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The map label for this gene is glxA [H]

Identifier: 126445685

GI number: 126445685

Start: 231230

End: 232270

Strand: Reverse

Name: glxA [H]

Synonym: BMA10247_A0268

Alternate gene names: 126445685

Gene position: 232270-231230 (Counterclockwise)

Preceding gene: 126446744

Following gene: 126447438

Centisome position: 9.87

GC content: 73.68

Gene sequence:

>1041_bases
ATGGCGGATATGCCAAAGTCCCCACAGTTCCCGCCAACGCCATCGGCGGCCGCGCCCGCCGCCGCGCGCCGCGCGGTGCA
CGTGCTCGCGTTCGACGATGTGCAGTTGCTCGACGTCACCGGGCCGCTGCAAGTGTTCGCGAGCGCGAACGATTTCGCCG
CGCGCCGCGGGCTCGCGATTCCGTACGCGCCGCGCGTCGTCGCCGCCCACGCGCCTTCGGTGATGTCGTCGGCCGGGCTC
GCGTTCGCCGCCGCGCCGCTGCCCGCCGCGCGCGAGCCGTCCGATACGCTGATCGTCGCGGGCGGCTGCGGCGTCCACGG
CGCGGCGCGCGATCCGCGGCTCGTCGACTGGGTGCGCCGGCGCGCGGCGTACGCGCGGCGCATCGCGTCGGTGTGCTCGG
GCGCGTTCGTGCTCGCGGCGGCGGGGCTGCTGGGCGGACGCCGCGTCGTCACGCACTGGTCGCGCTGCGACGAGCTCGCG
CAACGCTATCCCGACGTGCGCGTCGAGCCCGATCCCATTTTCATCCGCGACGGCAACGTCTGGACGTCGGCAGGCGTCAC
GGCCGGCATCGATCTCGCGCTCGCGCTCGTCGAGGACGACCTCGGCCGCGCGCTGGCGCTCGACGTCGCGCGGTATCTCG
TCGTGTTTCTGAAGCGCCCGGGCGGCCAGGCGCAATTCAGCGCCGCGCTGTCGCTGCAGCACGAGGGCGGCTGCTTCGAC
GAACTGCACGCATGGGCGGCCGCGAATCTCGGCGCGGACTTGTCGGTCGCGGCGCTCGCCGCGCGCGCCGGCATGAGCGA
GCGCAGTTTCATGCGCCGCTACCGCGAAGCGACCGGCAGGACGCCCGCGCGGGCGATCGAGCAGATGCGCGTCGAAGCCG
CGCGCAACCTGCTCGCCGACGCGCCGCTGCCGATCAAGCGGATCGCCGCGCGCTGCGGATTCGGCAGCGAGGAAACGATG
CGCCGCAGTTTCCTGCGCATGCTCGGCGTGGCACCGCAGGCCTATCGCGAGCGGTTCGCGACGAATCGGCGAGGCGTCTG
A

Upstream 100 bases:

>100_bases
TCCTCCAGTTCATCAACGTCACGTCAACATCATGAGCGTTGCGCCGGCTCGCGCCGACCGCACCGGCGCGATGGACAAAC
CGACTGTACGCAATTACCGT

Downstream 100 bases:

>100_bases
GCGCCATTTGCGTCGGCGCGACGCGTTGGCGTTGGCGTTGGCGTTGGCGTTGGCATTGGCACTGGCACTGGCATTGGCTT
CGGCTTCGGCTTCGGCTTCG

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 345

Protein sequence:

>346_residues
MADMPKSPQFPPTPSAAAPAAARRAVHVLAFDDVQLLDVTGPLQVFASANDFAARRGLAIPYAPRVVAAHAPSVMSSAGL
AFAAAPLPAAREPSDTLIVAGGCGVHGAARDPRLVDWVRRRAAYARRIASVCSGAFVLAAAGLLGGRRVVTHWSRCDELA
QRYPDVRVEPDPIFIRDGNVWTSAGVTAGIDLALALVEDDLGRALALDVARYLVVFLKRPGGQAQFSAALSLQHEGGCFD
ELHAWAAANLGADLSVAALAARAGMSERSFMRRYREATGRTPARAIEQMRVEAARNLLADAPLPIKRIAARCGFGSEETM
RRSFLRMLGVAPQAYRERFATNRRGV

Sequences:

>Translated_346_residues
MADMPKSPQFPPTPSAAAPAAARRAVHVLAFDDVQLLDVTGPLQVFASANDFAARRGLAIPYAPRVVAAHAPSVMSSAGL
AFAAAPLPAAREPSDTLIVAGGCGVHGAARDPRLVDWVRRRAAYARRIASVCSGAFVLAAAGLLGGRRVVTHWSRCDELA
QRYPDVRVEPDPIFIRDGNVWTSAGVTAGIDLALALVEDDLGRALALDVARYLVVFLKRPGGQAQFSAALSLQHEGGCFD
ELHAWAAANLGADLSVAALAARAGMSERSFMRRYREATGRTPARAIEQMRVEAARNLLADAPLPIKRIAARCGFGSEETM
RRSFLRMLGVAPQAYRERFATNRRGV
>Mature_345_residues
ADMPKSPQFPPTPSAAAPAAARRAVHVLAFDDVQLLDVTGPLQVFASANDFAARRGLAIPYAPRVVAAHAPSVMSSAGLA
FAAAPLPAAREPSDTLIVAGGCGVHGAARDPRLVDWVRRRAAYARRIASVCSGAFVLAAAGLLGGRRVVTHWSRCDELAQ
RYPDVRVEPDPIFIRDGNVWTSAGVTAGIDLALALVEDDLGRALALDVARYLVVFLKRPGGQAQFSAALSLQHEGGCFDE
LHAWAAANLGADLSVAALAARAGMSERSFMRRYREATGRTPARAIEQMRVEAARNLLADAPLPIKRIAARCGFGSEETMR
RSFLRMLGVAPQAYRERFATNRRGV

Specific function: Unknown

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786496, Length=96, Percent_Identity=33.3333333333333, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 36930; Mature: 36799

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: PS01124 HTH_ARAC_FAMILY_2 ; PS00589 PTS_HPR_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADMPKSPQFPPTPSAAAPAAARRAVHVLAFDDVQLLDVTGPLQVFASANDFAARRGLAI
CCCCCCCCCCCCCCCCCCCHHHHHEEEEEEECCEEEEECCCHHHHHCCCCHHHHHCCCCC
PYAPRVVAAHAPSVMSSAGLAFAAAPLPAAREPSDTLIVAGGCGVHGAARDPRLVDWVRR
CCCCCHHHHCCCHHHHHCCCCEEECCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHH
RAAYARRIASVCSGAFVLAAAGLLGGRRVVTHWSRCDELAQRYPDVRVEPDPIFIRDGNV
HHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEECCCEEEEECCCE
WTSAGVTAGIDLALALVEDDLGRALALDVARYLVVFLKRPGGQAQFSAALSLQHEGGCFD
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEECCCCCCHH
ELHAWAAANLGADLSVAALAARAGMSERSFMRRYREATGRTPARAIEQMRVEAARNLLAD
HHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC
APLPIKRIAARCGFGSEETMRRSFLRMLGVAPQAYRERFATNRRGV
CCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCC
>Mature Secondary Structure 
ADMPKSPQFPPTPSAAAPAAARRAVHVLAFDDVQLLDVTGPLQVFASANDFAARRGLAI
CCCCCCCCCCCCCCCCCCHHHHHEEEEEEECCEEEEECCCHHHHHCCCCHHHHHCCCCC
PYAPRVVAAHAPSVMSSAGLAFAAAPLPAAREPSDTLIVAGGCGVHGAARDPRLVDWVRR
CCCCCHHHHCCCHHHHHCCCCEEECCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHH
RAAYARRIASVCSGAFVLAAAGLLGGRRVVTHWSRCDELAQRYPDVRVEPDPIFIRDGNV
HHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEECCCEEEEECCCE
WTSAGVTAGIDLALALVEDDLGRALALDVARYLVVFLKRPGGQAQFSAALSLQHEGGCFD
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEECCCCCCHH
ELHAWAAANLGADLSVAALAARAGMSERSFMRRYREATGRTPARAIEQMRVEAARNLLAD
HHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC
APLPIKRIAARCGFGSEETMRRSFLRMLGVAPQAYRERFATNRRGV
CCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]