; PF04185 Phosphoesterase [H]
EC number: =3.1.4.3 [H]
Molecular weight: Translated: 80823; Mature: 80823
Theoretical pI: Translated: 9.04; Mature: 9.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNARRRFLQGTATTGIAAATLAAFPLSIRRALAIPANNRTGTIRDVEHIVILMQENRSFD CCCHHHHHHCCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCCCEEEEEEEEEEECCCCHH NYFGTLRGVRGFGDRFGIPLPNALTVWQQRNATGALVLPYHLDGSKGNAQRVSGTPHSWD HHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCEEEEEEEEECCCCCCCEECCCCCCCCC DGQNAWDGGRMYQWPRYKNTASMGYFRESELPFQFALANAFTICDAYHCSMHAGTNSNRM CCCCCCCCCCEEECCCCCCCCCCCEEECCCCCEEEHHHHHHHHHHHHEEEEECCCCCCEE FMWTGTNGPTGAGVASVVNEWDDIGPSTFGYEWKTYPERLQEAGVSWKVYQNMPDNFTDN EEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCHH ALAGFRQYRRANEASGKPVSNSDKVVSPAYDPASDDVRNPLYKGIANTMPDGGFLGAFKE HHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCCEEHHHHH DIRAGKLPQVSWVVAPAAYSEHPGPSSPVQGAWYIQEVLDALTATPDVWSKTVLLVNFDE HHHCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEECC NDGYFDHVPSPSAPSLNPDGSPAGKTTLPEADIAFERFTHPKPPGTKSQPQPDARVYGPG CCCEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEECCC VRVPMYVISPWSRGGWVNSQVFDHTSTLRFIEARFGVREPNISAFRRAVCGDLTSAFNFV CCEEEEEECCCCCCCCCCCHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHC RPNNEPLPTLAGRKTRAQADALRAAQQQMPQIVPPANGLLPRQETGTRPSRALPYELHVN CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHH AVARTLDGTLRLVFANTGQAAAVFHVYDKLNLGRLPRRYMVEAGKQLDDVWAAMTDNGGK HHHHHCCCEEEEEEECCCCEEEEEEEEHHCCCCCCCHHHHHHHCCHHHHHHHHHCCCCCE YDLWVLGPNGLHRHFTGDMNRLRAGGAPVPEVRVEYDRQHGNVQLLLRNEGARECVFTVR EEEEEECCCCCCCCCCCCHHHHHCCCCCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEE AKAYRDDGPWTFKVKGGAERKHHWKLDGSGNWYDFVVTCDADTGYSRRFAGRVETGEHSV HHEECCCCCEEEEECCCCCCCCEEEECCCCCEEEEEEEECCCCCCCHHCCCCCCCCCCCC SDPAMGFGDRF CCCCCCCCCCC >Mature Secondary Structure MNARRRFLQGTATTGIAAATLAAFPLSIRRALAIPANNRTGTIRDVEHIVILMQENRSFD CCCHHHHHHCCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCCCEEEEEEEEEEECCCCHH NYFGTLRGVRGFGDRFGIPLPNALTVWQQRNATGALVLPYHLDGSKGNAQRVSGTPHSWD HHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCEEEEEEEEECCCCCCCEECCCCCCCCC DGQNAWDGGRMYQWPRYKNTASMGYFRESELPFQFALANAFTICDAYHCSMHAGTNSNRM CCCCCCCCCCEEECCCCCCCCCCCEEECCCCCEEEHHHHHHHHHHHHEEEEECCCCCCEE FMWTGTNGPTGAGVASVVNEWDDIGPSTFGYEWKTYPERLQEAGVSWKVYQNMPDNFTDN EEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCHH ALAGFRQYRRANEASGKPVSNSDKVVSPAYDPASDDVRNPLYKGIANTMPDGGFLGAFKE HHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCCEEHHHHH DIRAGKLPQVSWVVAPAAYSEHPGPSSPVQGAWYIQEVLDALTATPDVWSKTVLLVNFDE HHHCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEECC NDGYFDHVPSPSAPSLNPDGSPAGKTTLPEADIAFERFTHPKPPGTKSQPQPDARVYGPG CCCEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEECCC VRVPMYVISPWSRGGWVNSQVFDHTSTLRFIEARFGVREPNISAFRRAVCGDLTSAFNFV CCEEEEEECCCCCCCCCCCHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHC RPNNEPLPTLAGRKTRAQADALRAAQQQMPQIVPPANGLLPRQETGTRPSRALPYELHVN CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHH AVARTLDGTLRLVFANTGQAAAVFHVYDKLNLGRLPRRYMVEAGKQLDDVWAAMTDNGGK HHHHHCCCEEEEEEECCCCEEEEEEEEHHCCCCCCCHHHHHHHCCHHHHHHHHHCCCCCE YDLWVLGPNGLHRHFTGDMNRLRAGGAPVPEVRVEYDRQHGNVQLLLRNEGARECVFTVR EEEEEECCCCCCCCCCCCHHHHHCCCCCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEE AKAYRDDGPWTFKVKGGAERKHHWKLDGSGNWYDFVVTCDADTGYSRRFAGRVETGEHSV HHEECCCCCEEEEECCCCCCCCEEEECCCCCEEEEEEEECCCCCCCHHCCCCCCCCCCCC SDPAMGFGDRF CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2120196; 10984043 [H]