| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is 126445692
Identifier: 126445692
GI number: 126445692
Start: 533489
End: 534742
Strand: Reverse
Name: 126445692
Synonym: BMA10247_A0586
Alternate gene names: NA
Gene position: 534742-533489 (Counterclockwise)
Preceding gene: 126447689
Following gene: 126446298
Centisome position: 22.73
GC content: 70.73
Gene sequence:
>1254_bases TTGACTTCAGTCGCGCCACCCTCGGCGACAAGCGAAGCGGTCAGCCATCGCAACACCGCTGTGCTCGTCGTCTTCACCGC ATTGACGAATCTCGCCGATGGCGTGACGAAGGTCGCGCTGCCGCTGATGGCGACCGCACTCACGCACTCGCCCGCGCGCA TCTCGGGCGTATCACTGACACTGACGCTGCCCTGGCTGCTCGTCGCGCTTCACGTCGGCGTGCTGGTGGACCGCTTCGAT CGCCGCACGCTGCTGTGGCTCGCGAACGCGGCGCGCATGGCCGCCATGGCGCTGCTCATCGCGCTGCTGCCATCCGGCCG CGTCACGCTGCCGGTGCTGTACGCGAGCGGCCTGACGCTCGGCCTCGCCGAGGTCGTCGCGCTGACTTCCGCGGCCGCCT TGATTCCGGACGCCGTCGCCCCTTCGAGCCGCGAGCGCGCGAACGCATGGATCGCCGGCGCGGAGACCGTCTGCAACGAA TTCTGCGGCCCGCTCACCGGCGGCATGCTGGTCGCGGCCGGCACGGCGATCGCGCTCGGCGCCGTTGCCGTCGGCTACTT CGGCGGCGGCGTCGCGCTGTTTTTCCTGATCGGGCGGTTCCGCGTCGCGCATGCGCCGCATGGGCGGCCGCCGCCCGTTC GCCTGCAGATTGCCGAAGGGCTCGGATGCCTGTGGCACCAGCCGTTGCTCCGGCTGATGGCCGTCGCGCTGACGGTGCTC TGCATGTGCTGGGGCGCATGGCTCGCGCTGATGCCGCTGTTCGCGACGACGGTGCTCGGCCTCGACTCGCGCGGCTATGG CGTGACGGTCAGCGCGCTCGGCGTCGGCGGCTTCGTCGGCGCGCTGAGCGTCACCTTGCTGAACCGCCGCTTCGGGCGGC GCACCGTCATGCTCACGGATCTGCTCGGCACCTTCGCGATGATGGCCGTACCGGTGCTGAGCACGAACCTATGGGCCGTC GCGGCAAGCGCATTCGCGGGCGGCCTGGGCGGCACGCTGTGGACGGTCAATGCGAGGACGATCAGCCAGCATCTCGTGCC GGGGCCGCTGCTCGGCCGCTACAATGCGGCGGCCCGCCTGTTCAGTTGGGGAGCGATGCCGATCGGCGCGGGCTTTGCCG GCGCGATCGCGGAACTGCTGGGCATGCGCGCCGCGTTCGCGGCGCTCGCCGTCGCGGCCTTGCTGTTGATCGTGCCGTTC CTGCGCGTCGCTTCGGCGCAAGCGCTGCGAATCGGCCCCGAACGCCGACATTGA
Upstream 100 bases:
>100_bases CGCTCGGTTATCGATTGCAGGCGTAGCGCTCGCCGCATGGCCGGCCGATTCGTCCCCCTCGACACGGCGAGCGCGCGCCG CCACCCGCCCGGAGGCCATG
Downstream 100 bases:
>100_bases ATCCGTCGGCAACGCTTCGGCGCATCGATCGTCAAGATAACGAAGCAAATGAAACGCTGCGCCGCCGGTGCACGCCTCGC CGTCTCCAGCCCGTTGCAGC
Product: putative transporter
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Facilitator MFS1 Protein; Antibiotic Efflux Protein; Arabinose Efflux Permease Family Protein; Facilitator Superfamily Transporter; Export Protein; Integral Membrane Efflux Protein; Inner Membrane Protein; MFS Transporter; MFS Family Multidrug Resistance Protein; Facilitator Superfamily Permease; MFS Superfamily Transporter
Number of amino acids: Translated: 417; Mature: 416
Protein sequence:
>417_residues MTSVAPPSATSEAVSHRNTAVLVVFTALTNLADGVTKVALPLMATALTHSPARISGVSLTLTLPWLLVALHVGVLVDRFD RRTLLWLANAARMAAMALLIALLPSGRVTLPVLYASGLTLGLAEVVALTSAAALIPDAVAPSSRERANAWIAGAETVCNE FCGPLTGGMLVAAGTAIALGAVAVGYFGGGVALFFLIGRFRVAHAPHGRPPPVRLQIAEGLGCLWHQPLLRLMAVALTVL CMCWGAWLALMPLFATTVLGLDSRGYGVTVSALGVGGFVGALSVTLLNRRFGRRTVMLTDLLGTFAMMAVPVLSTNLWAV AASAFAGGLGGTLWTVNARTISQHLVPGPLLGRYNAAARLFSWGAMPIGAGFAGAIAELLGMRAAFAALAVAALLLIVPF LRVASAQALRIGPERRH
Sequences:
>Translated_417_residues MTSVAPPSATSEAVSHRNTAVLVVFTALTNLADGVTKVALPLMATALTHSPARISGVSLTLTLPWLLVALHVGVLVDRFD RRTLLWLANAARMAAMALLIALLPSGRVTLPVLYASGLTLGLAEVVALTSAAALIPDAVAPSSRERANAWIAGAETVCNE FCGPLTGGMLVAAGTAIALGAVAVGYFGGGVALFFLIGRFRVAHAPHGRPPPVRLQIAEGLGCLWHQPLLRLMAVALTVL CMCWGAWLALMPLFATTVLGLDSRGYGVTVSALGVGGFVGALSVTLLNRRFGRRTVMLTDLLGTFAMMAVPVLSTNLWAV AASAFAGGLGGTLWTVNARTISQHLVPGPLLGRYNAAARLFSWGAMPIGAGFAGAIAELLGMRAAFAALAVAALLLIVPF LRVASAQALRIGPERRH >Mature_416_residues TSVAPPSATSEAVSHRNTAVLVVFTALTNLADGVTKVALPLMATALTHSPARISGVSLTLTLPWLLVALHVGVLVDRFDR RTLLWLANAARMAAMALLIALLPSGRVTLPVLYASGLTLGLAEVVALTSAAALIPDAVAPSSRERANAWIAGAETVCNEF CGPLTGGMLVAAGTAIALGAVAVGYFGGGVALFFLIGRFRVAHAPHGRPPPVRLQIAEGLGCLWHQPLLRLMAVALTVLC MCWGAWLALMPLFATTVLGLDSRGYGVTVSALGVGGFVGALSVTLLNRRFGRRTVMLTDLLGTFAMMAVPVLSTNLWAVA ASAFAGGLGGTLWTVNARTISQHLVPGPLLGRYNAAARLFSWGAMPIGAGFAGAIAELLGMRAAFAALAVAALLLIVPFL RVASAQALRIGPERRH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43141; Mature: 43010
Theoretical pI: Translated: 11.64; Mature: 11.64
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSVAPPSATSEAVSHRNTAVLVVFTALTNLADGVTKVALPLMATALTHSPARISGVSLT CCCCCCCCCHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE LTLPWLLVALHVGVLVDRFDRRTLLWLANAARMAAMALLIALLPSGRVTLPVLYASGLTL HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHCCCHH GLAEVVALTSAAALIPDAVAPSSRERANAWIAGAETVCNEFCGPLTGGMLVAAGTAIALG HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHEECHHHHHHHHCCHHCCCHHHHHHHHHHHH AVAVGYFGGGVALFFLIGRFRVAHAPHGRPPPVRLQIAEGLGCLWHQPLLRLMAVALTVL HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHH CMCWGAWLALMPLFATTVLGLDSRGYGVTVSALGVGGFVGALSVTLLNRRFGRRTVMLTD HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCHHHHHHH LLGTFAMMAVPVLSTNLWAVAASAFAGGLGGTLWTVNARTISQHLVPGPLLGRYNAAARL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHCCCCCCCCCHHHHHHH FSWGAMPIGAGFAGAIAELLGMRAAFAALAVAALLLIVPFLRVASAQALRIGPERRH HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCC >Mature Secondary Structure TSVAPPSATSEAVSHRNTAVLVVFTALTNLADGVTKVALPLMATALTHSPARISGVSLT CCCCCCCCHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE LTLPWLLVALHVGVLVDRFDRRTLLWLANAARMAAMALLIALLPSGRVTLPVLYASGLTL HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHCCCHH GLAEVVALTSAAALIPDAVAPSSRERANAWIAGAETVCNEFCGPLTGGMLVAAGTAIALG HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHEECHHHHHHHHCCHHCCCHHHHHHHHHHHH AVAVGYFGGGVALFFLIGRFRVAHAPHGRPPPVRLQIAEGLGCLWHQPLLRLMAVALTVL HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHH CMCWGAWLALMPLFATTVLGLDSRGYGVTVSALGVGGFVGALSVTLLNRRFGRRTVMLTD HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCHHHHHHH LLGTFAMMAVPVLSTNLWAVAASAFAGGLGGTLWTVNARTISQHLVPGPLLGRYNAAARL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHCCCCCCCCCHHHHHHH FSWGAMPIGAGFAGAIAELLGMRAAFAALAVAALLLIVPFLRVASAQALRIGPERRH HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA